RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 BACH2Q9BYV9 841 aa16.35■□□□□ 0.21
SRSF1-202ENST00000578430 TMX4Q9H1E5 349 aaPredicted RBP16.35■□□□□ 0.21
SRSF1-202ENST00000578430 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
SRSF1-202ENST00000578430 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
SRSF1-202ENST00000578430 COL11A2P13942 1736 aaPredicted RBP16.35■□□□□ 0.21
SRSF1-202ENST00000578430 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
SRSF1-202ENST00000578430 ZBTB22O15209 634 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 CDC45O75419 566 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 KCNJ4P48050 445 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 TGFB2P61812 414 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 C8orf34Q49A92 452 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 TTC39AQ5SRH9 613 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.211e-19■■□□□ 13.4
SRSF1-202ENST00000578430 EVI5LQ96CN4 794 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 HAUS7Q99871 368 aa16.34■□□□□ 0.21
SRSF1-202ENST00000578430 LRRC37AA6NMS7 1700 aa16.33■□□□□ 0.21
SRSF1-202ENST00000578430 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
SRSF1-202ENST00000578430 ATP2B4P23634 1241 aa16.33■□□□□ 0.2
SRSF1-202ENST00000578430 ADORA1P30542 326 aa16.33■□□□□ 0.2
SRSF1-202ENST00000578430 CASC1Q6TDU7 716 aa16.33■□□□□ 0.2
SRSF1-202ENST00000578430 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
SRSF1-202ENST00000578430 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
SRSF1-202ENST00000578430 ANKIB1Q9P2G1 1089 aa16.33■□□□□ 0.2
SRSF1-202ENST00000578430 ZNF804BA4D1E1 1349 aa16.33■□□□□ 0.2
SRSF1-202ENST00000578430 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
SRSF1-202ENST00000578430 ARID4AP29374 1257 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-202ENST00000578430 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
SRSF1-202ENST00000578430 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
SRSF1-202ENST00000578430 CCDC102BQ68D86 513 aa16.32■□□□□ 0.2
SRSF1-202ENST00000578430 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
SRSF1-202ENST00000578430 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
SRSF1-202ENST00000578430 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
SRSF1-202ENST00000578430 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
SRSF1-202ENST00000578430 GPR162Q16538 588 aa16.31■□□□□ 0.2
SRSF1-202ENST00000578430 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
SRSF1-202ENST00000578430 GGA1Q9UJY5 639 aa16.31■□□□□ 0.2
SRSF1-202ENST00000578430 CD2APQ9Y5K6 639 aa16.31■□□□□ 0.2
SRSF1-202ENST00000578430 RFX7Q2KHR2 1363 aa16.3■□□□□ 0.2
SRSF1-202ENST00000578430 HIP1O00291 1037 aa16.3■□□□□ 0.2
SRSF1-202ENST00000578430 CHRNA5P30532 468 aa16.3■□□□□ 0.2
SRSF1-202ENST00000578430 GPSM2P81274 684 aa16.3■□□□□ 0.2
SRSF1-202ENST00000578430 PRPF40BQ6NWY9 871 aaKnown RBP16.3■□□□□ 0.2
SRSF1-202ENST00000578430 SEMA3EO15041 775 aa16.29■□□□□ 0.2
SRSF1-202ENST00000578430 PHKA1P46020 1223 aa16.29■□□□□ 0.2
SRSF1-202ENST00000578430 LRRFIP1Q32MZ4 808 aaKnown RBP16.29■□□□□ 0.2
SRSF1-202ENST00000578430 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
SRSF1-202ENST00000578430 FBXO33Q7Z6M2 555 aa16.29■□□□□ 0.2
SRSF1-202ENST00000578430 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
SRSF1-202ENST00000578430 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
SRSF1-202ENST00000578430 SNAP23O00161 211 aa16.28■□□□□ 0.2
SRSF1-202ENST00000578430 UFL1O94874 794 aa16.28■□□□□ 0.2
SRSF1-202ENST00000578430 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
SRSF1-202ENST00000578430 TTF1Q15361 905 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-202ENST00000578430 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
SRSF1-202ENST00000578430 MPNDQ8N594 471 aa16.28■□□□□ 0.2
SRSF1-202ENST00000578430 FAM84BQ96KN1 310 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-202ENST00000578430 PAG1Q9NWQ8 432 aa16.28■□□□□ 0.2
SRSF1-202ENST00000578430 AK9Q5TCS8 1911 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 PDS5AQ29RF7 1337 aaKnown RBP16.27■□□□□ 0.2
SRSF1-202ENST00000578430 IRS2Q9Y4H2 1338 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 MAP4K4O95819 1239 aaPredicted RBP16.27■□□□□ 0.2
SRSF1-202ENST00000578430 DPEP1P16444 411 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 CHMLP26374 656 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 HIBADHP31937 336 aaKnown RBP16.27■□□□□ 0.2
SRSF1-202ENST00000578430 BCAMP50895 628 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
SRSF1-202ENST00000578430 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 C7orf43Q8WVR3 580 aa16.27■□□□□ 0.2
SRSF1-202ENST00000578430 DNAJC2Q99543 621 aaKnown RBP16.27■□□□□ 0.2
SRSF1-202ENST00000578430 LTBP1Q14766 1721 aa16.27■□□□□ 0.19
SRSF1-202ENST00000578430 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 IGSF3O75054 1194 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 KCNA3P22001 575 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 MCAMP43121 646 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 ZNF804AQ7Z570 1209 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 EYA3Q99504 573 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 DENND2AQ9ULE3 1009 aa16.26■□□□□ 0.19
SRSF1-202ENST00000578430 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 GOLIM4O00461 696 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 GYG1P46976 350 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
SRSF1-202ENST00000578430 SPATA5Q8NB90 893 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
SRSF1-202ENST00000578430 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 AKAP11Q9UKA4 1901 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
SRSF1-202ENST00000578430 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
SRSF1-202ENST00000578430 ZAP70P43403 619 aa16.24■□□□□ 0.19
SRSF1-202ENST00000578430 RASGRF1Q13972 1273 aa16.24■□□□□ 0.19
SRSF1-202ENST00000578430 SCARF1Q14162 830 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms