RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 AKAP2Q9Y2D5 859 aa13.51□□□□□ -0.25
GGA3-205ENST00000578348 SH3TC1Q8TE82 1336 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 KAT6BQ8WYB5 2073 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 TAF5LO75529 589 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 GPTP24298 496 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 TIMM10P62072 90 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 TAF7LQ5H9L4 462 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
GGA3-205ENST00000578348 SPC24Q8NBT2 197 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 MYRIPQ8NFW9 859 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 PAG1Q9NWQ8 432 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 LIG1P18858 919 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 PDCP20941 246 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 USPL1Q5W0Q7 1092 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
GGA3-205ENST00000578348 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
GGA3-205ENST00000578348 CTSWP56202 376 aa13.49□□□□□ -0.25
GGA3-205ENST00000578348 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
GGA3-205ENST00000578348 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
GGA3-205ENST00000578348 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
GGA3-205ENST00000578348 CCDC87Q9NVE4 849 aa13.49□□□□□ -0.25
GGA3-205ENST00000578348 IFIT1P09914 478 aaKnown RBP13.48□□□□□ -0.25
GGA3-205ENST00000578348 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
GGA3-205ENST00000578348 MAP3K11Q16584 847 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 PRIMPOLQ96LW4 560 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 PODXL2Q9NZ53 605 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 TFIP11Q9UBB9 837 aaKnown RBP13.48□□□□□ -0.25
GGA3-205ENST00000578348 NDUFB9Q9Y6M9 179 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
GGA3-205ENST00000578348 RIC1Q4ADV7 1423 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 GOLGA6L4A6NEF3 574 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 GOLIM4O00461 696 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 MTERF4Q7Z6M4 381 aaKnown RBP13.48□□□□□ -0.25
GGA3-205ENST00000578348 CKAP2LQ8IYA6 745 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 ZNF34Q8IZ26 560 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 SPATA32Q96LK8 384 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 HELLSQ9NRZ9 838 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 CCDC9Q9Y3X0 531 aaKnown RBP13.48□□□□□ -0.25
GGA3-205ENST00000578348 LRP5O75197 1615 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 ELP1O95163 1332 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 ABCC12Q96J65 1359 aa13.48□□□□□ -0.25
GGA3-205ENST00000578348 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
GGA3-205ENST00000578348 PDIA4P13667 645 aaKnown RBP13.47□□□□□ -0.25
GGA3-205ENST00000578348 KRT32Q14532 448 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
GGA3-205ENST00000578348 TTLL11Q8NHH1 800 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 FAM200AQ8TCP9 573 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 TSC1Q92574 1164 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 ALDH8A1Q9H2A2 487 aaPredicted RBP13.47□□□□□ -0.25
GGA3-205ENST00000578348 KCNF1Q9H3M0 494 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 SPTLC3Q9NUV7 552 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 TRMT112Q9UI30 125 aaKnown RBP13.47□□□□□ -0.25
GGA3-205ENST00000578348 LOC102724428A0A0B4J2F2 783 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 PDE8AO60658 829 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 SIK1P57059 783 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
GGA3-205ENST00000578348 TYRO3Q06418 890 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 CCDC158Q5M9N0 1113 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 LUZP1Q86V48 1076 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
GGA3-205ENST00000578348 AK7Q96M32 723 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 TNMDQ9H2S6 317 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 MRVI1Q9Y6F6 885 aa13.47□□□□□ -0.25
GGA3-205ENST00000578348 ITGA6P23229 1130 aa13.46□□□□□ -0.25
GGA3-205ENST00000578348 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
GGA3-205ENST00000578348 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.25
GGA3-205ENST00000578348 SYNE4Q8N205 404 aa13.46□□□□□ -0.25
GGA3-205ENST00000578348 CCDC85AQ96PX6 553 aaPredicted RBP13.46□□□□□ -0.25
GGA3-205ENST00000578348 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.25
GGA3-205ENST00000578348 PYCARDQ9ULZ3 195 aa13.46□□□□□ -0.25
GGA3-205ENST00000578348 UBN2Q6ZU65 1347 aa13.46□□□□□ -0.25
GGA3-205ENST00000578348 A0A0G2JS52 829 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 GOLGA6L6A8MZA4 724 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.26
GGA3-205ENST00000578348 TTC39AQ5SRH9 613 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 ZMYM1Q5SVZ6 1142 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 GORABQ5T7V8 394 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 KIAA1524Q8TCG1 905 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 XAGE2Q96GT9 111 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 GREM2Q9H772 168 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 RIPOR2Q9Y4F9 1068 aa13.46□□□□□ -0.26
GGA3-205ENST00000578348 COL5A3P25940 1745 aaPredicted RBP13.45□□□□□ -0.26
GGA3-205ENST00000578348 JAK2O60674 1132 aa13.45□□□□□ -0.26
GGA3-205ENST00000578348 CHGBP05060 677 aa13.45□□□□□ -0.26
GGA3-205ENST00000578348 CCDC129Q6ZRS4 1044 aa13.45□□□□□ -0.26
GGA3-205ENST00000578348 LEO1Q8WVC0 666 aaPredicted RBP13.45□□□□□ -0.26
GGA3-205ENST00000578348 LAMB2P55268 1798 aa13.45□□□□□ -0.26
GGA3-205ENST00000578348 RNF113AO15541 343 aaKnown RBP13.44□□□□□ -0.26
GGA3-205ENST00000578348 ATP2B3Q16720 1220 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 ANO6Q4KMQ2 910 aa13.44□□□□□ -0.26
GGA3-205ENST00000578348 METTL24Q5JXM2 366 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms