RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 RASSF4Q9H2L5 321 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 SUV39H2Q9H5I1 410 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 LIN7BQ9HAP6 207 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 LATS2Q9NRM7 1088 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 WWC3Q9ULE0 1092 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 SPG7Q9UQ90 795 aa3.86□□□□□ -1.79
PTP4A1-204ENST00000578299 NFKBIEO00221 500 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 PDE2AO00408 941 aaPredicted RBP3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 GIPC1O14908 333 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 ACPPP15309 386 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 PTPRAP18433 802 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 IRS1P35568 1242 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 AFF1P51825 1210 aaKnown RBP3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 GRIK5Q16478 980 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 LINC00114Q6XXX2 140 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 PODNQ7Z5L7 613 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 NXPE3Q969Y0 559 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 SETDB2Q96T68 719 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 POP1Q99575 1024 aaKnown RBP3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 BHLHE41Q9C0J9 482 aaPredicted RBP3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 BCL11AQ9H165 835 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 EHD4Q9H223 541 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 PPP4R2Q9NY27 417 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 MKL2Q9ULH7 1088 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 ADAMTS8Q9UP79 889 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 TRIM33Q9UPN9 1127 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 TRAK1Q9UPV9 953 aa3.85□□□□□ -1.79
PTP4A1-204ENST00000578299 SPDYE3A6NKU9 549 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 GNB5O14775 395 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 NID1P14543 1247 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 CDC27P30260 824 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 GNA15P30679 374 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 ITGAEP38570 1179 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 SNRPNP63162 240 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 GRM2Q14416 872 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 MSL1Q68DK7 614 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 GDF6Q6KF10 455 aaPredicted RBP3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 PRPF40BQ6NWY9 871 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 PI16Q6UXB8 463 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 C8orf86Q6ZUL3 223 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 WFDC8Q8IUA0 241 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 CCNJLQ8IV13 435 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 BEND7Q8N7W2 519 aaPredicted RBP3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 GIPC2Q8TF65 315 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 SCARF2Q96GP6 870 aaPredicted RBP3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 HHIPQ96QV1 700 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 TCF12Q99081 682 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 DUSP9Q99956 384 aaKnown RBP3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 SRCIN1Q9C0H9 1055 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 ADAM19Q9H013 955 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 MUC3BQ9H195 1237 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 STK17AQ9UEE5 414 aa3.84□□□□□ -1.79
PTP4A1-204ENST00000578299 RBM47A0AV96 593 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 TRPA1O75762 1119 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 XRCC5P13010 732 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 BAG6P46379 1132 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 DAB2P98082 770 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 XPCQ01831 940 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 COL9A3Q14050 684 aaPredicted RBP3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 IL22RA1Q8N6P7 574 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 ASAP3Q8TDY4 903 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 BSNDQ8WZ55 320 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 BCO2Q9BYV7 579 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 LACRTQ9GZZ8 138 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 ZFYVE1Q9HBF4 777 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 NOP53Q9NZM5 478 aaKnown RBP3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 PARP2Q9UGN5 583 aa3.83□□□□□ -1.8
PTP4A1-204ENST00000578299 A0A096LPE4 126 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 TMEM238LA0A1B0GVL6 79 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 A0A1W2PPZ6 126 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 ZNF16P17020 682 aaPredicted RBP3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 GSTT1P30711 240 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 GRIA4P48058 902 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 CABP4P57796 275 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 RAC1P63000 192 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 TAGLNQ01995 201 aaKnown RBP3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 PTPN12Q05209 780 aaKnown RBP3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 PSMD2Q13200 908 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 FAM117BQ6P1L5 589 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 NXPE4Q6UWF7 544 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 ILDR2Q71H61 639 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 TMC4Q7Z404 712 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 MAP4K3Q8IVH8 894 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 DMRTC2Q8IXT2 367 aaPredicted RBP3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 DTWD1Q8N5C7 304 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 GLIS3Q8NEA6 775 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 FOXD4L4Q8WXT5 416 aaPredicted RBP3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 TRIM11Q96F44 468 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 PLVAPQ9BX97 442 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 OSBPL7Q9BZF2 842 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 C12orf49Q9H741 205 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 SRA1Q9HD15 236 aaKnown RBP3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 MRS2Q9HD23 443 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 ABCB6Q9NP58 842 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 SOX13Q9UN79 622 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 PPME1Q9Y570 386 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 AK5Q9Y6K8 562 aa3.82□□□□□ -1.8
PTP4A1-204ENST00000578299 CNTNAP5Q8WYK1 1306 aa3.81□□□□□ -1.8
PTP4A1-204ENST00000578299 METTL12A8MUP2 240 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms