RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CASP8AP2Q9UKL3 1982 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 PI4KAP2A4QPH2 592 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 IGKV5-2P06315 115 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 USP17L8P0C7I0 530 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 KSR2Q6VAB6 950 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 PODNQ7Z5L7 613 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 PI4KAP1Q8N8J0 262 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 GMLQ99445 158 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 MYOZ2Q9NPC6 264 aa20.41■□□□□ 0.86
VAPA-204ENST00000577901 SLC10A3P09131 477 aa20.4■□□□□ 0.86
VAPA-204ENST00000577901 WTIPA6NIX2 430 aaPredicted RBP20.39■□□□□ 0.85
VAPA-204ENST00000577901 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
VAPA-204ENST00000577901 TTLL11Q8NHH1 800 aa20.39■□□□□ 0.85
VAPA-204ENST00000577901 GREM2Q9H772 168 aa20.39■□□□□ 0.85
VAPA-204ENST00000577901 RNF186Q9NXI6 227 aa20.39■□□□□ 0.85
VAPA-204ENST00000577901 TRPA1O75762 1119 aa20.38■□□□□ 0.85
VAPA-204ENST00000577901 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
VAPA-204ENST00000577901 CSRNP1Q96S65 589 aa20.38■□□□□ 0.85
VAPA-204ENST00000577901 BSDC1Q9NW68 430 aaPredicted RBP20.38■□□□□ 0.85
VAPA-204ENST00000577901 MINPP1Q9UNW1 487 aa20.38■□□□□ 0.85
VAPA-204ENST00000577901 PSME4Q14997 1843 aa20.38■□□□□ 0.85
VAPA-204ENST00000577901 MED23Q9ULK4 1368 aa20.37■□□□□ 0.85
VAPA-204ENST00000577901 PITPNM2Q9BZ72 1349 aa20.37■□□□□ 0.85
VAPA-204ENST00000577901 CWF19L2Q2TBE0 894 aaKnown RBP20.37■□□□□ 0.85
VAPA-204ENST00000577901 NEURL1BA8MQ27 555 aa20.36■□□□□ 0.85
VAPA-204ENST00000577901 FKBP1BP68106 108 aa20.36■□□□□ 0.85
VAPA-204ENST00000577901 FLIIQ13045 1269 aa20.36■□□□□ 0.85
VAPA-204ENST00000577901 G2E3Q7L622 706 aa20.36■□□□□ 0.85
VAPA-204ENST00000577901 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
VAPA-204ENST00000577901 CCT4P50991 539 aaKnown RBP20.35■□□□□ 0.85
VAPA-204ENST00000577901 REM2Q8IYK8 340 aaPredicted RBP20.35■□□□□ 0.85
VAPA-204ENST00000577901 SCAF8Q9UPN6 1271 aaKnown RBP20.35■□□□□ 0.85
VAPA-204ENST00000577901 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
VAPA-204ENST00000577901 DACT2Q5SW24 774 aa20.34■□□□□ 0.85
VAPA-204ENST00000577901 FBXW7Q969H0 707 aa20.34■□□□□ 0.85
VAPA-204ENST00000577901 CDCA7LQ96GN5 454 aa20.34■□□□□ 0.85
VAPA-204ENST00000577901 MXD3Q9BW11 206 aa20.34■□□□□ 0.85
VAPA-204ENST00000577901 PAPPA2Q9BXP8 1791 aa20.34■□□□□ 0.85
VAPA-204ENST00000577901 H7C1W4 665 aa20.33■□□□□ 0.85
VAPA-204ENST00000577901 NBPF9Q3BBW0 867 aa20.33■□□□□ 0.85
VAPA-204ENST00000577901 UBE3BQ7Z3V4 1068 aa20.33■□□□□ 0.85
VAPA-204ENST00000577901 OGFOD1Q8N543 542 aa20.33■□□□□ 0.85
VAPA-204ENST00000577901 COA1Q9GZY4 146 aa20.33■□□□□ 0.85
VAPA-204ENST00000577901 LEMD3Q9Y2U8 911 aa20.33■□□□□ 0.85
VAPA-204ENST00000577901 SPEF2Q9C093 1822 aa20.32■□□□□ 0.84
VAPA-204ENST00000577901 MYO3BQ8WXR4 1341 aa20.32■□□□□ 0.84
VAPA-204ENST00000577901 IGHMBP2P38935 993 aaKnown RBP20.32■□□□□ 0.84
VAPA-204ENST00000577901 STRIP1Q5VSL9 837 aa20.32■□□□□ 0.84
VAPA-204ENST00000577901 PRAMEF18Q5VWM3 479 aa20.32■□□□□ 0.84
VAPA-204ENST00000577901 MOB2Q70IA6 237 aa20.32■□□□□ 0.84
VAPA-204ENST00000577901 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
VAPA-204ENST00000577901 UBE2Q2LH0YL09 131 aa20.31■□□□□ 0.84
VAPA-204ENST00000577901 TXNRD3Q86VQ6 643 aa20.31■□□□□ 0.84
VAPA-204ENST00000577901 MYH3P11055 1940 aa20.31■□□□□ 0.84
VAPA-204ENST00000577901 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
VAPA-204ENST00000577901 AKAP11Q9UKA4 1901 aa20.3■□□□□ 0.84
VAPA-204ENST00000577901 WNT10BO00744 389 aa20.3■□□□□ 0.84
VAPA-204ENST00000577901 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
VAPA-204ENST00000577901 GCKRQ14397 625 aa20.3■□□□□ 0.84
VAPA-204ENST00000577901 PLA2G12BQ9BX93 195 aa20.3■□□□□ 0.84
VAPA-204ENST00000577901 ANKRD2Q9GZV1 360 aa20.3■□□□□ 0.84
VAPA-204ENST00000577901 ZNF804BA4D1E1 1349 aa20.29■□□□□ 0.84
VAPA-204ENST00000577901 TNRC18O15417 2968 aaPredicted RBP20.29■□□□□ 0.84
VAPA-204ENST00000577901 ITGA6P23229 1130 aa20.29■□□□□ 0.84
VAPA-204ENST00000577901 TTLL12Q14166 644 aaPredicted RBP20.29■□□□□ 0.84
VAPA-204ENST00000577901 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
VAPA-204ENST00000577901 MPHOSPH8Q99549 860 aa20.29■□□□□ 0.84
VAPA-204ENST00000577901 ZNF646O15015 1829 aaPredicted RBP20.28■□□□□ 0.84
VAPA-204ENST00000577901 SASH1O94885 1247 aa20.28■□□□□ 0.84
VAPA-204ENST00000577901 KLRK1P26718 216 aa20.28■□□□□ 0.84
VAPA-204ENST00000577901 MMP14P50281 582 aa20.28■□□□□ 0.84
VAPA-204ENST00000577901 TTLL5Q6EMB2 1281 aa20.28■□□□□ 0.84
VAPA-204ENST00000577901 SLC34A2O95436 690 aa20.27■□□□□ 0.84
VAPA-204ENST00000577901 CSF1RP07333 972 aa20.27■□□□□ 0.84
VAPA-204ENST00000577901 CT47B1P0C2W7 299 aaPredicted RBP20.27■□□□□ 0.84
VAPA-204ENST00000577901 NF2P35240 595 aa20.27■□□□□ 0.84
VAPA-204ENST00000577901 CASP7P55210 303 aa20.27■□□□□ 0.84
VAPA-204ENST00000577901 CTU1Q7Z7A3 348 aaKnown RBP20.27■□□□□ 0.84
VAPA-204ENST00000577901 KIAA0825Q8IV33 1275 aa20.26■□□□□ 0.83
VAPA-204ENST00000577901 HDAC9Q9UKV0 1011 aa20.26■□□□□ 0.83
VAPA-204ENST00000577901 KCNJ4P48050 445 aa20.25■□□□□ 0.83
VAPA-204ENST00000577901 SOX10P56693 466 aa20.25■□□□□ 0.83
VAPA-204ENST00000577901 GTF2IP78347 998 aa20.25■□□□□ 0.83
VAPA-204ENST00000577901 MRPL50Q8N5N7 158 aaKnown RBP20.25■□□□□ 0.83
VAPA-204ENST00000577901 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
VAPA-204ENST00000577901 TBC1D8O95759 1140 aa20.24■□□□□ 0.83
VAPA-204ENST00000577901 CHRNDQ07001 517 aa20.24■□□□□ 0.83
VAPA-204ENST00000577901 ALDH1L2Q3SY69 923 aa20.24■□□□□ 0.83
VAPA-204ENST00000577901 APOBEC3FQ8IUX4 373 aaKnown RBP20.24■□□□□ 0.83
VAPA-204ENST00000577901 SSH1Q8WYL5 1049 aa20.24■□□□□ 0.83
VAPA-204ENST00000577901 ANKRD18BA2A2Z9 1011 aa20.23■□□□□ 0.83
VAPA-204ENST00000577901 F6X3S4 739 aa20.23■□□□□ 0.83
VAPA-204ENST00000577901 TM4SF4P48230 202 aa20.23■□□□□ 0.83
VAPA-204ENST00000577901 MKRN3Q13064 507 aaKnown RBP20.23■□□□□ 0.83
VAPA-204ENST00000577901 ARMC9Q7Z3E5 817 aa20.23■□□□□ 0.83
VAPA-204ENST00000577901 CD209Q9NNX6 404 aa20.23■□□□□ 0.83
VAPA-204ENST00000577901 PRKG1Q13976 671 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms