RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 WNT10BO00744 389 aa18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 PODNQ7Z5L7 613 aa18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 ISCA1Q9BUE6 129 aa18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 EFCC1Q9HA90 598 aa18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 SEC31BQ9NQW1 1179 aa18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 ANGEL1Q9UNK9 670 aaKnown RBP18.48■□□□□ 0.55
PPP4R1-206ENST00000577779 H0YGN5 161 aa18.47■□□□□ 0.55
PPP4R1-206ENST00000577779 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
PPP4R1-206ENST00000577779 SLC10A4Q96EP9 437 aa18.47■□□□□ 0.55
PPP4R1-206ENST00000577779 IGF2BP3O00425 579 aaKnown RBP eCLIP18.46■□□□□ 0.55
PPP4R1-206ENST00000577779 SASH1O94885 1247 aa18.46■□□□□ 0.55
PPP4R1-206ENST00000577779 ANKRD13DQ6ZTN6 518 aa18.46■□□□□ 0.55
PPP4R1-206ENST00000577779 SLC17A8Q8NDX2 589 aa18.46■□□□□ 0.55
PPP4R1-206ENST00000577779 XDHP47989 1333 aa18.46■□□□□ 0.55
PPP4R1-206ENST00000577779 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
PPP4R1-206ENST00000577779 ZBTB48P10074 688 aaPredicted RBP18.45■□□□□ 0.54
PPP4R1-206ENST00000577779 APOBEC3FQ8IUX4 373 aaKnown RBP18.45■□□□□ 0.54
PPP4R1-206ENST00000577779 OTUD5Q96G74 571 aa18.45■□□□□ 0.54
PPP4R1-206ENST00000577779 ZNF333Q96JL9 665 aa18.45■□□□□ 0.54
PPP4R1-206ENST00000577779 MXD3Q9BW11 206 aa18.45■□□□□ 0.54
PPP4R1-206ENST00000577779 FZD1Q9UP38 647 aa18.45■□□□□ 0.54
PPP4R1-206ENST00000577779 CRHR2Q13324 411 aa18.44■□□□□ 0.54
PPP4R1-206ENST00000577779 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
PPP4R1-206ENST00000577779 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
PPP4R1-206ENST00000577779 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
PPP4R1-206ENST00000577779 SP3Q02447 781 aa18.43■□□□□ 0.54
PPP4R1-206ENST00000577779 DACT2Q5SW24 774 aa18.43■□□□□ 0.54
PPP4R1-206ENST00000577779 OTUD7BQ6GQQ9 843 aa18.43■□□□□ 0.54
PPP4R1-206ENST00000577779 CHRDL2Q6WN34 429 aa18.43■□□□□ 0.54
PPP4R1-206ENST00000577779 WNK4Q96J92 1243 aa18.43■□□□□ 0.54
PPP4R1-206ENST00000577779 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
PPP4R1-206ENST00000577779 ATP2B4P23634 1241 aa18.42■□□□□ 0.54
PPP4R1-206ENST00000577779 SLC4A8Q2Y0W8 1093 aa18.42■□□□□ 0.54
PPP4R1-206ENST00000577779 SLC9C1Q4G0N8 1177 aa18.42■□□□□ 0.54
PPP4R1-206ENST00000577779 NBPF11Q86T75 865 aa18.42■□□□□ 0.54
PPP4R1-206ENST00000577779 CLMNQ96JQ2 1002 aa18.42■□□□□ 0.54
PPP4R1-206ENST00000577779 MYO3BQ8WXR4 1341 aa18.42■□□□□ 0.54
PPP4R1-206ENST00000577779 LAMB1P07942 1786 aa18.41■□□□□ 0.54
PPP4R1-206ENST00000577779 TRIM28Q13263 835 aaKnown RBP18.41■□□□□ 0.54
PPP4R1-206ENST00000577779 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
PPP4R1-206ENST00000577779 PNNQ9H307 717 aaKnown RBP18.41■□□□□ 0.54
PPP4R1-206ENST00000577779 LAMA3Q16787 3333 aa18.41■□□□□ 0.54
PPP4R1-206ENST00000577779 MMP14P50281 582 aa18.4■□□□□ 0.54
PPP4R1-206ENST00000577779 CAP1Q01518 475 aa18.4■□□□□ 0.54
PPP4R1-206ENST00000577779 ZBTB38Q8NAP3 1195 aaPredicted RBP18.4■□□□□ 0.54
PPP4R1-206ENST00000577779 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
PPP4R1-206ENST00000577779 ZNF646O15015 1829 aaPredicted RBP18.39■□□□□ 0.54
PPP4R1-206ENST00000577779 COL1A1P02452 1464 aaPredicted RBP18.39■□□□□ 0.54
PPP4R1-206ENST00000577779 PPP1R12BO60237 982 aaPredicted RBP18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 RIPK4P57078 832 aa18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 MAP3K11Q16584 847 aa18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 STRIP1Q5VSL9 837 aa18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 ANKRD18AQ8IVF6 992 aa18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 DEFB129Q9H1M3 183 aa18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 MED23Q9ULK4 1368 aa18.39■□□□□ 0.53
PPP4R1-206ENST00000577779 WTIPA6NIX2 430 aaPredicted RBP18.38■□□□□ 0.53
PPP4R1-206ENST00000577779 MYCP01106 439 aaPredicted RBP18.38■□□□□ 0.53
PPP4R1-206ENST00000577779 ARHGEF6Q15052 776 aa18.38■□□□□ 0.53
PPP4R1-206ENST00000577779 HDGFL1Q5TGJ6 251 aa18.38■□□□□ 0.53
PPP4R1-206ENST00000577779 RBM27Q9P2N5 1060 aaKnown RBP18.38■□□□□ 0.53
PPP4R1-206ENST00000577779 PTCH2Q9Y6C5 1203 aa18.38■□□□□ 0.53
PPP4R1-206ENST00000577779 DBF4Q9UBU7 674 aaPredicted RBP18.37■□□□□ 0.53
PPP4R1-206ENST00000577779 SSC5DA1L4H1 1573 aa18.36■□□□□ 0.53
PPP4R1-206ENST00000577779 UNCXA6NJT0 531 aa18.36■□□□□ 0.53
PPP4R1-206ENST00000577779 KIAA0825Q8IV33 1275 aa18.36■□□□□ 0.53
PPP4R1-206ENST00000577779 ZBED3Q96IU2 234 aaPredicted RBP18.36■□□□□ 0.53
PPP4R1-206ENST00000577779 PTPN18Q99952 460 aa18.36■□□□□ 0.53
PPP4R1-206ENST00000577779 PDE8AO60658 829 aa18.35■□□□□ 0.53
PPP4R1-206ENST00000577779 DPF3Q92784 378 aa18.35■□□□□ 0.53
PPP4R1-206ENST00000577779 COA1Q9GZY4 146 aa18.35■□□□□ 0.53
PPP4R1-206ENST00000577779 HYPKQ9NX55 129 aa18.35■□□□□ 0.53
PPP4R1-206ENST00000577779 UNC80Q8N2C7 3258 aa18.34■□□□□ 0.53
PPP4R1-206ENST00000577779 GJA5P36382 358 aa18.34■□□□□ 0.53
PPP4R1-206ENST00000577779 LMOD3Q0VAK6 560 aa18.34■□□□□ 0.53
PPP4R1-206ENST00000577779 TTLL5Q6EMB2 1281 aa18.34■□□□□ 0.53
PPP4R1-206ENST00000577779 RIC3Q7Z5B4 369 aa18.34■□□□□ 0.53
PPP4R1-206ENST00000577779 TESPA1A2RU30 521 aaPredicted RBP18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 IREB2P48200 963 aaKnown RBP18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 DLGAP5Q15398 846 aa18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 SUPT20HL1Q3ZLR7 823 aa18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 JARID2Q92833 1246 aaPredicted RBP18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 CDC5LQ99459 802 aaKnown RBP18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 PPP2R3BQ9Y5P8 575 aa18.33■□□□□ 0.52
PPP4R1-206ENST00000577779 GOLGA2Q08379 1002 aa18.32■□□□□ 0.52
PPP4R1-206ENST00000577779 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
PPP4R1-206ENST00000577779 SH3TC2Q8TF17 1288 aa18.32■□□□□ 0.52
PPP4R1-206ENST00000577779 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
PPP4R1-206ENST00000577779 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
PPP4R1-206ENST00000577779 SPEF2Q9C093 1822 aa18.32■□□□□ 0.52
PPP4R1-206ENST00000577779 CHL1O00533 1208 aa18.31■□□□□ 0.52
PPP4R1-206ENST00000577779 HOXB7P09629 217 aa18.31■□□□□ 0.52
PPP4R1-206ENST00000577779 TXNRD3Q86VQ6 643 aa18.31■□□□□ 0.52
PPP4R1-206ENST00000577779 ANKRD13AQ8IZ07 590 aa18.31■□□□□ 0.52
PPP4R1-206ENST00000577779 MYD88Q99836 296 aa18.31■□□□□ 0.52
PPP4R1-206ENST00000577779 BSDC1Q9NW68 430 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms