RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 HNRNPCL1O60812 293 aaKnown RBP9.97□□□□□ -0.81
CDH8-203ENST00000577390 ABL1P00519 1130 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 POLD1P28340 1107 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 FAM180AQ6UWF9 173 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 CTCFLQ8NI51 663 aaPredicted RBP9.97□□□□□ -0.81
CDH8-203ENST00000577390 ANO3Q9BYT9 981 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 NEK4P51957 841 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 UBE2HP62256 183 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 NAA16Q6N069 864 aaPredicted RBP9.97□□□□□ -0.81
CDH8-203ENST00000577390 MYH11P35749 1972 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 HSF2BPO75031 334 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 SKILP12757 684 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 RNF217Q8TC41 542 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 TMC2Q8TDI7 906 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 E7EVH7 732 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 USP37Q86T82 979 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 BAG1Q99933 345 aaPredicted RBP9.97□□□□□ -0.81
CDH8-203ENST00000577390 GOLGA6CA6NDK9 693 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 CTAGE5O15320 804 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 HLA-DOAP06340 250 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 GOLGA6DP0CG33 693 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 GOLGA6AQ9NYA3 693 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 TMEM110-MUSTN1A8MSY1 372 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 EXOC4Q96A65 974 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
CDH8-203ENST00000577390 MORC2Q9Y6X9 1032 aaPredicted RBP9.97□□□□□ -0.81
CDH8-203ENST00000577390 PLEKHO1Q53GL0 409 aaPredicted RBP9.96□□□□□ -0.81
CDH8-203ENST00000577390 BRDTQ58F21 947 aaPredicted RBP9.96□□□□□ -0.81
CDH8-203ENST00000577390 GAS2L3Q86XJ1 694 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 MAP10Q9P2G4 905 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 HSPA1LP34931 641 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 CCDC30Q5VVM6 783 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 NAA15Q9BXJ9 866 aaKnown RBP9.96□□□□□ -0.81
CDH8-203ENST00000577390 API5Q9BZZ5 524 aaKnown RBP9.96□□□□□ -0.81
CDH8-203ENST00000577390 SP4Q02446 784 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 PPP1R21Q6ZMI0 780 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 ANKRD35Q8N283 1001 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 PRDM11Q9NQV5 511 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 STARD3NLO95772 234 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 ADRA2BP18089 450 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 CCDC38Q502W7 563 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 SPTLC3Q9NUV7 552 aa9.96□□□□□ -0.81
CDH8-203ENST00000577390 TBCCQ15814 346 aa9.96□□□□□ -0.82
CDH8-203ENST00000577390 IFT74Q96LB3 600 aa9.96□□□□□ -0.82
CDH8-203ENST00000577390 RNF8O76064 485 aa9.96□□□□□ -0.82
CDH8-203ENST00000577390 CCDC40Q4G0X9 1142 aa9.96□□□□□ -0.82
CDH8-203ENST00000577390 OLA1Q9NTK5 396 aaKnown RBP9.96□□□□□ -0.82
CDH8-203ENST00000577390 ST20-MTHFSA0A0A6YYL1 179 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 MTHFSP49914 203 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 MCM6Q14566 821 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 EFCAB2Q5VUJ9 269 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 CABS1Q96KC9 395 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 KRT85P78386 507 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 CALML4Q96GE6 196 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 MYOM3Q5VTT5 1437 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 HNRNPH2P55795 449 aaKnown RBP9.95□□□□□ -0.82
CDH8-203ENST00000577390 HDAC1Q13547 482 aaPredicted RBP9.95□□□□□ -0.82
CDH8-203ENST00000577390 LCA5Q86VQ0 697 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 ZNF513Q8N8E2 541 aaPredicted RBP9.95□□□□□ -0.82
CDH8-203ENST00000577390 N4BP2L2Q92802 583 aaPredicted RBP9.95□□□□□ -0.82
CDH8-203ENST00000577390 SRGAP3O43295 1099 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 NSMCE1Q8WV22 266 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 LMCD1Q9NZU5 365 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 TUBBP07437 444 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 ANKRD1Q15327 319 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 MED4Q9NPJ6 270 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 CCDC186Q7Z3E2 898 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 A6NNZ2 444 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 ATP2A1O14983 1001 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 TUBB8Q3ZCM7 444 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.95□□□□□ -0.82
CDH8-203ENST00000577390 CCDC141Q6ZP82 1450 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 NUP155O75694 1391 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 TBCAO75347 108 aaKnown RBP9.95□□□□□ -0.82
CDH8-203ENST00000577390 METTL24Q5JXM2 366 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 TMCO5AQ8N6Q1 288 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 SLC7A5P2Q9GIP4 190 aa9.95□□□□□ -0.82
CDH8-203ENST00000577390 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
CDH8-203ENST00000577390 CCDC121Q6ZUS5 278 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 AFAP1L1Q8TED9 768 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 KRT13P13646 458 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 SPDYE1Q8NFV5 336 aaPredicted RBP9.94□□□□□ -0.82
CDH8-203ENST00000577390 NAP1L4Q99733 375 aaKnown RBP9.94□□□□□ -0.82
CDH8-203ENST00000577390 CYP2C19P33261 490 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 STMN2Q93045 179 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 FAM95CA0A1B0GW59 222 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 SH2D4BQ5SQS7 431 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 CCDC110Q8TBZ0 833 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 ZBTB21Q9ULJ3 1066 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 MX1P20591 662 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 ZFYVE1Q9HBF4 777 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 FRMD4BQ9Y2L6 1034 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 RABGAP1Q9Y3P9 1069 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 GOLGA4Q13439 2230 aaKnown RBP9.94□□□□□ -0.82
CDH8-203ENST00000577390 WHAMMP3Q1A5X7 153 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 SPATS2Q86XZ4 545 aaKnown RBP9.94□□□□□ -0.82
CDH8-203ENST00000577390 MSANTD4Q8NCY6 345 aa9.94□□□□□ -0.82
CDH8-203ENST00000577390 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
CDH8-203ENST00000577390 SLC8A1P32418 973 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms