RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 SCAF8Q9UPN6 1271 aaKnown RBP8.17□□□□□ -1.1
SNX11-204ENST00000577310 TCF20Q9UGU0 1960 aaKnown RBP8.17□□□□□ -1.1
SNX11-204ENST00000577310 SPTBN4Q9H254 2564 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 MGAMO43451 1857 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 PIP4K2AP48426 406 aaPredicted RBP8.16□□□□□ -1.1
SNX11-204ENST00000577310 PRKG1Q13976 671 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 C3orf67Q6ZVT6 689 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 NECAB2Q7Z6G3 386 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 ATXN2LQ8WWM7 1075 aaKnown RBP8.16□□□□□ -1.1
SNX11-204ENST00000577310 C5orf42Q9H799 3197 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 RIPOR2Q9Y4F9 1068 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 USP16Q9Y5T5 823 aa8.16□□□□□ -1.1
SNX11-204ENST00000577310 PKD1L2Q7Z442 2459 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 REV3LO60673 3130 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 ERVV-1B6SEH8 477 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 WDHD1O75717 1129 aaPredicted RBP8.15□□□□□ -1.1
SNX11-204ENST00000577310 TFRCP02786 760 aaKnown RBP8.15□□□□□ -1.1
SNX11-204ENST00000577310 FOSL2P15408 326 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 HOXD10P28358 340 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 TAF1CQ15572 869 aaPredicted RBP8.15□□□□□ -1.1
SNX11-204ENST00000577310 SLC10A5Q5PT55 438 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 RSBN1LQ6PCB5 846 aaPredicted RBP8.15□□□□□ -1.1
SNX11-204ENST00000577310 HELBQ8NG08 1087 aaPredicted RBP8.15□□□□□ -1.1
SNX11-204ENST00000577310 RAET1EQ8TD07 263 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 ADAMTS19Q8TE59 1207 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 MYLIPQ8WY64 445 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 PAWRQ96IZ0 340 aaKnown RBP8.15□□□□□ -1.1
SNX11-204ENST00000577310 LRFN3Q9BTN0 628 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 ARHGAP39Q9C0H5 1083 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 SRRDQ9UH36 339 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 CACNA1BQ00975 2339 aa8.15□□□□□ -1.1
SNX11-204ENST00000577310 NBPF26B4DH59 902 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 RIMBP2O15034 1052 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 PPP1R12BO60237 982 aaPredicted RBP8.14□□□□□ -1.11
SNX11-204ENST00000577310 ECM2O94769 699 aaPredicted RBP8.14□□□□□ -1.11
SNX11-204ENST00000577310 SYN1P17600 705 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 MRE11P49959 708 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 FOXK2Q01167 660 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 TEFQ10587 303 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 DOK7Q18PE1 504 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 NBPF9Q3BBW0 867 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 SUSD4Q5VX71 490 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 CLMNQ96JQ2 1002 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 UHRF1Q96T88 793 aaPredicted RBP8.14□□□□□ -1.11
SNX11-204ENST00000577310 GMLQ99445 158 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 EYA3Q99504 573 aa8.14□□□□□ -1.11
SNX11-204ENST00000577310 BIN2Q9UBW5 565 aaPredicted RBP8.14□□□□□ -1.11
SNX11-204ENST00000577310 TLR2O60603 784 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 NTSR2O95665 410 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 GRAPQ13588 217 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 NBPF10Q6P3W6 841 aaKnown RBP8.13□□□□□ -1.11
SNX11-204ENST00000577310 APOBEC3FQ8IUX4 373 aaKnown RBP8.13□□□□□ -1.11
SNX11-204ENST00000577310 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 GRAPLQ8TC17 118 aaPredicted RBP8.13□□□□□ -1.11
SNX11-204ENST00000577310 ASB2Q96Q27 587 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 CRISPLD2Q9H0B8 497 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 UNC93B1Q9H1C4 597 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
SNX11-204ENST00000577310 COL1A1P02452 1464 aaPredicted RBP8.13□□□□□ -1.11
SNX11-204ENST00000577310 ECM29Q5VYK3 1845 aa8.13□□□□□ -1.11
SNX11-204ENST00000577310 UBN2Q6ZU65 1347 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 C6orf229H3BNL8 230 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 WNT10BO00744 389 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 SNRPA1P09661 255 aaKnown RBP8.12□□□□□ -1.11
SNX11-204ENST00000577310 GJA5P36382 358 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
SNX11-204ENST00000577310 DDX46Q7L014 1031 aaKnown RBP8.12□□□□□ -1.11
SNX11-204ENST00000577310 PPP1R42Q7Z4L9 355 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 MS4A4AQ96JQ5 239 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 POLLQ9UGP5 575 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 DOCK3Q8IZD9 2030 aa8.12□□□□□ -1.11
SNX11-204ENST00000577310 OTOFQ9HC10 1997 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 BAHCC1Q9P281 2608 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 OSBPP22059 807 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 GPTP24298 496 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 MMP14P50281 582 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 ZNF34Q8IZ26 560 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 SLAIN1Q8ND83 568 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 BRI3BPQ8WY22 251 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 DEFB118Q96PH6 123 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 ZC3H12CQ9C0D7 883 aaKnown RBP8.11□□□□□ -1.11
SNX11-204ENST00000577310 ZCCHC17Q9NP64 241 aaKnown RBP8.11□□□□□ -1.11
SNX11-204ENST00000577310 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.11□□□□□ -1.11
SNX11-204ENST00000577310 FZD1Q9UP38 647 aa8.11□□□□□ -1.11
SNX11-204ENST00000577310 MAP3K15Q6ZN16 1313 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 DDX60LQ5H9U9 1706 aaKnown RBP8.1□□□□□ -1.11
SNX11-204ENST00000577310 G3V3G9 751 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 PSMC4P43686 418 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 PARP10Q53GL7 1025 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 CDCA8Q53HL2 280 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 TMEM31Q5JXX7 168 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 DCAF8Q5TAQ9 597 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 ANKRD13AQ8IZ07 590 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 OGFOD1Q8N543 542 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 USP38Q8NB14 1042 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 IL17REQ8NFR9 667 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 NBPF3Q9H094 633 aa8.1□□□□□ -1.11
SNX11-204ENST00000577310 TTYH1Q9H313 450 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms