RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 POLRMTO00411 1230 aaKnown RBP8.36□□□□□ -1.07
NUP88-212ENST00000576708 KCNQ3O43525 872 aa8.36□□□□□ -1.07
NUP88-212ENST00000576708 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
NUP88-212ENST00000576708 RPIAP49247 311 aa8.36□□□□□ -1.07
NUP88-212ENST00000576708 SH3BP2P78314 561 aa8.36□□□□□ -1.07
NUP88-212ENST00000576708 SKOR1P84550 965 aa8.36□□□□□ -1.07
NUP88-212ENST00000576708 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
NUP88-212ENST00000576708 PHACTR3Q96KR7 559 aa8.36□□□□□ -1.07
NUP88-212ENST00000576708 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
NUP88-212ENST00000576708 NFIXQ14938 502 aa8.35□□□□□ -1.07
NUP88-212ENST00000576708 AGERQ15109 404 aa8.35□□□□□ -1.07
NUP88-212ENST00000576708 ZNF496Q96IT1 587 aaPredicted RBP8.35□□□□□ -1.07
NUP88-212ENST00000576708 NARFQ9UHQ1 456 aa8.35□□□□□ -1.07
NUP88-212ENST00000576708 VIRMAQ69YN4 1812 aaKnown RBP8.35□□□□□ -1.07
NUP88-212ENST00000576708 COL15A1P39059 1388 aa8.35□□□□□ -1.07
NUP88-212ENST00000576708 NPC1L1Q9UHC9 1359 aa8.35□□□□□ -1.07
NUP88-212ENST00000576708 MAGEB6P1A0A0J9YX57 407 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 A6NJR5 290 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 GNAT3A8MTJ3 354 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 FBXO45P0C2W1 286 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 PRKAR2BP31323 418 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 VAC14Q08AM6 782 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 TEFQ10587 303 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 DALRD3Q5D0E6 543 aaKnown RBP8.34□□□□□ -1.07
NUP88-212ENST00000576708 C9orf131Q5VYM1 1079 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 BICDL1Q6ZP65 573 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 PIM2Q9P1W9 311 aa8.34□□□□□ -1.07
NUP88-212ENST00000576708 ZC3H4Q9UPT8 1303 aaKnown RBP8.33□□□□□ -1.08
NUP88-212ENST00000576708 A1BGP04217 495 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 SERPINB2P05120 415 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 PPP2R1AP30153 589 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 BRCA1P38398 1863 aaKnown RBP8.33□□□□□ -1.08
NUP88-212ENST00000576708 SPRYD7Q5W111 196 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 PDXDC2PQ6P474 469 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 ZNF790Q6PG37 636 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 TTC5Q8N0Z6 440 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 GAS2L2Q8NHY3 880 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 ARHGAP9Q9BRR9 750 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 NMRK2Q9NPI5 230 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
NUP88-212ENST00000576708 UBR2Q8IWV8 1755 aa8.33□□□□□ -1.08
NUP88-212ENST00000576708 PRAMEF22A3QJZ6 481 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 POM121CA8CG34 1229 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 U2AF1L5P0DN76 240 aaPredicted RBP8.32□□□□□ -1.08
NUP88-212ENST00000576708 PIP4K2AP48426 406 aaPredicted RBP8.32□□□□□ -1.08
NUP88-212ENST00000576708 EIF5P55010 431 aaKnown RBP8.32□□□□□ -1.08
NUP88-212ENST00000576708 U2AF1Q01081 240 aaKnown RBP eCLIP8.32□□□□□ -1.08
NUP88-212ENST00000576708 PTK2Q05397 1052 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 DCTN1Q14203 1278 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
NUP88-212ENST00000576708 CARMIL3Q8ND23 1372 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 HEG1Q9ULI3 1381 aa8.32□□□□□ -1.08
NUP88-212ENST00000576708 BTBD11A6QL63 1104 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 ZBBXA8MT70 800 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 TRAK2O60296 914 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 STARD3NLO95772 234 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 HSPA6P17066 643 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 PRELPP51888 382 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 RASSF7Q02833 373 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 FOXC1Q12948 553 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 TBC1D9BQ66K14 1250 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 MCM10Q7L590 875 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 C2CD5Q86YS7 1000 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 WWC1Q8IX03 1113 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 CFAP53Q96M91 514 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 RNF181Q9P0P0 153 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 USP16Q9Y5T5 823 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 CEMIPQ8WUJ3 1361 aa8.31□□□□□ -1.08
NUP88-212ENST00000576708 AFDNP55196 1824 aaKnown RBP8.31□□□□□ -1.08
NUP88-212ENST00000576708 SIPA1L3O60292 1781 aaPredicted RBP8.3□□□□□ -1.08
NUP88-212ENST00000576708 WNT7BP56706 349 aa8.3□□□□□ -1.08
NUP88-212ENST00000576708 NR1H3Q13133 447 aa8.3□□□□□ -1.08
NUP88-212ENST00000576708 ZBTB33Q86T24 672 aa8.3□□□□□ -1.08
NUP88-212ENST00000576708 BPHLQ86WA6 291 aaPredicted RBP8.3□□□□□ -1.08
NUP88-212ENST00000576708 ADAM32Q8TC27 787 aa8.3□□□□□ -1.08
NUP88-212ENST00000576708 FMNL2Q96PY5 1086 aa8.3□□□□□ -1.08
NUP88-212ENST00000576708 V9GY48 417 aaPredicted RBP8.3□□□□□ -1.08
NUP88-212ENST00000576708 NRXN2Q9P2S2 1712 aa8.29□□□□□ -1.08
NUP88-212ENST00000576708 ARFGEF1Q9Y6D6 1849 aa8.29□□□□□ -1.08
NUP88-212ENST00000576708 A0A087WZG4 1122 aa8.29□□□□□ -1.08
NUP88-212ENST00000576708 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
NUP88-212ENST00000576708 ZNF598Q86UK7 904 aaKnown RBP8.29□□□□□ -1.08
NUP88-212ENST00000576708 EHBP1Q8NDI1 1231 aa8.29□□□□□ -1.08
NUP88-212ENST00000576708 TEX13AQ9BXU3 409 aaPredicted RBP8.29□□□□□ -1.08
NUP88-212ENST00000576708 MIS18AQ9NYP9 233 aa8.29□□□□□ -1.08
NUP88-212ENST00000576708 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
NUP88-212ENST00000576708 H0YIN7 160 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 TOMM70O94826 608 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 CAMTA2O94983 1202 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 IL6STP40189 918 aaPredicted RBP8.28□□□□□ -1.08
NUP88-212ENST00000576708 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 PRR5LQ6MZQ0 368 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 TTLL6Q8N841 843 aa8.28□□□□□ -1.08
NUP88-212ENST00000576708 ZNF622Q969S3 477 aaKnown RBP eCLIP8.28□□□□□ -1.083e-6■■□□□ 12.2
NUP88-212ENST00000576708 RRAGCQ9HB90 399 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms