RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
NDE1-211ENST00000576502 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
NDE1-211ENST00000576502 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
NDE1-211ENST00000576502 PGAP2Q9UHJ9 254 aa17.34■□□□□ 0.37
NDE1-211ENST00000576502 ZBED9Q6R2W3 1325 aa17.33■□□□□ 0.36
NDE1-211ENST00000576502 USP17L8P0C7I0 530 aa17.33■□□□□ 0.36
NDE1-211ENST00000576502 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
NDE1-211ENST00000576502 OGFOD1Q8N543 542 aa17.33■□□□□ 0.36
NDE1-211ENST00000576502 JMYQ8N9B5 988 aa17.33■□□□□ 0.36
NDE1-211ENST00000576502 TRPM4Q8TD43 1214 aa17.33■□□□□ 0.36
NDE1-211ENST00000576502 ZNF594Q96JF6 807 aaPredicted RBP17.33■□□□□ 0.36
NDE1-211ENST00000576502 A0A1B0GUL6 1792 aa17.33■□□□□ 0.36
NDE1-211ENST00000576502 PLIN1O60240 522 aa17.32■□□□□ 0.36
NDE1-211ENST00000576502 TAF5LO75529 589 aa17.32■□□□□ 0.36
NDE1-211ENST00000576502 UBE4AQ14139 1066 aa17.32■□□□□ 0.36
NDE1-211ENST00000576502 TBC1D10BQ4KMP7 808 aaPredicted RBP17.32■□□□□ 0.36
NDE1-211ENST00000576502 SAMD7Q7Z3H4 446 aa17.32■□□□□ 0.36
NDE1-211ENST00000576502 DCPSQ96C86 337 aaKnown RBP17.32■□□□□ 0.36
NDE1-211ENST00000576502 KAZALD1Q96I82 304 aa17.32■□□□□ 0.36
NDE1-211ENST00000576502 ABT1Q9ULW3 272 aaKnown RBP17.32■□□□□ 0.36
NDE1-211ENST00000576502 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
NDE1-211ENST00000576502 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
NDE1-211ENST00000576502 TTLL5Q6EMB2 1281 aa17.31■□□□□ 0.36
NDE1-211ENST00000576502 ANKRD44Q8N8A2 993 aa17.31■□□□□ 0.36
NDE1-211ENST00000576502 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
NDE1-211ENST00000576502 HDAC9Q9UKV0 1011 aa17.31■□□□□ 0.36
NDE1-211ENST00000576502 CNTNAP1P78357 1384 aa17.3■□□□□ 0.36
NDE1-211ENST00000576502 GNAI3P08754 354 aa17.3■□□□□ 0.36
NDE1-211ENST00000576502 HIRAP54198 1017 aaPredicted RBP17.3■□□□□ 0.36
NDE1-211ENST00000576502 CD209Q9NNX6 404 aa17.3■□□□□ 0.36
NDE1-211ENST00000576502 MKRN1Q9UHC7 482 aaKnown RBP17.3■□□□□ 0.36
NDE1-211ENST00000576502 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 METTL24Q5JXM2 366 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 DACT2Q5SW24 774 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 TXNRD3Q86VQ6 643 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 SULF1Q8IWU6 871 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
NDE1-211ENST00000576502 GMLQ99445 158 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
NDE1-211ENST00000576502 WTIPA6NIX2 430 aaPredicted RBP17.28■□□□□ 0.36
NDE1-211ENST00000576502 GTF2IP78347 998 aa17.28■□□□□ 0.36
NDE1-211ENST00000576502 DEFB115Q30KQ5 88 aa17.28■□□□□ 0.36
NDE1-211ENST00000576502 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
NDE1-211ENST00000576502 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
NDE1-211ENST00000576502 GLIS2Q9BZE0 524 aaPredicted RBP17.28■□□□□ 0.36
NDE1-211ENST00000576502 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
NDE1-211ENST00000576502 RIPOR2Q9Y4F9 1068 aa17.28■□□□□ 0.36
NDE1-211ENST00000576502 RASSF10A6NK89 507 aa17.27■□□□□ 0.36
NDE1-211ENST00000576502 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
NDE1-211ENST00000576502 IL1R1P14778 569 aa17.27■□□□□ 0.36
NDE1-211ENST00000576502 KLRK1P26718 216 aa17.27■□□□□ 0.36
NDE1-211ENST00000576502 ECE1P42892 770 aa17.27■□□□□ 0.36
NDE1-211ENST00000576502 ZKSCAN2Q63HK3 967 aa17.27■□□□□ 0.36
NDE1-211ENST00000576502 POLR2AP24928 1970 aaKnown RBP17.27■□□□□ 0.36
NDE1-211ENST00000576502 PITPNM2Q9BZ72 1349 aa17.26■□□□□ 0.35
NDE1-211ENST00000576502 TRAF5O00463 557 aa17.26■□□□□ 0.35
NDE1-211ENST00000576502 HIBADHP31937 336 aaKnown RBP17.26■□□□□ 0.35
NDE1-211ENST00000576502 FKBP1AP62942 108 aaKnown RBP17.26■□□□□ 0.35
NDE1-211ENST00000576502 CAVIN4Q5BKX8 364 aa17.26■□□□□ 0.35
NDE1-211ENST00000576502 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
NDE1-211ENST00000576502 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
NDE1-211ENST00000576502 GGA3Q9NZ52 723 aa17.26■□□□□ 0.35
NDE1-211ENST00000576502 EYA2O00167 538 aa17.25■□□□□ 0.35
NDE1-211ENST00000576502 PDE8BO95263 885 aa17.25■□□□□ 0.35
NDE1-211ENST00000576502 TRIM27P14373 513 aa17.25■□□□□ 0.35
NDE1-211ENST00000576502 SCARF1Q14162 830 aa17.25■□□□□ 0.35
NDE1-211ENST00000576502 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
NDE1-211ENST00000576502 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
NDE1-211ENST00000576502 ZNF408Q9H9D4 720 aa17.25■□□□□ 0.35
NDE1-211ENST00000576502 LRRFIP2Q9Y608 721 aaKnown RBP17.25■□□□□ 0.35
NDE1-211ENST00000576502 IRS2Q9Y4H2 1338 aa17.24■□□□□ 0.35
NDE1-211ENST00000576502 SNAP23O00161 211 aa17.24■□□□□ 0.35
NDE1-211ENST00000576502 BCAR3O75815 825 aa17.24■□□□□ 0.35
NDE1-211ENST00000576502 SASH1O94885 1247 aa17.24■□□□□ 0.35
NDE1-211ENST00000576502 EGFRP00533 1210 aa17.24■□□□□ 0.35
NDE1-211ENST00000576502 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
NDE1-211ENST00000576502 PUM3Q15397 648 aaKnown RBP17.24■□□□□ 0.35
NDE1-211ENST00000576502 LRRC24Q50LG9 513 aa17.24■□□□□ 0.35
NDE1-211ENST00000576502 TLL2Q9Y6L7 1015 aa17.24■□□□□ 0.35
NDE1-211ENST00000576502 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
NDE1-211ENST00000576502 ANGEL2Q5VTE6 544 aaKnown RBP17.23■□□□□ 0.35
NDE1-211ENST00000576502 CST9Q5W186 159 aa17.23■□□□□ 0.35
NDE1-211ENST00000576502 KIAA0825Q8IV33 1275 aa17.23■□□□□ 0.35
NDE1-211ENST00000576502 HHIPL1Q96JK4 782 aa17.23■□□□□ 0.35
NDE1-211ENST00000576502 MEIS3Q99687 375 aa17.23■□□□□ 0.35
NDE1-211ENST00000576502 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
NDE1-211ENST00000576502 MYO1BO43795 1136 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 CIAO1O76071 339 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 SLC5A1P13866 664 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 VEGFBP49765 207 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 C2orf69Q8N8R5 385 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 KLHDC4Q8TBB5 520 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 AIDAQ96BJ3 306 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
NDE1-211ENST00000576502 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
NDE1-211ENST00000576502 GNAI2P04899 355 aa17.21■□□□□ 0.35
NDE1-211ENST00000576502 MS4A1P11836 297 aa17.21■□□□□ 0.35
NDE1-211ENST00000576502 IL15P40933 162 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms