RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 FTSJ3Q8IY81 847 aaKnown RBP29.38■■■□□ 2.29
SNF8-217ENST00000576353 KLRK1P26718 216 aa29.37■■■□□ 2.29
SNF8-217ENST00000576353 SNAP23O00161 211 aa29.36■■■□□ 2.29
SNF8-217ENST00000576353 MICALL2Q8IY33 904 aa29.36■■■□□ 2.29
SNF8-217ENST00000576353 DZIP1LQ8IYY4 767 aaKnown RBP29.36■■■□□ 2.29
SNF8-217ENST00000576353 TMEM57Q8N5G2 664 aa29.36■■■□□ 2.29
SNF8-217ENST00000576353 RFX5P48382 616 aaPredicted RBP29.35■■■□□ 2.29
SNF8-217ENST00000576353 UBE4AQ14139 1066 aa29.35■■■□□ 2.29
SNF8-217ENST00000576353 LRRC24Q50LG9 513 aa29.35■■■□□ 2.29
SNF8-217ENST00000576353 RSBN1LQ6PCB5 846 aaPredicted RBP29.35■■■□□ 2.29
SNF8-217ENST00000576353 AGBL3Q8NEM8 1001 aa29.35■■■□□ 2.29
SNF8-217ENST00000576353 KLHDC4Q8TBB5 520 aa29.35■■■□□ 2.29
SNF8-217ENST00000576353 METTL24Q5JXM2 366 aa29.34■■■□□ 2.29
SNF8-217ENST00000576353 ZNF804AQ7Z570 1209 aa29.34■■■□□ 2.29
SNF8-217ENST00000576353 PTPN12Q05209 780 aaKnown RBP29.33■■■□□ 2.29
SNF8-217ENST00000576353 STRIP1Q5VSL9 837 aa29.33■■■□□ 2.29
SNF8-217ENST00000576353 CD209Q9NNX6 404 aa29.33■■■□□ 2.29
SNF8-217ENST00000576353 IRS2Q9Y4H2 1338 aa29.33■■■□□ 2.29
SNF8-217ENST00000576353 EYA2O00167 538 aa29.32■■■□□ 2.28
SNF8-217ENST00000576353 GNAI2P04899 355 aa29.32■■■□□ 2.28
SNF8-217ENST00000576353 CNTROBQ8N137 903 aa29.32■■■□□ 2.28
SNF8-217ENST00000576353 FBXO3Q9UK99 471 aa29.32■■■□□ 2.28
SNF8-217ENST00000576353 MAP1SQ66K74 1059 aaPredicted RBP29.31■■■□□ 2.28
SNF8-217ENST00000576353 RCAN3Q9UKA8 241 aa29.31■■■□□ 2.28
SNF8-217ENST00000576353 ZNF609O15014 1411 aa29.3■■■□□ 2.28
SNF8-217ENST00000576353 SHTN1A0MZ66 631 aa29.3■■■□□ 2.28
SNF8-217ENST00000576353 PDE8BO95263 885 aa29.3■■■□□ 2.28
SNF8-217ENST00000576353 MS4A1P11836 297 aa29.3■■■□□ 2.28
SNF8-217ENST00000576353 ZC3H15Q8WU90 426 aaKnown RBP29.3■■■□□ 2.28
SNF8-217ENST00000576353 FBXW7Q969H0 707 aa29.3■■■□□ 2.28
SNF8-217ENST00000576353 ITGBL1O95965 494 aaPredicted RBP29.29■■■□□ 2.28
SNF8-217ENST00000576353 DACT2Q5SW24 774 aa29.29■■■□□ 2.28
SNF8-217ENST00000576353 TTLL5Q6EMB2 1281 aa29.29■■■□□ 2.28
SNF8-217ENST00000576353 MYO3BQ8WXR4 1341 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 CIAO1O76071 339 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 IL1R1P14778 569 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 MTX1Q13505 466 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 ITPRIPQ8IWB1 547 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 VGLL2Q8N8G2 317 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 TRPM4Q8TD43 1214 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 GMLQ99445 158 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 ADAMTSL1Q8N6G6 1762 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 SCN9AQ15858 1988 aa29.28■■■□□ 2.28
SNF8-217ENST00000576353 SRGAP3O43295 1099 aa29.27■■■□□ 2.28
SNF8-217ENST00000576353 USP17L8P0C7I0 530 aa29.27■■■□□ 2.28
SNF8-217ENST00000576353 RLBP1P12271 317 aa29.27■■■□□ 2.28
SNF8-217ENST00000576353 HIRAP54198 1017 aaPredicted RBP29.27■■■□□ 2.28
SNF8-217ENST00000576353 SAMD7Q7Z3H4 446 aa29.27■■■□□ 2.28
SNF8-217ENST00000576353 PGAP2Q9UHJ9 254 aa29.27■■■□□ 2.28
SNF8-217ENST00000576353 PASKQ96RG2 1323 aa29.26■■■□□ 2.27
SNF8-217ENST00000576353 GTF2IP78347 998 aa29.26■■■□□ 2.27
SNF8-217ENST00000576353 TBC1D10BQ4KMP7 808 aaPredicted RBP29.26■■■□□ 2.27
SNF8-217ENST00000576353 COPRSQ9NQ92 184 aa29.26■■■□□ 2.27
SNF8-217ENST00000576353 HIBADHP31937 336 aaKnown RBP29.25■■■□□ 2.27
SNF8-217ENST00000576353 ZNF280AP59817 542 aaPredicted RBP29.25■■■□□ 2.27
SNF8-217ENST00000576353 PUM3Q15397 648 aaKnown RBP29.25■■■□□ 2.27
SNF8-217ENST00000576353 RBM26Q5T8P6 1007 aaKnown RBP29.25■■■□□ 2.27
SNF8-217ENST00000576353 ATG9AQ7Z3C6 839 aa29.25■■■□□ 2.27
SNF8-217ENST00000576353 SIL1Q9H173 461 aa29.25■■■□□ 2.27
SNF8-217ENST00000576353 MMP14P50281 582 aa29.24■■■□□ 2.27
SNF8-217ENST00000576353 OGFOD1Q8N543 542 aa29.24■■■□□ 2.27
SNF8-217ENST00000576353 FAM84BQ96KN1 310 aaPredicted RBP29.24■■■□□ 2.27
SNF8-217ENST00000576353 IFIT1P09914 478 aaKnown RBP29.23■■■□□ 2.27
SNF8-217ENST00000576353 IL15P40933 162 aaPredicted RBP29.23■■■□□ 2.27
SNF8-217ENST00000576353 GYG1P46976 350 aa29.23■■■□□ 2.27
SNF8-217ENST00000576353 KIF4BQ2VIQ3 1234 aa29.23■■■□□ 2.27
SNF8-217ENST00000576353 CAVIN4Q5BKX8 364 aa29.23■■■□□ 2.27
SNF8-217ENST00000576353 VPS37DQ86XT2 251 aa29.23■■■□□ 2.27
SNF8-217ENST00000576353 MXD3Q9BW11 206 aa29.23■■■□□ 2.27
SNF8-217ENST00000576353 CEP126Q9P2H0 1117 aa29.23■■■□□ 2.27
SNF8-217ENST00000576353 PA2G4Q9UQ80 394 aaKnown RBP29.23■■■□□ 2.27
SNF8-217ENST00000576353 ZBTB7BO15156 539 aaPredicted RBP29.22■■■□□ 2.27
SNF8-217ENST00000576353 SASH1O94885 1247 aa29.22■■■□□ 2.27
SNF8-217ENST00000576353 PANK1Q8TE04 598 aa29.22■■■□□ 2.27
SNF8-217ENST00000576353 A0A1B0GUL6 1792 aa29.21■■■□□ 2.27
SNF8-217ENST00000576353 HTRA3P83110 453 aa29.21■■■□□ 2.27
SNF8-217ENST00000576353 TDRD7Q8NHU6 1098 aaKnown RBP29.21■■■□□ 2.27
SNF8-217ENST00000576353 LPIN2Q92539 896 aa29.21■■■□□ 2.27
SNF8-217ENST00000576353 CREBZFQ9NS37 354 aa29.21■■■□□ 2.27
SNF8-217ENST00000576353 EGFRP00533 1210 aa29.2■■■□□ 2.26
SNF8-217ENST00000576353 FGFR2P21802 821 aa29.2■■■□□ 2.26
SNF8-217ENST00000576353 FBXO33Q7Z6M2 555 aa29.2■■■□□ 2.26
SNF8-217ENST00000576353 MYOZ2Q9NPC6 264 aa29.2■■■□□ 2.26
SNF8-217ENST00000576353 SLC5A1P13866 664 aa29.19■■■□□ 2.26
SNF8-217ENST00000576353 FKBP1AP62942 108 aaKnown RBP29.19■■■□□ 2.26
SNF8-217ENST00000576353 CDC37L1Q7L3B6 337 aa29.19■■■□□ 2.26
SNF8-217ENST00000576353 PSME4Q14997 1843 aa29.19■■■□□ 2.26
SNF8-217ENST00000576353 TMEM88BA6NKF7 163 aa29.18■■■□□ 2.26
SNF8-217ENST00000576353 DNAJC5GQ8N7S2 189 aa29.18■■■□□ 2.26
SNF8-217ENST00000576353 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.18■■■□□ 2.26
SNF8-217ENST00000576353 HDAC9Q9UKV0 1011 aa29.18■■■□□ 2.26
SNF8-217ENST00000576353 FAM205AQ6ZU69 1335 aa29.18■■■□□ 2.26
SNF8-217ENST00000576353 KIAA0825Q8IV33 1275 aa29.17■■■□□ 2.26
SNF8-217ENST00000576353 DCPSQ96C86 337 aaKnown RBP29.17■■■□□ 2.26
SNF8-217ENST00000576353 YTHDC1Q96MU7 727 aaKnown RBP29.17■■■□□ 2.26
SNF8-217ENST00000576353 PNMA6EA0A0J9YXQ4 647 aa29.16■■■□□ 2.26
SNF8-217ENST00000576353 GLIS2Q9BZE0 524 aaPredicted RBP29.16■■■□□ 2.26
SNF8-217ENST00000576353 FRAT2O75474 233 aaPredicted RBP29.15■■■□□ 2.26
SNF8-217ENST00000576353 BCAMP50895 628 aa29.15■■■□□ 2.26
SNF8-217ENST00000576353 ATP8B2P98198 1209 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms