RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 RCAN3Q9UKA8 241 aa25.87■■□□□ 1.73
HCFC1R1-208ENST00000575214 VIL1P09327 827 aaKnown RBP25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 RPS12P25398 132 aaKnown RBP25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 USP50Q70EL3 339 aaPredicted RBP25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 ITPRIPQ8IWB1 547 aa25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 MICALL2Q8IY33 904 aa25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 DPF2Q92785 391 aa25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 YTHDC1Q96MU7 727 aaKnown RBP25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 A0A1B0GUL6 1792 aa25.86■■□□□ 1.73
HCFC1R1-208ENST00000575214 SCN9AQ15858 1988 aa25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 USP17L3A6NCW0 530 aa25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 USP17L4A6NCW7 530 aa25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 RLBP1P12271 317 aa25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 PTPN12Q05209 780 aaKnown RBP25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 C15orf52Q6ZUT6 534 aaKnown RBP25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 USP17L1Q7RTZ2 530 aa25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 FBXW7Q969H0 707 aa25.85■■□□□ 1.73
HCFC1R1-208ENST00000575214 SHTN1A0MZ66 631 aa25.84■■□□□ 1.73
HCFC1R1-208ENST00000575214 H7C1D1 291 aa25.84■■□□□ 1.73
HCFC1R1-208ENST00000575214 GNAI2P04899 355 aa25.84■■□□□ 1.73
HCFC1R1-208ENST00000575214 UBE4AQ14139 1066 aa25.84■■□□□ 1.73
HCFC1R1-208ENST00000575214 IRS2Q9Y4H2 1338 aa25.84■■□□□ 1.73
HCFC1R1-208ENST00000575214 EYA2O00167 538 aa25.83■■□□□ 1.73
HCFC1R1-208ENST00000575214 RSBN1LQ6PCB5 846 aaPredicted RBP25.83■■□□□ 1.73
HCFC1R1-208ENST00000575214 ZNF804AQ7Z570 1209 aa25.83■■□□□ 1.73
HCFC1R1-208ENST00000575214 APLP1P51693 650 aa25.82■■□□□ 1.72
HCFC1R1-208ENST00000575214 SIL1Q9H173 461 aa25.82■■□□□ 1.72
HCFC1R1-208ENST00000575214 CD209Q9NNX6 404 aa25.82■■□□□ 1.72
HCFC1R1-208ENST00000575214 AGBL3Q8NEM8 1001 aa25.82■■□□□ 1.72
HCFC1R1-208ENST00000575214 ADAMTSL1Q8N6G6 1762 aa25.81■■□□□ 1.72
HCFC1R1-208ENST00000575214 SRGAP3O43295 1099 aa25.81■■□□□ 1.72
HCFC1R1-208ENST00000575214 MAP1SQ66K74 1059 aaPredicted RBP25.81■■□□□ 1.72
HCFC1R1-208ENST00000575214 TRPM4Q8TD43 1214 aa25.81■■□□□ 1.72
HCFC1R1-208ENST00000575214 PANK1Q8TE04 598 aa25.81■■□□□ 1.72
HCFC1R1-208ENST00000575214 PDE8BO95263 885 aa25.8■■□□□ 1.72
HCFC1R1-208ENST00000575214 MS4A1P11836 297 aa25.8■■□□□ 1.72
HCFC1R1-208ENST00000575214 STRIP1Q5VSL9 837 aa25.8■■□□□ 1.72
HCFC1R1-208ENST00000575214 TTLL5Q6EMB2 1281 aa25.8■■□□□ 1.72
HCFC1R1-208ENST00000575214 VGLL2Q8N8G2 317 aa25.8■■□□□ 1.72
HCFC1R1-208ENST00000575214 PA2G4Q9UQ80 394 aaKnown RBP25.8■■□□□ 1.72
HCFC1R1-208ENST00000575214 GTF2IP78347 998 aa25.79■■□□□ 1.72
HCFC1R1-208ENST00000575214 MTX1Q13505 466 aa25.79■■□□□ 1.72
HCFC1R1-208ENST00000575214 DACT2Q5SW24 774 aa25.79■■□□□ 1.72
HCFC1R1-208ENST00000575214 SAMD7Q7Z3H4 446 aa25.79■■□□□ 1.72
HCFC1R1-208ENST00000575214 CNTROBQ8N137 903 aa25.79■■□□□ 1.72
HCFC1R1-208ENST00000575214 FBXO3Q9UK99 471 aa25.79■■□□□ 1.72
HCFC1R1-208ENST00000575214 ZNF609O15014 1411 aa25.79■■□□□ 1.72
HCFC1R1-208ENST00000575214 CIAO1O76071 339 aa25.78■■□□□ 1.72
HCFC1R1-208ENST00000575214 TBC1D10BQ4KMP7 808 aaPredicted RBP25.78■■□□□ 1.72
HCFC1R1-208ENST00000575214 ATG9AQ7Z3C6 839 aa25.78■■□□□ 1.72
HCFC1R1-208ENST00000575214 MXD3Q9BW11 206 aa25.78■■□□□ 1.72
HCFC1R1-208ENST00000575214 PSME4Q14997 1843 aa25.77■■□□□ 1.72
HCFC1R1-208ENST00000575214 GYG1P46976 350 aa25.77■■□□□ 1.72
HCFC1R1-208ENST00000575214 RBM26Q5T8P6 1007 aaKnown RBP25.77■■□□□ 1.72
HCFC1R1-208ENST00000575214 GMLQ99445 158 aa25.77■■□□□ 1.72
HCFC1R1-208ENST00000575214 COPRSQ9NQ92 184 aa25.77■■□□□ 1.72
HCFC1R1-208ENST00000575214 MYO3BQ8WXR4 1341 aa25.76■■□□□ 1.71
HCFC1R1-208ENST00000575214 ZBTB7BO15156 539 aaPredicted RBP25.76■■□□□ 1.71
HCFC1R1-208ENST00000575214 IL1R1P14778 569 aa25.76■■□□□ 1.71
HCFC1R1-208ENST00000575214 HIBADHP31937 336 aaKnown RBP25.76■■□□□ 1.71
HCFC1R1-208ENST00000575214 HIRAP54198 1017 aaPredicted RBP25.76■■□□□ 1.71
HCFC1R1-208ENST00000575214 PUM3Q15397 648 aaKnown RBP25.76■■□□□ 1.71
HCFC1R1-208ENST00000575214 C1orf115Q9H7X2 142 aa25.76■■□□□ 1.71
HCFC1R1-208ENST00000575214 ITGBL1O95965 494 aaPredicted RBP25.75■■□□□ 1.71
HCFC1R1-208ENST00000575214 USP17L8P0C7I0 530 aa25.75■■□□□ 1.71
HCFC1R1-208ENST00000575214 IL15P40933 162 aaPredicted RBP25.75■■□□□ 1.71
HCFC1R1-208ENST00000575214 KIF4BQ2VIQ3 1234 aa25.75■■□□□ 1.71
HCFC1R1-208ENST00000575214 VPS37DQ86XT2 251 aa25.75■■□□□ 1.71
HCFC1R1-208ENST00000575214 FAM84BQ96KN1 310 aaPredicted RBP25.75■■□□□ 1.71
HCFC1R1-208ENST00000575214 CEP126Q9P2H0 1117 aa25.75■■□□□ 1.71
HCFC1R1-208ENST00000575214 EGFRP00533 1210 aa25.74■■□□□ 1.71
HCFC1R1-208ENST00000575214 IFIT1P09914 478 aaKnown RBP25.74■■□□□ 1.71
HCFC1R1-208ENST00000575214 HTRA3P83110 453 aa25.74■■□□□ 1.71
HCFC1R1-208ENST00000575214 CAVIN4Q5BKX8 364 aa25.74■■□□□ 1.71
HCFC1R1-208ENST00000575214 PASKQ96RG2 1323 aa25.73■■□□□ 1.71
HCFC1R1-208ENST00000575214 PNMA6EA0A0J9YXQ4 647 aa25.73■■□□□ 1.71
HCFC1R1-208ENST00000575214 ZNF280AP59817 542 aaPredicted RBP25.73■■□□□ 1.71
HCFC1R1-208ENST00000575214 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.73■■□□□ 1.71
HCFC1R1-208ENST00000575214 ZC3H15Q8WU90 426 aaKnown RBP25.73■■□□□ 1.71
HCFC1R1-208ENST00000575214 SLC5A1P13866 664 aa25.72■■□□□ 1.71
HCFC1R1-208ENST00000575214 FGFR2P21802 821 aa25.72■■□□□ 1.71
HCFC1R1-208ENST00000575214 JAG2Q9Y219 1238 aa25.72■■□□□ 1.71
HCFC1R1-208ENST00000575214 OGFOD1Q8N543 542 aa25.71■■□□□ 1.71
HCFC1R1-208ENST00000575214 TDRD7Q8NHU6 1098 aaKnown RBP25.71■■□□□ 1.71
HCFC1R1-208ENST00000575214 LPIN2Q92539 896 aa25.71■■□□□ 1.71
HCFC1R1-208ENST00000575214 MYOZ2Q9NPC6 264 aa25.71■■□□□ 1.71
HCFC1R1-208ENST00000575214 MVPQ14764 893 aaKnown RBP25.7■■□□□ 1.71
HCFC1R1-208ENST00000575214 FBXO33Q7Z6M2 555 aa25.7■■□□□ 1.71
HCFC1R1-208ENST00000575214 KIAA0825Q8IV33 1275 aa25.7■■□□□ 1.71
HCFC1R1-208ENST00000575214 PGAP2Q9UHJ9 254 aa25.7■■□□□ 1.71
HCFC1R1-208ENST00000575214 COG6Q9Y2V7 657 aa25.7■■□□□ 1.71
HCFC1R1-208ENST00000575214 FRAT2O75474 233 aaPredicted RBP25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 SASH1O94885 1247 aa25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 ATP2B3Q16720 1220 aa25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 HDAC9Q9UKV0 1011 aa25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 IQSEC3Q9UPP2 1182 aaPredicted RBP25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 ZNF646O15015 1829 aaPredicted RBP25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 BCAMP50895 628 aa25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 ATP8B2P98198 1209 aa25.69■■□□□ 1.7
HCFC1R1-208ENST00000575214 DDX19BQ9UMR2 479 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms