RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 RFX5P48382 616 aaPredicted RBP12.22□□□□□ -0.45
NDE1-210ENST00000574163 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
NDE1-210ENST00000574163 PODNQ7Z5L7 613 aa12.22□□□□□ -0.45
NDE1-210ENST00000574163 PNMA8AQ86V59 439 aaPredicted RBP12.22□□□□□ -0.45
NDE1-210ENST00000574163 TMEM57Q8N5G2 664 aa12.22□□□□□ -0.45
NDE1-210ENST00000574163 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
NDE1-210ENST00000574163 COA1Q9GZY4 146 aa12.22□□□□□ -0.45
NDE1-210ENST00000574163 GPRC5DQ9NZD1 345 aa12.22□□□□□ -0.45
NDE1-210ENST00000574163 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
NDE1-210ENST00000574163 RAD17O75943 681 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 CIAO1O76071 339 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 GNAI2P04899 355 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 RLBP1P12271 317 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 EPHX2P34913 555 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 GMPSP49915 693 aaPredicted RBP12.21□□□□□ -0.45
NDE1-210ENST00000574163 UBE4AQ14139 1066 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 LDHDQ86WU2 507 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 DPF2Q92785 391 aa12.21□□□□□ -0.45
NDE1-210ENST00000574163 MYH13Q9UKX3 1938 aa12.2□□□□□ -0.46
NDE1-210ENST00000574163 EYA2O00167 538 aa12.2□□□□□ -0.46
NDE1-210ENST00000574163 PSMD14O00487 310 aa12.2□□□□□ -0.46
NDE1-210ENST00000574163 VIL1P09327 827 aaKnown RBP12.2□□□□□ -0.46
NDE1-210ENST00000574163 PTPN12Q05209 780 aaKnown RBP12.2□□□□□ -0.46
NDE1-210ENST00000574163 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
NDE1-210ENST00000574163 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
NDE1-210ENST00000574163 VGLL2Q8N8G2 317 aa12.2□□□□□ -0.46
NDE1-210ENST00000574163 MYO3BQ8WXR4 1341 aa12.19□□□□□ -0.46
NDE1-210ENST00000574163 KLRK1P26718 216 aa12.19□□□□□ -0.46
NDE1-210ENST00000574163 CACNB1Q02641 598 aaPredicted RBP12.19□□□□□ -0.46
NDE1-210ENST00000574163 LRRC24Q50LG9 513 aa12.19□□□□□ -0.46
NDE1-210ENST00000574163 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
NDE1-210ENST00000574163 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
NDE1-210ENST00000574163 ZNF804AQ7Z570 1209 aa12.19□□□□□ -0.46
NDE1-210ENST00000574163 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
NDE1-210ENST00000574163 AGBL3Q8NEM8 1001 aa12.19□□□□□ -0.46
NDE1-210ENST00000574163 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
NDE1-210ENST00000574163 PUS3Q9BZE2 481 aaKnown RBP12.19□□□□□ -0.46
NDE1-210ENST00000574163 COPRSQ9NQ92 184 aa12.19□□□□□ -0.46
NDE1-210ENST00000574163 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
NDE1-210ENST00000574163 ADARB2Q9NS39 739 aaKnown RBP12.19□□□□□ -0.46
NDE1-210ENST00000574163 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 WTIPA6NIX2 430 aaPredicted RBP12.18□□□□□ -0.46
NDE1-210ENST00000574163 TAF5LO75529 589 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 PDE8BO95263 885 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 HSPA6P17066 643 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 EPS15P42566 896 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 MMP14P50281 582 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
NDE1-210ENST00000574163 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
NDE1-210ENST00000574163 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 TXNRD3Q86VQ6 643 aa12.18□□□□□ -0.46
NDE1-210ENST00000574163 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 IL1R1P14778 569 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 MVPQ14764 893 aaKnown RBP12.17□□□□□ -0.46
NDE1-210ENST00000574163 ATG9AQ7Z3C6 839 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 MICALL2Q8IY33 904 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 KLHDC4Q8TBB5 520 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 GMLQ99445 158 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 CD209Q9NNX6 404 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
NDE1-210ENST00000574163 H7C1D1 291 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 ZBTB7BO15156 539 aaPredicted RBP12.16□□□□□ -0.46
NDE1-210ENST00000574163 FGFR2P21802 821 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 IL15P40933 162 aaPredicted RBP12.16□□□□□ -0.46
NDE1-210ENST00000574163 ZNF280AP59817 542 aaPredicted RBP12.16□□□□□ -0.46
NDE1-210ENST00000574163 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
NDE1-210ENST00000574163 DACT2Q5SW24 774 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 ZC3H15Q8WU90 426 aaKnown RBP12.16□□□□□ -0.46
NDE1-210ENST00000574163 CHMP4BQ9H444 224 aaKnown RBP12.16□□□□□ -0.46
NDE1-210ENST00000574163 KCNQ5Q9NR82 932 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 CNOT7Q9UIV1 285 aaKnown RBP12.16□□□□□ -0.46
NDE1-210ENST00000574163 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 CEP350Q5VT06 3117 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 ECM29Q5VYK3 1845 aa12.16□□□□□ -0.46
NDE1-210ENST00000574163 SNAP23O00161 211 aa12.15□□□□□ -0.46
NDE1-210ENST00000574163 PLIN1O60240 522 aa12.15□□□□□ -0.46
NDE1-210ENST00000574163 IFIT1P09914 478 aaKnown RBP12.15□□□□□ -0.46
NDE1-210ENST00000574163 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
NDE1-210ENST00000574163 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
NDE1-210ENST00000574163 APLP1P51693 650 aa12.15□□□□□ -0.46
NDE1-210ENST00000574163 FKBP1AP62942 108 aaKnown RBP12.15□□□□□ -0.46
NDE1-210ENST00000574163 FAM205AQ6ZU69 1335 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 SLC5A1P13866 664 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
NDE1-210ENST00000574163 TRPM4Q8TD43 1214 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 LPIN2Q92539 896 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 SIL1Q9H173 461 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 PGAP2Q9UHJ9 254 aa12.14□□□□□ -0.47
NDE1-210ENST00000574163 PA2G4Q9UQ80 394 aaKnown RBP12.14□□□□□ -0.47
NDE1-210ENST00000574163 PASKQ96RG2 1323 aa12.13□□□□□ -0.47
NDE1-210ENST00000574163 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
NDE1-210ENST00000574163 USP17L8P0C7I0 530 aa12.13□□□□□ -0.47
NDE1-210ENST00000574163 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms