RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 E7EWF7 191 aa22.36■■□□□ 1.17
SCARF1-206ENST00000573852 ZSCAN20P17040 1043 aaPredicted RBP22.36■■□□□ 1.17
SCARF1-206ENST00000573852 CHST3Q7LGC8 479 aa22.36■■□□□ 1.17
SCARF1-206ENST00000573852 ILDR1Q86SU0 546 aaPredicted RBP22.36■■□□□ 1.17
SCARF1-206ENST00000573852 NCBP1Q09161 790 aaKnown RBP22.35■■□□□ 1.17
SCARF1-206ENST00000573852 ZMYM1Q5SVZ6 1142 aa22.35■■□□□ 1.17
SCARF1-206ENST00000573852 LRRC8AQ8IWT6 810 aa22.35■■□□□ 1.17
SCARF1-206ENST00000573852 NAP1L2Q9ULW6 460 aaPredicted RBP22.35■■□□□ 1.17
SCARF1-206ENST00000573852 CYP27B1O15528 508 aa22.35■■□□□ 1.17
SCARF1-206ENST00000573852 TPD52L1Q16890 204 aaPredicted RBP22.35■■□□□ 1.17
SCARF1-206ENST00000573852 CCDC73Q6ZRK6 1079 aa22.35■■□□□ 1.17
SCARF1-206ENST00000573852 PLBD2Q8NHP8 589 aa22.35■■□□□ 1.17
SCARF1-206ENST00000573852 MRFAP1L1Q96HT8 127 aa22.35■■□□□ 1.17
SCARF1-206ENST00000573852 SPDYE4A6NLX3 237 aa22.34■■□□□ 1.17
SCARF1-206ENST00000573852 HSPD1P10809 573 aaKnown RBP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 PDIA3P30101 505 aaKnown RBP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 DHX40Q8IX18 779 aaKnown RBP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 U2AF2P26368 475 aaKnown RBP eCLIP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 ZNF396Q96N95 335 aaPredicted RBP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 KINO60870 393 aaKnown RBP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 FAM160A1Q05DH4 1040 aa22.34■■□□□ 1.17
SCARF1-206ENST00000573852 ERCC4Q92889 916 aaPredicted RBP22.34■■□□□ 1.17
SCARF1-206ENST00000573852 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
SCARF1-206ENST00000573852 FSIP1Q8NA03 581 aa22.33■■□□□ 1.17
SCARF1-206ENST00000573852 H7C1W4 665 aa22.33■■□□□ 1.16
SCARF1-206ENST00000573852 ME1P48163 572 aa22.33■■□□□ 1.16
SCARF1-206ENST00000573852 MAST3O60307 1309 aa22.32■■□□□ 1.16
SCARF1-206ENST00000573852 ATL3Q6DD88 541 aa22.32■■□□□ 1.16
SCARF1-206ENST00000573852 USP27XA6NNY8 438 aa22.32■■□□□ 1.16
SCARF1-206ENST00000573852 BECN2A8MW95 431 aa22.32■■□□□ 1.16
SCARF1-206ENST00000573852 DMTNQ08495 405 aa22.32■■□□□ 1.16
SCARF1-206ENST00000573852 NAA30Q147X3 362 aaPredicted RBP22.32■■□□□ 1.16
SCARF1-206ENST00000573852 TTLL5Q6EMB2 1281 aa22.32■■□□□ 1.16
SCARF1-206ENST00000573852 PAXBP1Q9Y5B6 917 aa22.32■■□□□ 1.16
SCARF1-206ENST00000573852 FDPSP14324 419 aaKnown RBP22.31■■□□□ 1.16
SCARF1-206ENST00000573852 ZNF274Q96GC6 653 aaPredicted RBP22.31■■□□□ 1.16
SCARF1-206ENST00000573852 RBM6P78332 1123 aaKnown RBP22.31■■□□□ 1.16
SCARF1-206ENST00000573852 ANO10Q9NW15 660 aa22.31■■□□□ 1.16
SCARF1-206ENST00000573852 CARMIL3Q8ND23 1372 aa22.31■■□□□ 1.16
SCARF1-206ENST00000573852 NBPF26B4DH59 902 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 LRRC24Q50LG9 513 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 NBPF14Q5TI25 921 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 NBPF10Q6P3W6 841 aaKnown RBP22.3■■□□□ 1.16
SCARF1-206ENST00000573852 NBPF15Q8N660 670 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 ZNF594Q96JF6 807 aaPredicted RBP22.3■■□□□ 1.16
SCARF1-206ENST00000573852 GPR108Q9NPR9 543 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 GPHNQ9NQX3 736 aaPredicted RBP22.3■■□□□ 1.16
SCARF1-206ENST00000573852 PCDHA7Q9UN72 937 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 SYCP1Q15431 976 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 CCDC112Q8NEF3 446 aa22.3■■□□□ 1.16
SCARF1-206ENST00000573852 M0R2C6 588 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 RNF113AO15541 343 aaKnown RBP22.29■■□□□ 1.16
SCARF1-206ENST00000573852 CSB-PGBD3P0DP91 1061 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 CABP4P57796 275 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 CEP135Q66GS9 1140 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 FBXW7Q969H0 707 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 IFIT1P09914 478 aaKnown RBP22.29■■□□□ 1.16
SCARF1-206ENST00000573852 SKILP12757 684 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 IL15P40933 162 aaPredicted RBP22.29■■□□□ 1.16
SCARF1-206ENST00000573852 TTLL7Q6ZT98 887 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 FILIP1Q7Z7B0 1213 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 AOPEPQ8N6M6 819 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 ZNF592Q92610 1267 aa22.29■■□□□ 1.16
SCARF1-206ENST00000573852 NEMFO60524 1076 aa22.28■■□□□ 1.16
SCARF1-206ENST00000573852 FMR1NBQ8N0W7 255 aaPredicted RBP22.28■■□□□ 1.16
SCARF1-206ENST00000573852 UTP14CQ5TAP6 766 aaKnown RBP22.28■■□□□ 1.16
SCARF1-206ENST00000573852 OTUD7BQ6GQQ9 843 aa22.28■■□□□ 1.16
SCARF1-206ENST00000573852 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
SCARF1-206ENST00000573852 GLI3P10071 1580 aa22.28■■□□□ 1.16
SCARF1-206ENST00000573852 CCDC69A6NI79 296 aa22.27■■□□□ 1.16
SCARF1-206ENST00000573852 CCZ1BP86790 482 aa22.27■■□□□ 1.16
SCARF1-206ENST00000573852 CCZ1P86791 482 aaPredicted RBP22.27■■□□□ 1.16
SCARF1-206ENST00000573852 ALS2Q96Q42 1657 aa22.27■■□□□ 1.16
SCARF1-206ENST00000573852 ZNF142P52746 1687 aaPredicted RBP22.27■■□□□ 1.16
SCARF1-206ENST00000573852 A0A1B0GVL5 298 aa22.27■■□□□ 1.16
SCARF1-206ENST00000573852 CEP57L1Q8IYX8 460 aa22.27■■□□□ 1.16
SCARF1-206ENST00000573852 MRPS27Q92552 414 aaKnown RBP22.27■■□□□ 1.16
SCARF1-206ENST00000573852 OSBP2Q969R2 916 aa22.27■■□□□ 1.16
SCARF1-206ENST00000573852 CWC25Q9NXE8 425 aaPredicted RBP22.27■■□□□ 1.16
SCARF1-206ENST00000573852 RTEL1Q9NZ71 1219 aa22.27■■□□□ 1.16
SCARF1-206ENST00000573852 MST1RQ04912 1400 aa22.27■■□□□ 1.15
SCARF1-206ENST00000573852 A0A1B0GUL7 405 aa22.26■■□□□ 1.15
SCARF1-206ENST00000573852 EYA2O00167 538 aa22.26■■□□□ 1.15
SCARF1-206ENST00000573852 DDX17Q92841 729 aaKnown RBP22.26■■□□□ 1.15
SCARF1-206ENST00000573852 KIF1AQ12756 1690 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 CHRNA2Q15822 529 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 ADALQ6DHV7 355 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 NYAP1Q6ZVC0 841 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 TICAM2Q86XR7 235 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 PUS3Q9BZE2 481 aaKnown RBP22.25■■□□□ 1.15
SCARF1-206ENST00000573852 NDUFA8P51970 172 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
SCARF1-206ENST00000573852 CABLES1Q8TDN4 633 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 SDF4Q9BRK5 362 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 BCL11BQ9C0K0 894 aaPredicted RBP22.25■■□□□ 1.15
SCARF1-206ENST00000573852 CLIC4Q9Y696 253 aa22.25■■□□□ 1.15
SCARF1-206ENST00000573852 EVCP57679 992 aa22.24■■□□□ 1.15
SCARF1-206ENST00000573852 LINC00301Q8NCQ3 95 aa22.24■■□□□ 1.15
SCARF1-206ENST00000573852 ZHX1Q9UKY1 873 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms