RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 CHRNDQ07001 517 aa20.6■□□□□ 0.89
RAB40B-208ENST00000573395 CYP4F22Q6NT55 531 aa20.6■□□□□ 0.89
RAB40B-208ENST00000573395 LMBR1LQ6UX01 489 aa20.6■□□□□ 0.89
RAB40B-208ENST00000573395 SULF1Q8IWU6 871 aa20.6■□□□□ 0.89
RAB40B-208ENST00000573395 TRPM7Q96QT4 1865 aa20.59■□□□□ 0.89
RAB40B-208ENST00000573395 FOXN1O15353 648 aa20.59■□□□□ 0.89
RAB40B-208ENST00000573395 CTCFP49711 727 aaPredicted RBP20.59■□□□□ 0.89
RAB40B-208ENST00000573395 SAPCD2Q86UD0 394 aa20.59■□□□□ 0.89
RAB40B-208ENST00000573395 BEGAINQ9BUH8 593 aa20.59■□□□□ 0.89
RAB40B-208ENST00000573395 GGA3Q9NZ52 723 aa20.59■□□□□ 0.89
RAB40B-208ENST00000573395 SCN9AQ15858 1988 aa20.58■□□□□ 0.89
RAB40B-208ENST00000573395 ZNF280AP59817 542 aaPredicted RBP20.58■□□□□ 0.89
RAB40B-208ENST00000573395 OGFOD1Q8N543 542 aa20.58■□□□□ 0.89
RAB40B-208ENST00000573395 WBP1LQ9NX94 342 aa20.58■□□□□ 0.89
RAB40B-208ENST00000573395 MYO3BQ8WXR4 1341 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 ADM5C9JUS6 153 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 ZNF609O15014 1411 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 SLFN5Q08AF3 891 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 SCARF1Q14162 830 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 STRIP1Q5VSL9 837 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 LDHAL6AQ6ZMR3 332 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 MRPL50Q8N5N7 158 aaKnown RBP20.57■□□□□ 0.88
RAB40B-208ENST00000573395 HELBQ8NG08 1087 aaPredicted RBP20.57■□□□□ 0.88
RAB40B-208ENST00000573395 MYOZ2Q9NPC6 264 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 CNNM1Q9NRU3 951 aa20.57■□□□□ 0.88
RAB40B-208ENST00000573395 PTPRCP08575 1304 aa20.56■□□□□ 0.88
RAB40B-208ENST00000573395 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
RAB40B-208ENST00000573395 EPHA10Q5JZY3 1008 aa20.56■□□□□ 0.88
RAB40B-208ENST00000573395 TXNRD3Q86VQ6 643 aa20.56■□□□□ 0.88
RAB40B-208ENST00000573395 C2orf69Q8N8R5 385 aa20.56■□□□□ 0.88
RAB40B-208ENST00000573395 PLIN1O60240 522 aa20.55■□□□□ 0.88
RAB40B-208ENST00000573395 TAF5LO75529 589 aa20.55■□□□□ 0.88
RAB40B-208ENST00000573395 ANGEL2Q5VTE6 544 aaKnown RBP20.55■□□□□ 0.88
RAB40B-208ENST00000573395 TTLL5Q6EMB2 1281 aa20.55■□□□□ 0.88
RAB40B-208ENST00000573395 HHIPL1Q96JK4 782 aa20.55■□□□□ 0.88
RAB40B-208ENST00000573395 GMLQ99445 158 aa20.55■□□□□ 0.88
RAB40B-208ENST00000573395 KLRK1P26718 216 aa20.54■□□□□ 0.88
RAB40B-208ENST00000573395 HUNKP57058 714 aa20.54■□□□□ 0.88
RAB40B-208ENST00000573395 DACT2Q5SW24 774 aa20.54■□□□□ 0.88
RAB40B-208ENST00000573395 DLK2Q6UY11 383 aa20.54■□□□□ 0.88
RAB40B-208ENST00000573395 SSH1Q8WYL5 1049 aa20.54■□□□□ 0.88
RAB40B-208ENST00000573395 ZNF594Q96JF6 807 aaPredicted RBP20.54■□□□□ 0.88
RAB40B-208ENST00000573395 MXD3Q9BW11 206 aa20.54■□□□□ 0.88
RAB40B-208ENST00000573395 GBA2Q9HCG7 927 aaPredicted RBP20.54■□□□□ 0.88
RAB40B-208ENST00000573395 ASTN2O75129 1339 aaPredicted RBP20.53■□□□□ 0.88
RAB40B-208ENST00000573395 MAP2K2P36507 400 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 GTF2IP78347 998 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 ZNF804AQ7Z570 1209 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 CDCA7LQ96GN5 454 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 SUCLG2Q96I99 432 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 PRDM10Q9NQV6 1147 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 SMC4Q9NTJ3 1288 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 HDAC9Q9UKV0 1011 aa20.53■□□□□ 0.88
RAB40B-208ENST00000573395 AOC2O75106 756 aa20.52■□□□□ 0.88
RAB40B-208ENST00000573395 NBPF7P0C2Y1 421 aaPredicted RBP20.52■□□□□ 0.88
RAB40B-208ENST00000573395 LBX1P52954 281 aa20.52■□□□□ 0.88
RAB40B-208ENST00000573395 CD209Q9NNX6 404 aa20.52■□□□□ 0.88
RAB40B-208ENST00000573395 SNAP23O00161 211 aa20.51■□□□□ 0.87
RAB40B-208ENST00000573395 CAPN15O75808 1086 aa20.51■□□□□ 0.87
RAB40B-208ENST00000573395 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
RAB40B-208ENST00000573395 CDCA5Q96FF9 252 aa20.51■□□□□ 0.87
RAB40B-208ENST00000573395 PSME4Q14997 1843 aa20.5■□□□□ 0.87
RAB40B-208ENST00000573395 MMP14P50281 582 aa20.5■□□□□ 0.87
RAB40B-208ENST00000573395 KIAA0825Q8IV33 1275 aa20.5■□□□□ 0.87
RAB40B-208ENST00000573395 PITPNM2Q9BZ72 1349 aa20.5■□□□□ 0.87
RAB40B-208ENST00000573395 NOGQ13253 232 aa20.49■□□□□ 0.87
RAB40B-208ENST00000573395 C15orf52Q6ZUT6 534 aaKnown RBP20.49■□□□□ 0.87
RAB40B-208ENST00000573395 BICC1Q9H694 974 aaKnown RBP20.49■□□□□ 0.87
RAB40B-208ENST00000573395 UTYO14607 1347 aa20.49■□□□□ 0.87
RAB40B-208ENST00000573395 CT47B1P0C2W7 299 aaPredicted RBP20.48■□□□□ 0.87
RAB40B-208ENST00000573395 HSPA8P11142 646 aaKnown RBP20.48■□□□□ 0.87
RAB40B-208ENST00000573395 NBPF9Q3BBW0 867 aa20.48■□□□□ 0.87
RAB40B-208ENST00000573395 RGMBQ6NW40 437 aa20.48■□□□□ 0.87
RAB40B-208ENST00000573395 PCNTO95613 3336 aa20.48■□□□□ 0.87
RAB40B-208ENST00000573395 SASH1O94885 1247 aa20.47■□□□□ 0.87
RAB40B-208ENST00000573395 ZNF157P51786 506 aaPredicted RBP20.47■□□□□ 0.87
RAB40B-208ENST00000573395 CCDC102AQ96A19 550 aa20.47■□□□□ 0.87
RAB40B-208ENST00000573395 KAZALD1Q96I82 304 aa20.47■□□□□ 0.87
RAB40B-208ENST00000573395 THSD7BQ9C0I4 1608 aa20.46■□□□□ 0.87
RAB40B-208ENST00000573395 WNT10BO00744 389 aa20.46■□□□□ 0.87
RAB40B-208ENST00000573395 BRPF1P55201 1214 aaPredicted RBP20.46■□□□□ 0.87
RAB40B-208ENST00000573395 MROH5Q6ZUA9 1318 aa20.46■□□□□ 0.87
RAB40B-208ENST00000573395 CA12O43570 354 aa20.45■□□□□ 0.86
RAB40B-208ENST00000573395 IL1R1P14778 569 aa20.45■□□□□ 0.86
RAB40B-208ENST00000573395 NF2P35240 595 aa20.45■□□□□ 0.86
RAB40B-208ENST00000573395 UBE4AQ14139 1066 aa20.45■□□□□ 0.86
RAB40B-208ENST00000573395 PUS3Q9BZE2 481 aaKnown RBP20.45■□□□□ 0.86
RAB40B-208ENST00000573395 SCAF8Q9UPN6 1271 aaKnown RBP20.45■□□□□ 0.86
RAB40B-208ENST00000573395 F8W031 263 aaPredicted RBP20.44■□□□□ 0.86
RAB40B-208ENST00000573395 FKBP1BP68106 108 aa20.44■□□□□ 0.86
RAB40B-208ENST00000573395 TTLL12Q14166 644 aaPredicted RBP20.44■□□□□ 0.86
RAB40B-208ENST00000573395 DLGAP5Q15398 846 aa20.44■□□□□ 0.86
RAB40B-208ENST00000573395 RABL6Q3YEC7 729 aaPredicted RBP20.44■□□□□ 0.86
RAB40B-208ENST00000573395 APOBEC3FQ8IUX4 373 aaKnown RBP20.44■□□□□ 0.86
RAB40B-208ENST00000573395 TRMT2AQ8IZ69 625 aaKnown RBP20.44■□□□□ 0.86
RAB40B-208ENST00000573395 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
RAB40B-208ENST00000573395 IRS2Q9Y4H2 1338 aa20.44■□□□□ 0.86
RAB40B-208ENST00000573395 METTL24Q5JXM2 366 aa20.43■□□□□ 0.86
RAB40B-208ENST00000573395 VPS37DQ86XT2 251 aa20.43■□□□□ 0.86
RAB40B-208ENST00000573395 ANKRD44Q8N8A2 993 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms