RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 USP17L1Q7RTZ2 530 aa24.66■■□□□ 1.54
HCFC1R1-204ENST00000573095 SPINK5Q9NQ38 1064 aaPredicted RBP24.66■■□□□ 1.54
HCFC1R1-204ENST00000573095 WTIPA6NIX2 430 aaPredicted RBP24.65■■□□□ 1.54
HCFC1R1-204ENST00000573095 BRPF1P55201 1214 aaPredicted RBP24.65■■□□□ 1.54
HCFC1R1-204ENST00000573095 HUNKP57058 714 aa24.65■■□□□ 1.54
HCFC1R1-204ENST00000573095 SULF1Q8IWU6 871 aa24.65■■□□□ 1.54
HCFC1R1-204ENST00000573095 GBA2Q9HCG7 927 aaPredicted RBP24.65■■□□□ 1.54
HCFC1R1-204ENST00000573095 LEMD3Q9Y2U8 911 aa24.65■■□□□ 1.54
HCFC1R1-204ENST00000573095 ASTN2O75129 1339 aaPredicted RBP24.64■■□□□ 1.54
HCFC1R1-204ENST00000573095 USP17L8P0C7I0 530 aa24.64■■□□□ 1.54
HCFC1R1-204ENST00000573095 CA12O43570 354 aa24.63■■□□□ 1.53
HCFC1R1-204ENST00000573095 NOGQ13253 232 aa24.63■■□□□ 1.53
HCFC1R1-204ENST00000573095 MPHOSPH8Q99549 860 aa24.63■■□□□ 1.53
HCFC1R1-204ENST00000573095 ANKRD2Q9GZV1 360 aa24.63■■□□□ 1.53
HCFC1R1-204ENST00000573095 COA1Q9GZY4 146 aa24.63■■□□□ 1.53
HCFC1R1-204ENST00000573095 PITPNM2Q9BZ72 1349 aa24.62■■□□□ 1.53
HCFC1R1-204ENST00000573095 BEND3Q5T5X7 828 aa24.62■■□□□ 1.53
HCFC1R1-204ENST00000573095 C2orf69Q8N8R5 385 aa24.62■■□□□ 1.53
HCFC1R1-204ENST00000573095 MYOZ2Q9NPC6 264 aa24.62■■□□□ 1.53
HCFC1R1-204ENST00000573095 PAPPA2Q9BXP8 1791 aa24.62■■□□□ 1.53
HCFC1R1-204ENST00000573095 ZNF804BA4D1E1 1349 aa24.61■■□□□ 1.53
HCFC1R1-204ENST00000573095 MYO3BQ8WXR4 1341 aa24.61■■□□□ 1.53
HCFC1R1-204ENST00000573095 F6X3S4 739 aa24.61■■□□□ 1.53
HCFC1R1-204ENST00000573095 SCARF1Q14162 830 aa24.61■■□□□ 1.53
HCFC1R1-204ENST00000573095 DACT2Q5SW24 774 aa24.61■■□□□ 1.53
HCFC1R1-204ENST00000573095 ANGEL2Q5VTE6 544 aaKnown RBP24.61■■□□□ 1.53
HCFC1R1-204ENST00000573095 FAM9BQ8IZU0 186 aa24.61■■□□□ 1.53
HCFC1R1-204ENST00000573095 STRIP1Q5VSL9 837 aa24.6■■□□□ 1.53
HCFC1R1-204ENST00000573095 RGMBQ6NW40 437 aa24.6■■□□□ 1.53
HCFC1R1-204ENST00000573095 TXNRD3Q86VQ6 643 aa24.6■■□□□ 1.53
HCFC1R1-204ENST00000573095 CDCA5Q96FF9 252 aa24.6■■□□□ 1.53
HCFC1R1-204ENST00000573095 ANKRD18BA2A2Z9 1011 aa24.59■■□□□ 1.53
HCFC1R1-204ENST00000573095 FAM155AB1AL88 458 aaPredicted RBP24.58■■□□□ 1.53
HCFC1R1-204ENST00000573095 KLRK1P26718 216 aa24.58■■□□□ 1.53
HCFC1R1-204ENST00000573095 FOXO4P98177 505 aa24.58■■□□□ 1.53
HCFC1R1-204ENST00000573095 CHRNDQ07001 517 aa24.58■■□□□ 1.53
HCFC1R1-204ENST00000573095 ZNF521Q96K83 1311 aa24.58■■□□□ 1.52
HCFC1R1-204ENST00000573095 TSKSQ9UJT2 592 aa24.57■■□□□ 1.52
HCFC1R1-204ENST00000573095 MMP14P50281 582 aa24.56■■□□□ 1.52
HCFC1R1-204ENST00000573095 IFIT5Q13325 482 aaKnown RBP24.56■■□□□ 1.52
HCFC1R1-204ENST00000573095 CCDC102AQ96A19 550 aa24.56■■□□□ 1.52
HCFC1R1-204ENST00000573095 ZIC5Q96T25 663 aa24.56■■□□□ 1.52
HCFC1R1-204ENST00000573095 MXD3Q9BW11 206 aa24.56■■□□□ 1.52
HCFC1R1-204ENST00000573095 GRM8O00222 908 aa24.55■■□□□ 1.52
HCFC1R1-204ENST00000573095 KCNJ4P48050 445 aa24.55■■□□□ 1.52
HCFC1R1-204ENST00000573095 OGFOD1Q8N543 542 aa24.55■■□□□ 1.52
HCFC1R1-204ENST00000573095 FBXW7Q969H0 707 aa24.55■■□□□ 1.52
HCFC1R1-204ENST00000573095 IRS2Q9Y4H2 1338 aa24.55■■□□□ 1.52
HCFC1R1-204ENST00000573095 FKBP1BP68106 108 aa24.54■■□□□ 1.52
HCFC1R1-204ENST00000573095 ECM29Q5VYK3 1845 aa24.54■■□□□ 1.52
HCFC1R1-204ENST00000573095 AKAP11Q9UKA4 1901 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 ALDH1L1O75891 902 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 SLC10A3P09131 477 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 ZNF157P51786 506 aaPredicted RBP24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 NBPF9Q3BBW0 867 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 TTLL5Q6EMB2 1281 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 C15orf52Q6ZUT6 534 aaKnown RBP24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 ABHD8Q96I13 439 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 CHMP3Q9Y3E7 222 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 CASP8AP2Q9UKL3 1982 aa24.53■■□□□ 1.52
HCFC1R1-204ENST00000573095 WNT10BO00744 389 aa24.52■■□□□ 1.52
HCFC1R1-204ENST00000573095 LMBR1LQ6UX01 489 aa24.52■■□□□ 1.52
HCFC1R1-204ENST00000573095 CD209Q9NNX6 404 aa24.52■■□□□ 1.52
HCFC1R1-204ENST00000573095 EPHA10Q5JZY3 1008 aa24.51■■□□□ 1.51
HCFC1R1-204ENST00000573095 TAF5LO75529 589 aa24.5■■□□□ 1.51
HCFC1R1-204ENST00000573095 GTF2IP78347 998 aa24.5■■□□□ 1.51
HCFC1R1-204ENST00000573095 SRCIN1Q9C0H9 1055 aa24.5■■□□□ 1.51
HCFC1R1-204ENST00000573095 SAGE1Q9NXZ1 904 aa24.5■■□□□ 1.51
HCFC1R1-204ENST00000573095 C9orf78Q9NZ63 289 aaPredicted RBP24.5■■□□□ 1.51
HCFC1R1-204ENST00000573095 KIF23Q02241 960 aaPredicted RBP24.49■■□□□ 1.51
HCFC1R1-204ENST00000573095 CCDC57Q2TAC2 916 aa24.49■■□□□ 1.51
HCFC1R1-204ENST00000573095 SLC4A10Q6U841 1118 aa24.49■■□□□ 1.51
HCFC1R1-204ENST00000573095 HDAC9Q9UKV0 1011 aa24.49■■□□□ 1.51
HCFC1R1-204ENST00000573095 SNAP23O00161 211 aa24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 SASH1O94885 1247 aa24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 RASAL3Q86YV0 1011 aa24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 KIAA0825Q8IV33 1275 aa24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 HELBQ8NG08 1087 aaPredicted RBP24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 ARAP2Q8WZ64 1704 aa24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 ZBED3Q96IU2 234 aaPredicted RBP24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 SCAF8Q9UPN6 1271 aaKnown RBP24.48■■□□□ 1.51
HCFC1R1-204ENST00000573095 COL1A1P02452 1464 aaPredicted RBP24.47■■□□□ 1.51
HCFC1R1-204ENST00000573095 TAF7LQ5H9L4 462 aa24.47■■□□□ 1.51
HCFC1R1-204ENST00000573095 ZNF804AQ7Z570 1209 aa24.47■■□□□ 1.51
HCFC1R1-204ENST00000573095 IL1R1P14778 569 aa24.46■■□□□ 1.51
HCFC1R1-204ENST00000573095 LDHAL6AQ6ZMR3 332 aa24.46■■□□□ 1.51
HCFC1R1-204ENST00000573095 APOBEC3FQ8IUX4 373 aaKnown RBP24.46■■□□□ 1.51
HCFC1R1-204ENST00000573095 ZNF594Q96JF6 807 aaPredicted RBP24.46■■□□□ 1.51
HCFC1R1-204ENST00000573095 UTYO14607 1347 aa24.45■■□□□ 1.5
HCFC1R1-204ENST00000573095 CERS5Q8N5B7 392 aa24.45■■□□□ 1.5
HCFC1R1-204ENST00000573095 FKBP1AP62942 108 aaKnown RBP24.44■■□□□ 1.5
HCFC1R1-204ENST00000573095 REM2Q8IYK8 340 aaPredicted RBP24.44■■□□□ 1.5
HCFC1R1-204ENST00000573095 SUCLG2Q96I99 432 aa24.44■■□□□ 1.5
HCFC1R1-204ENST00000573095 CNNM1Q9NRU3 951 aa24.44■■□□□ 1.5
HCFC1R1-204ENST00000573095 PTPRCP08575 1304 aa24.43■■□□□ 1.5
HCFC1R1-204ENST00000573095 E9PSI1 815 aa24.43■■□□□ 1.5
HCFC1R1-204ENST00000573095 NF2P35240 595 aa24.43■■□□□ 1.5
HCFC1R1-204ENST00000573095 PRAMEF18Q5VWM3 479 aa24.43■■□□□ 1.5
HCFC1R1-204ENST00000573095 MOB2Q70IA6 237 aa24.43■■□□□ 1.5
HCFC1R1-204ENST00000573095 MRPL50Q8N5N7 158 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms