RNA–Protein interactions for RNA: ENST00000573035.5

GTF2I-212, Transcript of general transcription factor IIi, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GTF2I, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-212ENST00000573035 RANBP6O60518 1105 aaKnown RBP16.63■□□□□ 0.25
GTF2I-212ENST00000573035 BRD1O95696 1058 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 LMOD1P29536 600 aaPredicted RBP16.63■□□□□ 0.25
GTF2I-212ENST00000573035 AK2P54819 239 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 CCDC121Q6ZUS5 278 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 IMPACTQ9P2X3 320 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 BLMP54132 1417 aaPredicted RBP16.63■□□□□ 0.25
GTF2I-212ENST00000573035 SPAG1Q07617 926 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 CCDC24Q8N4L8 307 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 DRC1Q96MC2 740 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
GTF2I-212ENST00000573035 USP21Q9UK80 565 aa16.63■□□□□ 0.25
GTF2I-212ENST00000573035 CCDC196A0A1B0GTZ2 297 aa16.62■□□□□ 0.25
GTF2I-212ENST00000573035 NEO1Q92859 1461 aa16.62■□□□□ 0.25
GTF2I-212ENST00000573035 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
GTF2I-212ENST00000573035 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
GTF2I-212ENST00000573035 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
GTF2I-212ENST00000573035 NSFL1CQ9UNZ2 370 aaKnown RBP16.62■□□□□ 0.25
GTF2I-212ENST00000573035 CCT2P78371 535 aaKnown RBP16.62■□□□□ 0.25
GTF2I-212ENST00000573035 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 ST5P78524 1137 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
GTF2I-212ENST00000573035 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 N4BP3O15049 544 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 PRM3Q9NNZ6 103 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
GTF2I-212ENST00000573035 ELP1O95163 1332 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 AFAP1L1Q8TED9 768 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 BMP2KQ9NSY1 1161 aaPredicted RBP16.61■□□□□ 0.25
GTF2I-212ENST00000573035 TRPM2O94759 1503 aa16.61■□□□□ 0.25
GTF2I-212ENST00000573035 OAS2P29728 719 aaKnown RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CYLC1P35663 651 aaPredicted RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 ZHX3Q9H4I2 956 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CBX8Q9HC52 389 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 TSPOAP1O95153 1857 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 HAND2P61296 217 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CACNA2D4Q7Z3S7 1137 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 RSRC1Q96IZ7 334 aaKnown RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 MAGI3Q5TCQ9 1506 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 TMEM132AQ24JP5 1023 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 BRF1Q92994 677 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CCDC114Q96M63 670 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CARD6Q9BX69 1037 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 GRM8O00222 908 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 FGFR1OPO95684 399 aaKnown RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 KRT18P05783 430 aaKnown RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 MAP2K2P36507 400 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 CCNL1Q9UK58 526 aaPredicted RBP16.6■□□□□ 0.25
GTF2I-212ENST00000573035 JAG2Q9Y219 1238 aa16.6■□□□□ 0.25
GTF2I-212ENST00000573035 INPP5BP32019 993 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 KSR2Q6VAB6 950 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 UTP14AQ9BVJ6 771 aaKnown RBP16.59■□□□□ 0.25
GTF2I-212ENST00000573035 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
GTF2I-212ENST00000573035 GOLGA8BA8MQT2 603 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 CHMLP26374 656 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 CLSTN2Q9H4D0 955 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.59■□□□□ 0.25
GTF2I-212ENST00000573035 RTL1A6NKG5 1358 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 CHMP4BP1P59074 171 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 GRM1Q13255 1194 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 FAM182BQ5T319 152 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 MSL1Q68DK7 614 aa16.59■□□□□ 0.25
GTF2I-212ENST00000573035 A1BGP04217 495 aa16.58■□□□□ 0.25
GTF2I-212ENST00000573035 USP16Q9Y5T5 823 aa16.58■□□□□ 0.25
GTF2I-212ENST00000573035 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.25
GTF2I-212ENST00000573035 SSR1P43307 286 aaKnown RBP16.58■□□□□ 0.25
GTF2I-212ENST00000573035 PUF60Q9UHX1 559 aaKnown RBP16.58■□□□□ 0.25
GTF2I-212ENST00000573035 ZNF215Q9UL58 517 aaPredicted RBP16.58■□□□□ 0.25
GTF2I-212ENST00000573035 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
GTF2I-212ENST00000573035 TPTE2Q6XPS3 522 aa16.58■□□□□ 0.24
GTF2I-212ENST00000573035 VPS36Q86VN1 386 aa16.58■□□□□ 0.24
GTF2I-212ENST00000573035 SSBP05455 408 aaKnown RBP eCLIP16.57■□□□□ 0.24
GTF2I-212ENST00000573035 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 PUS7Q96PZ0 661 aaKnown RBP16.57■□□□□ 0.24
GTF2I-212ENST00000573035 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
GTF2I-212ENST00000573035 RHOXF2BP0C7M4 288 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 CEP85Q6P2H3 762 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 RHOXF2Q9BQY4 288 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 CCDC178Q5BJE1 867 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 BAG1Q99933 345 aaPredicted RBP16.57■□□□□ 0.24
GTF2I-212ENST00000573035 GADD45BO75293 160 aaPredicted RBP16.57■□□□□ 0.24
GTF2I-212ENST00000573035 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 GPR161Q8N6U8 529 aaKnown RBP16.57■□□□□ 0.24
GTF2I-212ENST00000573035 ANKS4BQ8N8V4 417 aa16.57■□□□□ 0.24
GTF2I-212ENST00000573035 NSRP1Q9H0G5 558 aaKnown RBP16.57■□□□□ 0.24
GTF2I-212ENST00000573035 SARNPP82979 210 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms