RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 CDC25BP30305 580 aa8.61□□□□□ -1.03
TOM1L1-215ENST00000572905 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
TOM1L1-215ENST00000572905 RASSF4Q9H2L5 321 aa8.61□□□□□ -1.03
TOM1L1-215ENST00000572905 AKTIPQ9H8T0 292 aa8.61□□□□□ -1.03
TOM1L1-215ENST00000572905 TMEM63CQ9P1W3 806 aa8.61□□□□□ -1.03
TOM1L1-215ENST00000572905 PPME1Q9Y570 386 aa8.61□□□□□ -1.03
TOM1L1-215ENST00000572905 LINC01387J3KSC0 135 aa8.6□□□□□ -1.03
TOM1L1-215ENST00000572905 SMNDC1O75940 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
TOM1L1-215ENST00000572905 MTMR3Q13615 1198 aa8.6□□□□□ -1.03
TOM1L1-215ENST00000572905 ZNF438Q7Z4V0 828 aa8.6□□□□□ -1.03
TOM1L1-215ENST00000572905 ELP3Q9H9T3 547 aa8.6□□□□□ -1.03
TOM1L1-215ENST00000572905 KANSL3Q9P2N6 904 aa8.6□□□□□ -1.03
TOM1L1-215ENST00000572905 MAPK1P28482 360 aa8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 DNM1Q05193 864 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 ADAMTSL4Q6UY14 1074 aa8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 NCAPG2Q86XI2 1143 aa8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 AGGF1Q8N302 714 aaeCLIP8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 EDEM1Q92611 657 aa8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 SRA1Q9HD15 236 aaKnown RBP8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
TOM1L1-215ENST00000572905 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
TOM1L1-215ENST00000572905 NPR3P17342 541 aa8.58□□□□□ -1.04
TOM1L1-215ENST00000572905 ARHGAP4P98171 946 aa8.58□□□□□ -1.04
TOM1L1-215ENST00000572905 MAP4K3Q8IVH8 894 aa8.58□□□□□ -1.04
TOM1L1-215ENST00000572905 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
TOM1L1-215ENST00000572905 MUC3BQ9H195 1237 aa8.58□□□□□ -1.04
TOM1L1-215ENST00000572905 RBM47A0AV96 593 aaKnown RBP8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 A6NHS1 94 aa8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 KIF4AO95239 1232 aa8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 ZSCAN29Q8IWY8 852 aaPredicted RBP8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 CACTIN-AS1Q8N1I8 211 aa8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 GALNT11Q8NCW6 608 aa8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 CNTN3Q9P232 1028 aa8.57□□□□□ -1.04
TOM1L1-215ENST00000572905 ANKRD33BA6NCL7 494 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 E9PSI1 815 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 GLB1P16278 677 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 MPSTP25325 297 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 CDC27P30260 824 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 ECM1Q16610 540 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 C8orf34Q49A92 452 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 ARTNQ5T4W7 220 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 DCAF11Q8TEB1 546 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 ASB16Q96NS5 453 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 PBX4Q9BYU1 374 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 ZFP64Q9NPA5 681 aa8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.56□□□□□ -1.04
TOM1L1-215ENST00000572905 ACPPP15309 386 aa8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 NOM1Q5C9Z4 860 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 ALKBH2Q6NS38 261 aa8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 PRR23CQ6ZRP0 262 aa8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 DZIP1LQ8IYY4 767 aaKnown RBP8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 TMEM130Q8N3G9 435 aa8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 CEP120Q8N960 986 aa8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 C1orf127Q8N9H9 656 aa8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
TOM1L1-215ENST00000572905 NDUFB5O43674 189 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 WISP1O95388 367 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 PDGFAP04085 211 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 PCSK2P16519 638 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 EPHA1P21709 976 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 EIF1AXP47813 144 aaKnown RBP8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 NPAS4Q8IUM7 802 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 TTC16Q8NEE8 873 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 BCL2L13Q9BXK5 485 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 GGNBP2Q9H3C7 697 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 KCNK4Q9NYG8 393 aa8.54□□□□□ -1.04
TOM1L1-215ENST00000572905 FAM177BA6PVY3 158 aa8.53□□□□□ -1.04
TOM1L1-215ENST00000572905 RPLP1P05386 114 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-215ENST00000572905 CES1P23141 567 aa8.53□□□□□ -1.04
TOM1L1-215ENST00000572905 CD68P34810 354 aaPredicted RBP8.53□□□□□ -1.04
TOM1L1-215ENST00000572905 ACAD11Q709F0 780 aa8.53□□□□□ -1.04
TOM1L1-215ENST00000572905 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-215ENST00000572905 POP1Q99575 1024 aaKnown RBP8.53□□□□□ -1.04
TOM1L1-215ENST00000572905 FSCN2O14926 492 aa8.52□□□□□ -1.05
TOM1L1-215ENST00000572905 TRPA1O75762 1119 aa8.52□□□□□ -1.05
TOM1L1-215ENST00000572905 PTPRAP18433 802 aa8.52□□□□□ -1.05
TOM1L1-215ENST00000572905 AAMPQ13685 434 aa8.52□□□□□ -1.05
TOM1L1-215ENST00000572905 FAM117BQ6P1L5 589 aa8.52□□□□□ -1.05
TOM1L1-215ENST00000572905 BRPF3Q9ULD4 1205 aa8.52□□□□□ -1.05
TOM1L1-215ENST00000572905 MZF1P28698 734 aaPredicted RBP8.51□□□□□ -1.05
TOM1L1-215ENST00000572905 LRP8Q14114 963 aa8.51□□□□□ -1.05
TOM1L1-215ENST00000572905 NBPF11Q86T75 865 aa8.51□□□□□ -1.05
TOM1L1-215ENST00000572905 CITED4Q96RK1 184 aa8.51□□□□□ -1.05
TOM1L1-215ENST00000572905 RBCK1Q9BYM8 510 aa8.51□□□□□ -1.05
TOM1L1-215ENST00000572905 SALL4Q9UJQ4 1053 aa8.51□□□□□ -1.05
TOM1L1-215ENST00000572905 POLIQ9UNA4 740 aa8.51□□□□□ -1.05
TOM1L1-215ENST00000572905 DDX3YO15523 660 aaKnown RBP8.5□□□□□ -1.05
TOM1L1-215ENST00000572905 COL19A1Q14993 1142 aa8.5□□□□□ -1.05
TOM1L1-215ENST00000572905 XKR5Q6UX68 686 aa8.5□□□□□ -1.05
TOM1L1-215ENST00000572905 Q6ZS46 218 aa8.5□□□□□ -1.05
TOM1L1-215ENST00000572905 GIPC2Q8TF65 315 aa8.5□□□□□ -1.05
TOM1L1-215ENST00000572905 ZNF16P17020 682 aaPredicted RBP8.49□□□□□ -1.05
TOM1L1-215ENST00000572905 FSTP19883 344 aa8.49□□□□□ -1.05
TOM1L1-215ENST00000572905 DUOXA2Q1HG44 320 aa8.49□□□□□ -1.05
TOM1L1-215ENST00000572905 ZNF326Q5BKZ1 582 aaKnown RBP8.49□□□□□ -1.05
TOM1L1-215ENST00000572905 UBASH3BQ8TF42 649 aa8.49□□□□□ -1.05
TOM1L1-215ENST00000572905 HHIPQ96QV1 700 aa8.49□□□□□ -1.05
TOM1L1-215ENST00000572905 UBL7Q96S82 380 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms