RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 USP17L1Q7RTZ2 530 aa25.84■■□□□ 1.73
CHMP6-204ENST00000572778 MICALL2Q8IY33 904 aa25.84■■□□□ 1.73
CHMP6-204ENST00000572778 DZIP1LQ8IYY4 767 aaKnown RBP25.84■■□□□ 1.73
CHMP6-204ENST00000572778 DPF2Q92785 391 aa25.84■■□□□ 1.73
CHMP6-204ENST00000572778 MROH5Q6ZUA9 1318 aa25.84■■□□□ 1.73
CHMP6-204ENST00000572778 SHTN1A0MZ66 631 aa25.83■■□□□ 1.73
CHMP6-204ENST00000572778 RPS12P25398 132 aaKnown RBP25.83■■□□□ 1.73
CHMP6-204ENST00000572778 RFX5P48382 616 aaPredicted RBP25.83■■□□□ 1.73
CHMP6-204ENST00000572778 METTL24Q5JXM2 366 aa25.83■■□□□ 1.73
CHMP6-204ENST00000572778 FBXW7Q969H0 707 aa25.83■■□□□ 1.73
CHMP6-204ENST00000572778 APLP1P51693 650 aa25.82■■□□□ 1.72
CHMP6-204ENST00000572778 RSBN1LQ6PCB5 846 aaPredicted RBP25.82■■□□□ 1.72
CHMP6-204ENST00000572778 PTPN12Q05209 780 aaKnown RBP25.81■■□□□ 1.72
CHMP6-204ENST00000572778 MAP1SQ66K74 1059 aaPredicted RBP25.81■■□□□ 1.72
CHMP6-204ENST00000572778 C15orf52Q6ZUT6 534 aaKnown RBP25.81■■□□□ 1.72
CHMP6-204ENST00000572778 RCAN3Q9UKA8 241 aa25.81■■□□□ 1.72
CHMP6-204ENST00000572778 GNAI2P04899 355 aa25.8■■□□□ 1.72
CHMP6-204ENST00000572778 UBE4AQ14139 1066 aa25.8■■□□□ 1.72
CHMP6-204ENST00000572778 ZNF804AQ7Z570 1209 aa25.8■■□□□ 1.72
CHMP6-204ENST00000572778 ITPRIPQ8IWB1 547 aa25.8■■□□□ 1.72
CHMP6-204ENST00000572778 YTHDC1Q96MU7 727 aaKnown RBP25.8■■□□□ 1.72
CHMP6-204ENST00000572778 CD209Q9NNX6 404 aa25.8■■□□□ 1.72
CHMP6-204ENST00000572778 IRS2Q9Y4H2 1338 aa25.8■■□□□ 1.72
CHMP6-204ENST00000572778 EYA2O00167 538 aa25.79■■□□□ 1.72
CHMP6-204ENST00000572778 RLBP1P12271 317 aa25.79■■□□□ 1.72
CHMP6-204ENST00000572778 CNTROBQ8N137 903 aa25.79■■□□□ 1.72
CHMP6-204ENST00000572778 AGBL3Q8NEM8 1001 aa25.79■■□□□ 1.72
CHMP6-204ENST00000572778 TRPM4Q8TD43 1214 aa25.79■■□□□ 1.72
CHMP6-204ENST00000572778 SIL1Q9H173 461 aa25.79■■□□□ 1.72
CHMP6-204ENST00000572778 RBM26Q5T8P6 1007 aaKnown RBP25.78■■□□□ 1.72
CHMP6-204ENST00000572778 SAMD7Q7Z3H4 446 aa25.78■■□□□ 1.72
CHMP6-204ENST00000572778 PDE8BO95263 885 aa25.77■■□□□ 1.72
CHMP6-204ENST00000572778 TBC1D10BQ4KMP7 808 aaPredicted RBP25.77■■□□□ 1.72
CHMP6-204ENST00000572778 STRIP1Q5VSL9 837 aa25.77■■□□□ 1.72
CHMP6-204ENST00000572778 TTLL5Q6EMB2 1281 aa25.77■■□□□ 1.72
CHMP6-204ENST00000572778 MXD3Q9BW11 206 aa25.77■■□□□ 1.72
CHMP6-204ENST00000572778 PA2G4Q9UQ80 394 aaKnown RBP25.77■■□□□ 1.72
CHMP6-204ENST00000572778 SRGAP3O43295 1099 aa25.76■■□□□ 1.71
CHMP6-204ENST00000572778 HIRAP54198 1017 aaPredicted RBP25.76■■□□□ 1.71
CHMP6-204ENST00000572778 GTF2IP78347 998 aa25.76■■□□□ 1.71
CHMP6-204ENST00000572778 HTRA3P83110 453 aa25.76■■□□□ 1.71
CHMP6-204ENST00000572778 DACT2Q5SW24 774 aa25.76■■□□□ 1.71
CHMP6-204ENST00000572778 PANK1Q8TE04 598 aa25.76■■□□□ 1.71
CHMP6-204ENST00000572778 SCN9AQ15858 1988 aa25.75■■□□□ 1.71
CHMP6-204ENST00000572778 ITGBL1O95965 494 aaPredicted RBP25.75■■□□□ 1.71
CHMP6-204ENST00000572778 GYG1P46976 350 aa25.75■■□□□ 1.71
CHMP6-204ENST00000572778 VGLL2Q8N8G2 317 aa25.75■■□□□ 1.71
CHMP6-204ENST00000572778 FBXO3Q9UK99 471 aa25.75■■□□□ 1.71
CHMP6-204ENST00000572778 MS4A1P11836 297 aa25.74■■□□□ 1.71
CHMP6-204ENST00000572778 ATG9AQ7Z3C6 839 aa25.74■■□□□ 1.71
CHMP6-204ENST00000572778 GMLQ99445 158 aa25.74■■□□□ 1.71
CHMP6-204ENST00000572778 CIAO1O76071 339 aa25.73■■□□□ 1.71
CHMP6-204ENST00000572778 USP17L8P0C7I0 530 aa25.73■■□□□ 1.71
CHMP6-204ENST00000572778 IL1R1P14778 569 aa25.73■■□□□ 1.71
CHMP6-204ENST00000572778 HIBADHP31937 336 aaKnown RBP25.73■■□□□ 1.71
CHMP6-204ENST00000572778 MTX1Q13505 466 aa25.73■■□□□ 1.71
CHMP6-204ENST00000572778 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
CHMP6-204ENST00000572778 COPRSQ9NQ92 184 aa25.73■■□□□ 1.71
CHMP6-204ENST00000572778 ADAMTSL1Q8N6G6 1762 aa25.73■■□□□ 1.71
CHMP6-204ENST00000572778 MYO3BQ8WXR4 1341 aa25.72■■□□□ 1.71
CHMP6-204ENST00000572778 PASKQ96RG2 1323 aa25.72■■□□□ 1.71
CHMP6-204ENST00000572778 EGFRP00533 1210 aa25.72■■□□□ 1.71
CHMP6-204ENST00000572778 PUM3Q15397 648 aaKnown RBP25.72■■□□□ 1.71
CHMP6-204ENST00000572778 KIF4BQ2VIQ3 1234 aa25.72■■□□□ 1.71
CHMP6-204ENST00000572778 VPS37DQ86XT2 251 aa25.72■■□□□ 1.71
CHMP6-204ENST00000572778 ZC3H15Q8WU90 426 aaKnown RBP25.72■■□□□ 1.71
CHMP6-204ENST00000572778 CEP126Q9P2H0 1117 aa25.72■■□□□ 1.71
CHMP6-204ENST00000572778 A0A1B0GUL6 1792 aa25.72■■□□□ 1.71
CHMP6-204ENST00000572778 ZBTB7BO15156 539 aaPredicted RBP25.71■■□□□ 1.71
CHMP6-204ENST00000572778 IFIT1P09914 478 aaKnown RBP25.71■■□□□ 1.71
CHMP6-204ENST00000572778 IL15P40933 162 aaPredicted RBP25.71■■□□□ 1.71
CHMP6-204ENST00000572778 ZNF280AP59817 542 aaPredicted RBP25.71■■□□□ 1.71
CHMP6-204ENST00000572778 CAVIN4Q5BKX8 364 aa25.71■■□□□ 1.71
CHMP6-204ENST00000572778 C1orf115Q9H7X2 142 aa25.71■■□□□ 1.71
CHMP6-204ENST00000572778 ZNF609O15014 1411 aa25.71■■□□□ 1.71
CHMP6-204ENST00000572778 OGFOD1Q8N543 542 aa25.7■■□□□ 1.7
CHMP6-204ENST00000572778 PGAP2Q9UHJ9 254 aa25.7■■□□□ 1.7
CHMP6-204ENST00000572778 JAG2Q9Y219 1238 aa25.7■■□□□ 1.7
CHMP6-204ENST00000572778 PNMA6EA0A0J9YXQ4 647 aa25.69■■□□□ 1.7
CHMP6-204ENST00000572778 FGFR2P21802 821 aa25.69■■□□□ 1.7
CHMP6-204ENST00000572778 FBXO33Q7Z6M2 555 aa25.69■■□□□ 1.7
CHMP6-204ENST00000572778 KIAA0825Q8IV33 1275 aa25.69■■□□□ 1.7
CHMP6-204ENST00000572778 TDRD7Q8NHU6 1098 aaKnown RBP25.69■■□□□ 1.7
CHMP6-204ENST00000572778 LPIN2Q92539 896 aa25.69■■□□□ 1.7
CHMP6-204ENST00000572778 MYOZ2Q9NPC6 264 aa25.69■■□□□ 1.7
CHMP6-204ENST00000572778 SASH1O94885 1247 aa25.68■■□□□ 1.7
CHMP6-204ENST00000572778 SLC5A1P13866 664 aa25.68■■□□□ 1.7
CHMP6-204ENST00000572778 GLIS2Q9BZE0 524 aaPredicted RBP25.68■■□□□ 1.7
CHMP6-204ENST00000572778 TRAF5O00463 557 aa25.67■■□□□ 1.7
CHMP6-204ENST00000572778 FMR1Q06787 632 aaKnown RBP eCLIP25.67■■□□□ 1.7
CHMP6-204ENST00000572778 IQSEC3Q9UPP2 1182 aaPredicted RBP25.67■■□□□ 1.7
CHMP6-204ENST00000572778 FRAT2O75474 233 aaPredicted RBP25.66■■□□□ 1.7
CHMP6-204ENST00000572778 BCAMP50895 628 aa25.66■■□□□ 1.7
CHMP6-204ENST00000572778 SCARF1Q14162 830 aa25.66■■□□□ 1.7
CHMP6-204ENST00000572778 ATP2B3Q16720 1220 aa25.66■■□□□ 1.7
CHMP6-204ENST00000572778 CERS5Q8N5B7 392 aa25.66■■□□□ 1.7
CHMP6-204ENST00000572778 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.66■■□□□ 1.7
CHMP6-204ENST00000572778 DCPSQ96C86 337 aaKnown RBP25.66■■□□□ 1.7
CHMP6-204ENST00000572778 CREBZFQ9NS37 354 aa25.66■■□□□ 1.7
CHMP6-204ENST00000572778 HDAC9Q9UKV0 1011 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms