RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 ECE1P42892 770 aa23.08■■□□□ 1.29
CHD3-214ENST00000572579 MAP2K1Q02750 393 aaPredicted RBP23.08■■□□□ 1.29
CHD3-214ENST00000572579 SCARF1Q14162 830 aa23.08■■□□□ 1.29
CHD3-214ENST00000572579 AIDAQ96BJ3 306 aa23.08■■□□□ 1.29
CHD3-214ENST00000572579 HHIPL1Q96JK4 782 aa23.08■■□□□ 1.29
CHD3-214ENST00000572579 CHRNDQ07001 517 aa23.07■■□□□ 1.28
CHD3-214ENST00000572579 GGA3Q9NZ52 723 aa23.07■■□□□ 1.28
CHD3-214ENST00000572579 SCAF8Q9UPN6 1271 aaKnown RBP23.07■■□□□ 1.28
CHD3-214ENST00000572579 LEMD3Q9Y2U8 911 aa23.07■■□□□ 1.28
CHD3-214ENST00000572579 ZNF804BA4D1E1 1349 aa23.07■■□□□ 1.28
CHD3-214ENST00000572579 USP17L8P0C7I0 530 aa23.06■■□□□ 1.28
CHD3-214ENST00000572579 DCPSQ96C86 337 aaKnown RBP23.06■■□□□ 1.28
CHD3-214ENST00000572579 KAZALD1Q96I82 304 aa23.06■■□□□ 1.28
CHD3-214ENST00000572579 TRPM7Q96QT4 1865 aa23.06■■□□□ 1.28
CHD3-214ENST00000572579 MAP2K2P36507 400 aa23.05■■□□□ 1.28
CHD3-214ENST00000572579 ANGEL2Q5VTE6 544 aaKnown RBP23.05■■□□□ 1.28
CHD3-214ENST00000572579 HELBQ8NG08 1087 aaPredicted RBP23.05■■□□□ 1.28
CHD3-214ENST00000572579 COA1Q9GZY4 146 aa23.05■■□□□ 1.28
CHD3-214ENST00000572579 MYOZ2Q9NPC6 264 aa23.05■■□□□ 1.28
CHD3-214ENST00000572579 GRM8O00222 908 aa23.04■■□□□ 1.28
CHD3-214ENST00000572579 TAF5LO75529 589 aa23.04■■□□□ 1.28
CHD3-214ENST00000572579 LMBR1LQ6UX01 489 aa23.04■■□□□ 1.28
CHD3-214ENST00000572579 ZNF594Q96JF6 807 aaPredicted RBP23.04■■□□□ 1.28
CHD3-214ENST00000572579 MPHOSPH8Q99549 860 aa23.04■■□□□ 1.28
CHD3-214ENST00000572579 ANKRD18BA2A2Z9 1011 aa23.03■■□□□ 1.28
CHD3-214ENST00000572579 FAM155AB1AL88 458 aaPredicted RBP23.03■■□□□ 1.28
CHD3-214ENST00000572579 HUNKP57058 714 aa23.03■■□□□ 1.28
CHD3-214ENST00000572579 MRPL50Q8N5N7 158 aaKnown RBP23.03■■□□□ 1.28
CHD3-214ENST00000572579 ANKRD2Q9GZV1 360 aa23.03■■□□□ 1.28
CHD3-214ENST00000572579 TSKSQ9UJT2 592 aa23.03■■□□□ 1.28
CHD3-214ENST00000572579 THSD7BQ9C0I4 1608 aa23.03■■□□□ 1.28
CHD3-214ENST00000572579 NBPF9Q3BBW0 867 aa23.02■■□□□ 1.28
CHD3-214ENST00000572579 STRIP1Q5VSL9 837 aa23.02■■□□□ 1.28
CHD3-214ENST00000572579 CDCA5Q96FF9 252 aa23.02■■□□□ 1.28
CHD3-214ENST00000572579 GBA2Q9HCG7 927 aaPredicted RBP23.02■■□□□ 1.28
CHD3-214ENST00000572579 IFIT5Q13325 482 aaKnown RBP23.01■■□□□ 1.27
CHD3-214ENST00000572579 SLC4A10Q6U841 1118 aa23.01■■□□□ 1.27
CHD3-214ENST00000572579 POLR2AP24928 1970 aaKnown RBP23■■□□□ 1.27
CHD3-214ENST00000572579 ALDH1L1O75891 902 aa23■■□□□ 1.27
CHD3-214ENST00000572579 NBPF7P0C2Y1 421 aaPredicted RBP23■■□□□ 1.27
CHD3-214ENST00000572579 SULF1Q8IWU6 871 aa23■■□□□ 1.27
CHD3-214ENST00000572579 CDCA7LQ96GN5 454 aa23■■□□□ 1.27
CHD3-214ENST00000572579 SUCLG2Q96I99 432 aa23■■□□□ 1.27
CHD3-214ENST00000572579 CD209Q9NNX6 404 aa23■■□□□ 1.27
CHD3-214ENST00000572579 MYH3P11055 1940 aa23■■□□□ 1.27
CHD3-214ENST00000572579 SLFN5Q08AF3 891 aa22.99■■□□□ 1.27
CHD3-214ENST00000572579 PRAMEF18Q5VWM3 479 aa22.99■■□□□ 1.27
CHD3-214ENST00000572579 TTLL5Q6EMB2 1281 aa22.99■■□□□ 1.27
CHD3-214ENST00000572579 C15orf52Q6ZUT6 534 aaKnown RBP22.99■■□□□ 1.27
CHD3-214ENST00000572579 CHMP3Q9Y3E7 222 aa22.99■■□□□ 1.27
CHD3-214ENST00000572579 WNT10BO00744 389 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 GTF2IP78347 998 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 RGMBQ6NW40 437 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 CERS5Q8N5B7 392 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 SSH1Q8WYL5 1049 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 FBXW7Q969H0 707 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 SRCIN1Q9C0H9 1055 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 SPEF2Q9C093 1822 aa22.98■■□□□ 1.27
CHD3-214ENST00000572579 MOB2Q70IA6 237 aa22.97■■□□□ 1.27
CHD3-214ENST00000572579 C2orf69Q8N8R5 385 aa22.97■■□□□ 1.27
CHD3-214ENST00000572579 ZBED3Q96IU2 234 aaPredicted RBP22.97■■□□□ 1.27
CHD3-214ENST00000572579 PUS3Q9BZE2 481 aaKnown RBP22.97■■□□□ 1.27
CHD3-214ENST00000572579 C9orf78Q9NZ63 289 aaPredicted RBP22.97■■□□□ 1.27
CHD3-214ENST00000572579 CACNA1FO60840 1977 aa22.97■■□□□ 1.27
CHD3-214ENST00000572579 UTYO14607 1347 aa22.97■■□□□ 1.27
CHD3-214ENST00000572579 BRPF1P55201 1214 aaPredicted RBP22.96■■□□□ 1.27
CHD3-214ENST00000572579 ZNF646O15015 1829 aaPredicted RBP22.96■■□□□ 1.27
CHD3-214ENST00000572579 PSME4Q14997 1843 aa22.96■■□□□ 1.27
CHD3-214ENST00000572579 E9PSI1 815 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 KCNJ4P48050 445 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 NOGQ13253 232 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 CCDC57Q2TAC2 916 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 LDHAL6AQ6ZMR3 332 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 KIAA0825Q8IV33 1275 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 PITPNM2Q9BZ72 1349 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 PCDHAC2Q9Y5I4 1007 aa22.95■■□□□ 1.26
CHD3-214ENST00000572579 SASH1O94885 1247 aa22.94■■□□□ 1.26
CHD3-214ENST00000572579 TRMT2AQ8IZ69 625 aaKnown RBP22.94■■□□□ 1.26
CHD3-214ENST00000572579 ANKRD44Q8N8A2 993 aa22.94■■□□□ 1.26
CHD3-214ENST00000572579 PLIN1O60240 522 aa22.93■■□□□ 1.26
CHD3-214ENST00000572579 IL1R1P14778 569 aa22.93■■□□□ 1.26
CHD3-214ENST00000572579 ZNF157P51786 506 aaPredicted RBP22.93■■□□□ 1.26
CHD3-214ENST00000572579 BEGAINQ9BUH8 593 aa22.93■■□□□ 1.26
CHD3-214ENST00000572579 MYO3BQ8WXR4 1341 aa22.92■■□□□ 1.26
CHD3-214ENST00000572579 KIF23Q02241 960 aaPredicted RBP22.92■■□□□ 1.26
CHD3-214ENST00000572579 RABL6Q3YEC7 729 aaPredicted RBP22.92■■□□□ 1.26
CHD3-214ENST00000572579 OGFOD1Q8N543 542 aa22.92■■□□□ 1.26
CHD3-214ENST00000572579 BICC1Q9H694 974 aaKnown RBP22.92■■□□□ 1.26
CHD3-214ENST00000572579 JAG2Q9Y219 1238 aa22.92■■□□□ 1.26
CHD3-214ENST00000572579 RIPOR2Q9Y4F9 1068 aa22.92■■□□□ 1.26
CHD3-214ENST00000572579 AOX1Q06278 1338 aa22.91■■□□□ 1.26
CHD3-214ENST00000572579 SLC10A3P09131 477 aa22.91■■□□□ 1.26
CHD3-214ENST00000572579 USP44Q9H0E7 712 aa22.91■■□□□ 1.26
CHD3-214ENST00000572579 CCDC102AQ96A19 550 aa22.9■■□□□ 1.26
CHD3-214ENST00000572579 CNNM1Q9NRU3 951 aa22.9■■□□□ 1.26
CHD3-214ENST00000572579 UBE2Q2LH0YL09 131 aa22.89■■□□□ 1.25
CHD3-214ENST00000572579 CSRNP1Q96S65 589 aa22.89■■□□□ 1.25
CHD3-214ENST00000572579 CA12O43570 354 aa22.88■■□□□ 1.25
CHD3-214ENST00000572579 LRRC24Q50LG9 513 aa22.88■■□□□ 1.25
CHD3-214ENST00000572579 TAF7LQ5H9L4 462 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms