RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 CDC5LQ99459 802 aaKnown RBP25.65■■□□□ 1.7
CCDC40-206ENST00000572083 METTL22Q9BUU2 404 aaPredicted RBP25.65■■□□□ 1.7
CCDC40-206ENST00000572083 DACT2Q5SW24 774 aa25.64■■□□□ 1.7
CCDC40-206ENST00000572083 WNT10BO00744 389 aa25.63■■□□□ 1.69
CCDC40-206ENST00000572083 SASH1O94885 1247 aa25.63■■□□□ 1.69
CCDC40-206ENST00000572083 OGFOD1Q8N543 542 aa25.63■■□□□ 1.69
CCDC40-206ENST00000572083 IFT57Q9NWB7 429 aa25.63■■□□□ 1.69
CCDC40-206ENST00000572083 GPR25O00155 361 aa25.62■■□□□ 1.69
CCDC40-206ENST00000572083 DDX58O95786 925 aaKnown RBP25.62■■□□□ 1.69
CCDC40-206ENST00000572083 GREM2Q9H772 168 aa25.62■■□□□ 1.69
CCDC40-206ENST00000572083 MINPP1Q9UNW1 487 aa25.62■■□□□ 1.69
CCDC40-206ENST00000572083 MAP3K2Q9Y2U5 619 aa25.62■■□□□ 1.69
CCDC40-206ENST00000572083 MYH3P11055 1940 aa25.62■■□□□ 1.69
CCDC40-206ENST00000572083 HTTP42858 3142 aa25.61■■□□□ 1.69
CCDC40-206ENST00000572083 NF2P35240 595 aa25.61■■□□□ 1.69
CCDC40-206ENST00000572083 TM4SF4P48230 202 aa25.61■■□□□ 1.69
CCDC40-206ENST00000572083 PRKG1Q13976 671 aa25.61■■□□□ 1.69
CCDC40-206ENST00000572083 C8orf58Q8NAV2 365 aa25.61■■□□□ 1.69
CCDC40-206ENST00000572083 BSDC1Q9NW68 430 aaPredicted RBP25.61■■□□□ 1.69
CCDC40-206ENST00000572083 CCT4P50991 539 aaKnown RBP25.6■■□□□ 1.69
CCDC40-206ENST00000572083 GNAI1P63096 354 aa25.6■■□□□ 1.69
CCDC40-206ENST00000572083 DDX10Q13206 875 aaKnown RBP25.6■■□□□ 1.69
CCDC40-206ENST00000572083 TTLL11Q8NHH1 800 aa25.6■■□□□ 1.69
CCDC40-206ENST00000572083 MYO3BQ8WXR4 1341 aa25.6■■□□□ 1.69
CCDC40-206ENST00000572083 SREBF2Q12772 1141 aa25.59■■□□□ 1.69
CCDC40-206ENST00000572083 STRIP1Q5VSL9 837 aa25.59■■□□□ 1.69
CCDC40-206ENST00000572083 MKI67P46013 3256 aaKnown RBP25.58■■□□□ 1.69
CCDC40-206ENST00000572083 IGKV5-2P06315 115 aa25.58■■□□□ 1.69
CCDC40-206ENST00000572083 PTPN12Q05209 780 aaKnown RBP25.58■■□□□ 1.69
CCDC40-206ENST00000572083 FBXO46Q6PJ61 603 aaPredicted RBP25.58■■□□□ 1.69
CCDC40-206ENST00000572083 TXNRD3Q86VQ6 643 aa25.58■■□□□ 1.69
CCDC40-206ENST00000572083 R3HDMLQ9H3Y0 253 aa25.58■■□□□ 1.69
CCDC40-206ENST00000572083 CENPFP49454 3210 aa25.57■■□□□ 1.68
CCDC40-206ENST00000572083 APAF1O14727 1248 aa25.57■■□□□ 1.68
CCDC40-206ENST00000572083 CCDC30Q5VVM6 783 aa25.57■■□□□ 1.68
CCDC40-206ENST00000572083 COA1Q9GZY4 146 aa25.57■■□□□ 1.68
CCDC40-206ENST00000572083 FKTNO75072 461 aa25.56■■□□□ 1.68
CCDC40-206ENST00000572083 NOM1Q5C9Z4 860 aaKnown RBP25.56■■□□□ 1.68
CCDC40-206ENST00000572083 ARMC9Q7Z3E5 817 aa25.56■■□□□ 1.68
CCDC40-206ENST00000572083 KIAA0825Q8IV33 1275 aa25.56■■□□□ 1.68
CCDC40-206ENST00000572083 FZD1Q9UP38 647 aa25.56■■□□□ 1.68
CCDC40-206ENST00000572083 PI4KAP2A4QPH2 592 aa25.55■■□□□ 1.68
CCDC40-206ENST00000572083 KLRK1P26718 216 aa25.55■■□□□ 1.68
CCDC40-206ENST00000572083 CALD1Q05682 793 aaKnown RBP25.55■■□□□ 1.68
CCDC40-206ENST00000572083 CWF19L2Q2TBE0 894 aaKnown RBP25.55■■□□□ 1.68
CCDC40-206ENST00000572083 APOBEC3FQ8IUX4 373 aaKnown RBP25.55■■□□□ 1.68
CCDC40-206ENST00000572083 PI4KAP1Q8N8J0 262 aa25.55■■□□□ 1.68
CCDC40-206ENST00000572083 KSR2Q6VAB6 950 aa25.54■■□□□ 1.68
CCDC40-206ENST00000572083 TSPYL6Q8N831 410 aa25.54■■□□□ 1.68
CCDC40-206ENST00000572083 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.54■■□□□ 1.68
CCDC40-206ENST00000572083 TTLL5Q6EMB2 1281 aa25.53■■□□□ 1.68
CCDC40-206ENST00000572083 CFHR5Q9BXR6 569 aa25.53■■□□□ 1.68
CCDC40-206ENST00000572083 ANGEL1Q9UNK9 670 aaKnown RBP25.53■■□□□ 1.68
CCDC40-206ENST00000572083 LEMD3Q9Y2U8 911 aa25.53■■□□□ 1.68
CCDC40-206ENST00000572083 BRCA2P51587 3418 aa25.53■■□□□ 1.68
CCDC40-206ENST00000572083 IGHMBP2P38935 993 aaKnown RBP25.52■■□□□ 1.68
CCDC40-206ENST00000572083 NEXNQ0ZGT2 675 aa25.52■■□□□ 1.68
CCDC40-206ENST00000572083 SPRYD7Q5W111 196 aa25.52■■□□□ 1.68
CCDC40-206ENST00000572083 UBE3BQ7Z3V4 1068 aa25.52■■□□□ 1.68
CCDC40-206ENST00000572083 NEURL1BA8MQ27 555 aa25.51■■□□□ 1.67
CCDC40-206ENST00000572083 GTF2IP78347 998 aa25.51■■□□□ 1.67
CCDC40-206ENST00000572083 LDLRAD1Q5T700 205 aa25.51■■□□□ 1.67
CCDC40-206ENST00000572083 ZNF804BA4D1E1 1349 aa25.51■■□□□ 1.67
CCDC40-206ENST00000572083 ZBED3Q96IU2 234 aaPredicted RBP25.5■■□□□ 1.67
CCDC40-206ENST00000572083 COL1A1P02452 1464 aaPredicted RBP25.49■■□□□ 1.67
CCDC40-206ENST00000572083 ITGA6P23229 1130 aa25.49■■□□□ 1.67
CCDC40-206ENST00000572083 SSC5DA1L4H1 1573 aa25.48■■□□□ 1.67
CCDC40-206ENST00000572083 MMP14P50281 582 aa25.48■■□□□ 1.67
CCDC40-206ENST00000572083 CHMP4AQ9BY43 222 aa25.48■■□□□ 1.67
CCDC40-206ENST00000572083 ALDH1A1P00352 501 aa25.47■■□□□ 1.67
CCDC40-206ENST00000572083 KCNJ4P48050 445 aa25.47■■□□□ 1.67
CCDC40-206ENST00000572083 TSR2Q969E8 191 aaKnown RBP25.47■■□□□ 1.67
CCDC40-206ENST00000572083 CLMNQ96JQ2 1002 aa25.47■■□□□ 1.67
CCDC40-206ENST00000572083 STK31Q9BXU1 1019 aa25.47■■□□□ 1.67
CCDC40-206ENST00000572083 ANKRD2Q9GZV1 360 aa25.47■■□□□ 1.67
CCDC40-206ENST00000572083 DEFB129Q9H1M3 183 aa25.47■■□□□ 1.67
CCDC40-206ENST00000572083 TRIM17Q9Y577 477 aa25.47■■□□□ 1.67
CCDC40-206ENST00000572083 H7C1W4 665 aa25.46■■□□□ 1.67
CCDC40-206ENST00000572083 G2E3Q7L622 706 aa25.46■■□□□ 1.67
CCDC40-206ENST00000572083 IFNL1Q8IU54 200 aa25.46■■□□□ 1.67
CCDC40-206ENST00000572083 SLC10A4Q96EP9 437 aa25.46■■□□□ 1.67
CCDC40-206ENST00000572083 MPHOSPH8Q99549 860 aa25.46■■□□□ 1.67
CCDC40-206ENST00000572083 PCDHAC2Q9Y5I4 1007 aa25.46■■□□□ 1.67
CCDC40-206ENST00000572083 ECM29Q5VYK3 1845 aa25.45■■□□□ 1.66
CCDC40-206ENST00000572083 MANSC4A6NHS7 340 aaPredicted RBP25.45■■□□□ 1.66
CCDC40-206ENST00000572083 DLGAP5Q15398 846 aa25.45■■□□□ 1.66
CCDC40-206ENST00000572083 CERS5Q8N5B7 392 aa25.45■■□□□ 1.66
CCDC40-206ENST00000572083 LAMB1P07942 1786 aa25.44■■□□□ 1.66
CCDC40-206ENST00000572083 SNAP23O00161 211 aa25.44■■□□□ 1.66
CCDC40-206ENST00000572083 IGF2BP3O00425 579 aaKnown RBP eCLIP25.44■■□□□ 1.66
CCDC40-206ENST00000572083 CHRNDQ07001 517 aa25.44■■□□□ 1.66
CCDC40-206ENST00000572083 OTOP1Q7RTM1 612 aa25.44■■□□□ 1.66
CCDC40-206ENST00000572083 WNK4Q96J92 1243 aa25.44■■□□□ 1.66
CCDC40-206ENST00000572083 CD209Q9NNX6 404 aa25.44■■□□□ 1.66
CCDC40-206ENST00000572083 POTEFA5A3E0 1075 aa25.43■■□□□ 1.66
CCDC40-206ENST00000572083 F8W031 263 aaPredicted RBP25.43■■□□□ 1.66
CCDC40-206ENST00000572083 MAP3K11Q16584 847 aa25.43■■□□□ 1.66
CCDC40-206ENST00000572083 PLA2G12BQ9BX93 195 aa25.43■■□□□ 1.66
CCDC40-206ENST00000572083 PRKRIP1Q9H875 184 aaPredicted RBP25.43■■□□□ 1.66
CCDC40-206ENST00000572083 A0A1B0GUL6 1792 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms