RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PRPF40BQ6NWY9 871 aaKnown RBP14.51□□□□□ -0.09
CDRT1-206ENST00000571263 VPS37DQ86XT2 251 aa14.51□□□□□ -0.09
CDRT1-206ENST00000571263 MPNDQ8N594 471 aa14.51□□□□□ -0.09
CDRT1-206ENST00000571263 EYA3Q99504 573 aa14.51□□□□□ -0.09
CDRT1-206ENST00000571263 HAUS7Q99871 368 aa14.51□□□□□ -0.09
CDRT1-206ENST00000571263 TLR7Q9NYK1 1049 aaKnown RBP14.51□□□□□ -0.09
CDRT1-206ENST00000571263 GSPT1P15170 499 aaKnown RBP14.5□□□□□ -0.09
CDRT1-206ENST00000571263 DPEP1P16444 411 aa14.5□□□□□ -0.09
CDRT1-206ENST00000571263 SDSP20132 328 aa14.5□□□□□ -0.09
CDRT1-206ENST00000571263 ARID4AP29374 1257 aaPredicted RBP14.5□□□□□ -0.09
CDRT1-206ENST00000571263 GPSM2P81274 684 aa14.5□□□□□ -0.09
CDRT1-206ENST00000571263 TTF1Q15361 905 aaPredicted RBP14.5□□□□□ -0.09
CDRT1-206ENST00000571263 DPP8Q6V1X1 898 aaPredicted RBP14.5□□□□□ -0.09
CDRT1-206ENST00000571263 RTKN2Q8IZC4 609 aa14.5□□□□□ -0.09
CDRT1-206ENST00000571263 SPEF2Q9C093 1822 aa14.5□□□□□ -0.09
CDRT1-206ENST00000571263 CDC45O75419 566 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 HIBADHP31937 336 aaKnown RBP14.49□□□□□ -0.09
CDRT1-206ENST00000571263 ZNF804AQ7Z570 1209 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 FBXO33Q7Z6M2 555 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 RILPL2Q969X0 211 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 VPS33BQ9H267 617 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 BOLA2Q9H3K6 86 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 DENND2AQ9ULE3 1009 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 DLEC1Q9Y238 1755 aa14.49□□□□□ -0.09
CDRT1-206ENST00000571263 TAF1P21675 1872 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 PDS5AQ29RF7 1337 aaKnown RBP14.48□□□□□ -0.09
CDRT1-206ENST00000571263 A0A0G2JLW4 131 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 UFL1O94874 794 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 KCNA3P22001 575 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 ADORA1P30542 326 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 DALRD3Q5D0E6 543 aaKnown RBP14.48□□□□□ -0.09
CDRT1-206ENST00000571263 TMED8Q6PL24 325 aaPredicted RBP14.48□□□□□ -0.09
CDRT1-206ENST00000571263 TBC1D16Q8TBP0 767 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 C7orf43Q8WVR3 580 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 FAM84BQ96KN1 310 aaPredicted RBP14.48□□□□□ -0.09
CDRT1-206ENST00000571263 RTFDC1Q9BY42 306 aaPredicted RBP14.48□□□□□ -0.09
CDRT1-206ENST00000571263 ZC3H12CQ9C0D7 883 aaKnown RBP14.48□□□□□ -0.09
CDRT1-206ENST00000571263 LRRC37AA6NMS7 1700 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 COL11A2P13942 1736 aaPredicted RBP14.48□□□□□ -0.09
CDRT1-206ENST00000571263 ARAP2Q8WZ64 1704 aa14.48□□□□□ -0.09
CDRT1-206ENST00000571263 RFX7Q2KHR2 1363 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 COL4A1P02462 1669 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 C6orf229H3BNL8 230 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 CCDC93Q567U6 631 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 TSHZ3Q63HK5 1081 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 ZSCAN25Q6NSZ9 544 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 RUFY2Q8WXA3 655 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 PAG1Q9NWQ8 432 aa14.47□□□□□ -0.09
CDRT1-206ENST00000571263 PPP1R1BQ9UD71 204 aaPredicted RBP14.47□□□□□ -0.09
CDRT1-206ENST00000571263 PHKA1P46020 1223 aa14.46□□□□□ -0.09
CDRT1-206ENST00000571263 BCAMP50895 628 aa14.46□□□□□ -0.09
CDRT1-206ENST00000571263 SPATA5Q8NB90 893 aa14.46□□□□□ -0.09
CDRT1-206ENST00000571263 BACH2Q9BYV9 841 aa14.46□□□□□ -0.09
CDRT1-206ENST00000571263 COA1Q9GZY4 146 aa14.46□□□□□ -0.09
CDRT1-206ENST00000571263 A0A1B0GUL6 1792 aa14.46□□□□□ -0.09
CDRT1-206ENST00000571263 FRAT2O75474 233 aaPredicted RBP14.45□□□□□ -0.1
CDRT1-206ENST00000571263 ZFYP08048 801 aaPredicted RBP14.45□□□□□ -0.1
CDRT1-206ENST00000571263 GYG1P46976 350 aa14.45□□□□□ -0.1
CDRT1-206ENST00000571263 FKBP4Q02790 459 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDRT1-206ENST00000571263 WASHC4Q2M389 1173 aa14.45□□□□□ -0.1
CDRT1-206ENST00000571263 ZGPATQ8N5A5 531 aaKnown RBP14.45□□□□□ -0.1
CDRT1-206ENST00000571263 KBTBD3Q8NAB2 608 aa14.45□□□□□ -0.1
CDRT1-206ENST00000571263 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
CDRT1-206ENST00000571263 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDRT1-206ENST00000571263 POLLQ9UGP5 575 aa14.45□□□□□ -0.1
CDRT1-206ENST00000571263 IRS2Q9Y4H2 1338 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 G3V3G9 751 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 SNAP23O00161 211 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 IL1R1P14778 569 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 MCAMP43121 646 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 C8orf34Q49A92 452 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 DCAF8Q5TAQ9 597 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 KLHL34Q8N239 644 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 TDRD7Q8NHU6 1098 aaKnown RBP14.44□□□□□ -0.1
CDRT1-206ENST00000571263 PSMD1Q99460 953 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 FSD1Q9BTV5 496 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 UPF2Q9HAU5 1272 aaKnown RBP14.44□□□□□ -0.1
CDRT1-206ENST00000571263 HMG20BQ9P0W2 317 aa14.44□□□□□ -0.1
CDRT1-206ENST00000571263 GOLIM4O00461 696 aa14.43□□□□□ -0.1
CDRT1-206ENST00000571263 EPB41L2O43491 1005 aaKnown RBP14.43□□□□□ -0.1
CDRT1-206ENST00000571263 C21orf2O43822 256 aa14.43□□□□□ -0.1
CDRT1-206ENST00000571263 SPTY2D1Q68D10 685 aaPredicted RBP14.43□□□□□ -0.1
CDRT1-206ENST00000571263 PODNQ7Z5L7 613 aa14.43□□□□□ -0.1
CDRT1-206ENST00000571263 WDR66Q8TBY9 1149 aa14.43□□□□□ -0.1
CDRT1-206ENST00000571263 CD209Q9NNX6 404 aa14.43□□□□□ -0.1
CDRT1-206ENST00000571263 DIAPH3Q9NSV4 1193 aa14.43□□□□□ -0.1
CDRT1-206ENST00000571263 CHMLP26374 656 aa14.42□□□□□ -0.1
CDRT1-206ENST00000571263 ZAP70P43403 619 aa14.42□□□□□ -0.1
CDRT1-206ENST00000571263 MAP3K12Q12852 859 aa14.42□□□□□ -0.1
CDRT1-206ENST00000571263 TBC1D9Q6ZT07 1266 aa14.42□□□□□ -0.1
CDRT1-206ENST00000571263 SLX4Q8IY92 1834 aa14.42□□□□□ -0.1
CDRT1-206ENST00000571263 RAD50Q92878 1312 aa14.41□□□□□ -0.1
CDRT1-206ENST00000571263 SALL1Q9NSC2 1324 aa14.41□□□□□ -0.1
CDRT1-206ENST00000571263 LTBP1Q14766 1721 aa14.41□□□□□ -0.1
CDRT1-206ENST00000571263 REC8O95072 547 aa14.41□□□□□ -0.1
CDRT1-206ENST00000571263 MAP4K4O95819 1239 aaPredicted RBP14.41□□□□□ -0.1
CDRT1-206ENST00000571263 CYP2E1P05181 493 aaPredicted RBP14.41□□□□□ -0.1
CDRT1-206ENST00000571263 MFAP1P55081 439 aaKnown RBP14.41□□□□□ -0.1
CDRT1-206ENST00000571263 RASGRF1Q13972 1273 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms