RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PCGF6Q9BYE7 350 aa9.55□□□□□ -0.88
SMG6-205ENST00000570659 ARHGAP39Q9C0H5 1083 aa9.55□□□□□ -0.88
SMG6-205ENST00000570659 PODXL2Q9NZ53 605 aa9.55□□□□□ -0.88
SMG6-205ENST00000570659 CHPF2Q9P2E5 772 aa9.55□□□□□ -0.88
SMG6-205ENST00000570659 PTCH2Q9Y6C5 1203 aa9.55□□□□□ -0.88
SMG6-205ENST00000570659 NFE2L2Q16236 605 aa9.54□□□□□ -0.88
SMG6-205ENST00000570659 WNK4Q96J92 1243 aa9.54□□□□□ -0.88
SMG6-205ENST00000570659 TSPYL4Q9UJ04 414 aa9.54□□□□□ -0.88
SMG6-205ENST00000570659 ANGEL1Q9UNK9 670 aaKnown RBP9.54□□□□□ -0.88
SMG6-205ENST00000570659 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
SMG6-205ENST00000570659 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
SMG6-205ENST00000570659 CTGFP29279 349 aa9.53□□□□□ -0.88
SMG6-205ENST00000570659 SH3TC2Q8TF17 1288 aa9.53□□□□□ -0.88
SMG6-205ENST00000570659 LRCH3Q96II8 777 aa9.53□□□□□ -0.88
SMG6-205ENST00000570659 ZC3H12CQ9C0D7 883 aaKnown RBP9.53□□□□□ -0.88
SMG6-205ENST00000570659 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 SNAP23O00161 211 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 USP17L1Q7RTZ2 530 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 TMC4Q7Z404 712 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 CERS5Q8N5B7 392 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 SLC17A8Q8NDX2 589 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 PNISRQ8TF01 805 aaKnown RBP9.52□□□□□ -0.89
SMG6-205ENST00000570659 EYA3Q99504 573 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 GGA1Q9UJY5 639 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 ALPK3Q96L96 1907 aa9.52□□□□□ -0.89
SMG6-205ENST00000570659 UNC80Q8N2C7 3258 aa9.51□□□□□ -0.89
SMG6-205ENST00000570659 SREBF2Q12772 1141 aa9.51□□□□□ -0.89
SMG6-205ENST00000570659 MTFR1Q15390 333 aa9.51□□□□□ -0.89
SMG6-205ENST00000570659 CFAP53Q96M91 514 aa9.51□□□□□ -0.89
SMG6-205ENST00000570659 ANKIB1Q9P2G1 1089 aa9.51□□□□□ -0.89
SMG6-205ENST00000570659 NBPF12Q5TAG4 269 aaPredicted RBP9.5□□□□□ -0.89
SMG6-205ENST00000570659 INTS3Q68E01 1043 aaKnown RBP9.5□□□□□ -0.89
SMG6-205ENST00000570659 UBE2Q1Q7Z7E8 422 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 KIAA0825Q8IV33 1275 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 PLBD2Q8NHP8 589 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 BRI3BPQ8WY22 251 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 MS4A4AQ96JQ5 239 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 EFCC1Q9HA90 598 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 NUDCQ9Y266 331 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 A0A1B0GUL6 1792 aa9.5□□□□□ -0.89
SMG6-205ENST00000570659 ECM29Q5VYK3 1845 aa9.49□□□□□ -0.89
SMG6-205ENST00000570659 CLRN2A0PK11 232 aa9.49□□□□□ -0.89
SMG6-205ENST00000570659 USP2O75604 605 aaPredicted RBP9.49□□□□□ -0.89
SMG6-205ENST00000570659 MAP3K11Q16584 847 aa9.49□□□□□ -0.89
SMG6-205ENST00000570659 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
SMG6-205ENST00000570659 FAM43AQ8N2R8 423 aa9.49□□□□□ -0.89
SMG6-205ENST00000570659 FBXW7Q969H0 707 aa9.49□□□□□ -0.89
SMG6-205ENST00000570659 PHAXQ9H814 394 aaKnown RBP9.49□□□□□ -0.89
SMG6-205ENST00000570659 IRS2Q9Y4H2 1338 aa9.49□□□□□ -0.89
SMG6-205ENST00000570659 TESPA1A2RU30 521 aaPredicted RBP9.48□□□□□ -0.89
SMG6-205ENST00000570659 MANSC4A6NHS7 340 aaPredicted RBP9.48□□□□□ -0.89
SMG6-205ENST00000570659 SP3Q02447 781 aa9.48□□□□□ -0.89
SMG6-205ENST00000570659 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
SMG6-205ENST00000570659 SLC10A4Q96EP9 437 aa9.48□□□□□ -0.89
SMG6-205ENST00000570659 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
SMG6-205ENST00000570659 JAG2Q9Y219 1238 aa9.48□□□□□ -0.89
SMG6-205ENST00000570659 XDHP47989 1333 aa9.48□□□□□ -0.89
SMG6-205ENST00000570659 Q7L0L9 218 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 ARMC9Q7Z3E5 817 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 PODNQ7Z5L7 613 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 ERO1AQ96HE7 468 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 GREM2Q9H772 168 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 ELP3Q9H9T3 547 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 MINPP1Q9UNW1 487 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 MED23Q9ULK4 1368 aa9.47□□□□□ -0.89
SMG6-205ENST00000570659 G3V3G9 751 aa9.46□□□□□ -0.9
SMG6-205ENST00000570659 CHL1O00533 1208 aa9.46□□□□□ -0.9
SMG6-205ENST00000570659 RIPK4P57078 832 aa9.46□□□□□ -0.9
SMG6-205ENST00000570659 TRIM28Q13263 835 aaKnown RBP9.46□□□□□ -0.9
SMG6-205ENST00000570659 SLC9C1Q4G0N8 1177 aa9.46□□□□□ -0.9
SMG6-205ENST00000570659 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
SMG6-205ENST00000570659 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.46□□□□□ -0.9
SMG6-205ENST00000570659 ZBTB38Q8NAP3 1195 aaPredicted RBP9.46□□□□□ -0.9
SMG6-205ENST00000570659 PRMT6Q96LA8 375 aaPredicted RBP9.46□□□□□ -0.9
SMG6-205ENST00000570659 MYD88Q99836 296 aa9.46□□□□□ -0.9
SMG6-205ENST00000570659 TRIM35Q9UPQ4 493 aa9.46□□□□□ -0.9
SMG6-205ENST00000570659 SPTBN5Q9NRC6 3674 aaKnown RBP9.45□□□□□ -0.9
SMG6-205ENST00000570659 EYSQ5T1H1 3165 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 VCANP13611 3396 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 F8W031 263 aaPredicted RBP9.45□□□□□ -0.9
SMG6-205ENST00000570659 ALDH1A1P00352 501 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 ZBTB48P10074 688 aaPredicted RBP9.45□□□□□ -0.9
SMG6-205ENST00000570659 ATP2B4P23634 1241 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 CCT4P50991 539 aaKnown RBP9.45□□□□□ -0.9
SMG6-205ENST00000570659 GTF2IP78347 998 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
SMG6-205ENST00000570659 SLC4A8Q2Y0W8 1093 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 HDGFL1Q5TGJ6 251 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 STRIP1Q5VSL9 837 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 OPTNQ96CV9 577 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 TEPSINQ96N21 525 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
SMG6-205ENST00000570659 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
SMG6-205ENST00000570659 MYH3P11055 1940 aa9.44□□□□□ -0.9
SMG6-205ENST00000570659 IGKV5-2P06315 115 aa9.44□□□□□ -0.9
SMG6-205ENST00000570659 TMPOP42166 694 aaKnown RBP9.44□□□□□ -0.9
SMG6-205ENST00000570659 GRIK5Q16478 980 aa9.44□□□□□ -0.9
SMG6-205ENST00000570659 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms