RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 CCDC85AQ96PX6 553 aaPredicted RBP13.9□□□□□ -0.18
LPCAT4-208ENST00000569804 MYD88Q99836 296 aa13.9□□□□□ -0.18
LPCAT4-208ENST00000569804 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
LPCAT4-208ENST00000569804 FBXO46Q6PJ61 603 aaPredicted RBP13.89□□□□□ -0.19
LPCAT4-208ENST00000569804 RIC3Q7Z5B4 369 aa13.89□□□□□ -0.19
LPCAT4-208ENST00000569804 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
LPCAT4-208ENST00000569804 ZBED3Q96IU2 234 aaPredicted RBP13.89□□□□□ -0.19
LPCAT4-208ENST00000569804 G3V3G9 751 aa13.88□□□□□ -0.19
LPCAT4-208ENST00000569804 CTSWP56202 376 aa13.88□□□□□ -0.19
LPCAT4-208ENST00000569804 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
LPCAT4-208ENST00000569804 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
LPCAT4-208ENST00000569804 CWC25Q9NXE8 425 aaPredicted RBP13.88□□□□□ -0.19
LPCAT4-208ENST00000569804 HDAC9Q9UKV0 1011 aa13.88□□□□□ -0.19
LPCAT4-208ENST00000569804 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
LPCAT4-208ENST00000569804 OTOFQ9HC10 1997 aa13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 IGKV5-2P06315 115 aa13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 HSP90B1P14625 803 aaKnown RBP13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 LDLRAD1Q5T700 205 aa13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 METTL22Q9BUU2 404 aaPredicted RBP13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
LPCAT4-208ENST00000569804 SASH1O94885 1247 aa13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 KLRK1P26718 216 aa13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 STRIP1Q5VSL9 837 aa13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 TTLL11Q8NHH1 800 aa13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 GREM2Q9H772 168 aa13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 BSDC1Q9NW68 430 aaPredicted RBP13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 MYO3BQ8WXR4 1341 aa13.86□□□□□ -0.19
LPCAT4-208ENST00000569804 FKTNO75072 461 aa13.85□□□□□ -0.19
LPCAT4-208ENST00000569804 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
LPCAT4-208ENST00000569804 SREBF2Q12772 1141 aa13.85□□□□□ -0.19
LPCAT4-208ENST00000569804 SPRYD7Q5W111 196 aa13.85□□□□□ -0.19
LPCAT4-208ENST00000569804 CDC5LQ99459 802 aaKnown RBP13.85□□□□□ -0.19
LPCAT4-208ENST00000569804 FZD1Q9UP38 647 aa13.85□□□□□ -0.19
LPCAT4-208ENST00000569804 IRS2Q9Y4H2 1338 aa13.85□□□□□ -0.19
LPCAT4-208ENST00000569804 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
LPCAT4-208ENST00000569804 C8orf58Q8NAV2 365 aa13.84□□□□□ -0.19
LPCAT4-208ENST00000569804 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
LPCAT4-208ENST00000569804 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
LPCAT4-208ENST00000569804 POTEFA5A3E0 1075 aa13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 IGF2BP3O00425 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 ELL2O00472 640 aaPredicted RBP13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 CAP1Q01518 475 aa13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 MAP3K11Q16584 847 aa13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 APOBEC3FQ8IUX4 373 aaKnown RBP13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 OGFOD1Q8N543 542 aa13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 MAP3K2Q9Y2U5 619 aa13.83□□□□□ -0.2
LPCAT4-208ENST00000569804 NF2P35240 595 aa13.82□□□□□ -0.2
LPCAT4-208ENST00000569804 PRKG1Q13976 671 aa13.82□□□□□ -0.2
LPCAT4-208ENST00000569804 OTOP1Q7RTM1 612 aa13.82□□□□□ -0.2
LPCAT4-208ENST00000569804 ARMC9Q7Z3E5 817 aa13.82□□□□□ -0.2
LPCAT4-208ENST00000569804 IFNL1Q8IU54 200 aa13.82□□□□□ -0.2
LPCAT4-208ENST00000569804 CEP290O15078 2479 aa13.82□□□□□ -0.2
LPCAT4-208ENST00000569804 MMP14P50281 582 aa13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 CWF19L2Q2TBE0 894 aaKnown RBP13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 HABP4Q5JVS0 413 aaKnown RBP13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 KIAA0825Q8IV33 1275 aa13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 CERS5Q8N5B7 392 aa13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 TSPYL6Q8N831 410 aa13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 ANGEL1Q9UNK9 670 aaKnown RBP13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 PCDHAC2Q9Y5I4 1007 aa13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 AOX1Q06278 1338 aa13.81□□□□□ -0.2
LPCAT4-208ENST00000569804 PI4KAP2A4QPH2 592 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 NEURL1BA8MQ27 555 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 ALDH1A1P00352 501 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 ZBTB48P10074 688 aaPredicted RBP13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 GJA5P36382 358 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 CASP7P55210 303 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 WDR43Q15061 677 aaKnown RBP eCLIP13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 TTLL5Q6EMB2 1281 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 KSR2Q6VAB6 950 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 PI4KAP1Q8N8J0 262 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 GCC1Q96CN9 775 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 WNK4Q96J92 1243 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 LEMD3Q9Y2U8 911 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 TRIM17Q9Y577 477 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 ARAP2Q8WZ64 1704 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 ZNF804BA4D1E1 1349 aa13.8□□□□□ -0.2
LPCAT4-208ENST00000569804 MANSC4A6NHS7 340 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 H7C1W4 665 aa13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 GNAI1P63096 354 aa13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 GTF2IP78347 998 aa13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 PLA2G12BQ9BX93 195 aa13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 SZT2Q5T011 3432 aa13.79□□□□□ -0.2
LPCAT4-208ENST00000569804 TRIOBPQ9H2D6 2365 aa13.78□□□□□ -0.2
LPCAT4-208ENST00000569804 APAF1O14727 1248 aa13.78□□□□□ -0.2
LPCAT4-208ENST00000569804 CCDC30Q5VVM6 783 aa13.78□□□□□ -0.2
LPCAT4-208ENST00000569804 UBE3BQ7Z3V4 1068 aa13.78□□□□□ -0.2
LPCAT4-208ENST00000569804 ARMC5Q96C12 935 aa13.78□□□□□ -0.2
LPCAT4-208ENST00000569804 ZSWIM8A7E2V4 1837 aa13.78□□□□□ -0.2
LPCAT4-208ENST00000569804 SNAP23O00161 211 aa13.77□□□□□ -0.21
LPCAT4-208ENST00000569804 CSF1RP07333 972 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms