RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 SSH3Q8TE77 659 aa16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 DBNDD1Q9H9R9 158 aa16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 POLR2AP24928 1970 aaKnown RBP16.03■□□□□ 0.16
CNEP1R1-211ENST00000569647 IRX6P78412 446 aaPredicted RBP16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 POLA2Q14181 598 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 TNIP1Q15025 636 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 TAF7LQ5H9L4 462 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 USP50Q70EL3 339 aaPredicted RBP16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 SIRT2Q8IXJ6 389 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 CNTROBQ8N137 903 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 JMYQ8N9B5 988 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 GGA1Q9UJY5 639 aa16.02■□□□□ 0.16
CNEP1R1-211ENST00000569647 XDHP47989 1333 aa16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 ECE2O60344 883 aa16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 AAMPQ13685 434 aa16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 COPRSQ9NQ92 184 aa16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 ADARB2Q9NS39 739 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 MINPP1Q9UNW1 487 aa16.01■□□□□ 0.15
CNEP1R1-211ENST00000569647 PSMD14O00487 310 aa16■□□□□ 0.15
CNEP1R1-211ENST00000569647 LDHAL6AQ6ZMR3 332 aa16■□□□□ 0.15
CNEP1R1-211ENST00000569647 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
CNEP1R1-211ENST00000569647 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
CNEP1R1-211ENST00000569647 ZNF646O15015 1829 aaPredicted RBP15.99■□□□□ 0.15
CNEP1R1-211ENST00000569647 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
CNEP1R1-211ENST00000569647 KCNQ5Q9NR82 932 aa15.99■□□□□ 0.15
CNEP1R1-211ENST00000569647 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
CNEP1R1-211ENST00000569647 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
CNEP1R1-211ENST00000569647 RIPOR2Q9Y4F9 1068 aa15.99■□□□□ 0.15
CNEP1R1-211ENST00000569647 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
CNEP1R1-211ENST00000569647 SHTN1A0MZ66 631 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 TMEM88BA6NKF7 163 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 EYA2O00167 538 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 CIAO1O76071 339 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 ATP2B4P23634 1241 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 CHRNDQ07001 517 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 CNNM1Q9NRU3 951 aa15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 CNOT7Q9UIV1 285 aaKnown RBP15.98■□□□□ 0.15
CNEP1R1-211ENST00000569647 WTIPA6NIX2 430 aaPredicted RBP15.97■□□□□ 0.15
CNEP1R1-211ENST00000569647 MICALL2Q8IY33 904 aa15.97■□□□□ 0.15
CNEP1R1-211ENST00000569647 TRPM4Q8TD43 1214 aa15.97■□□□□ 0.15
CNEP1R1-211ENST00000569647 DPF2Q92785 391 aa15.97■□□□□ 0.15
CNEP1R1-211ENST00000569647 SIL1Q9H173 461 aa15.97■□□□□ 0.15
CNEP1R1-211ENST00000569647 NOP58Q9Y2X3 529 aaKnown RBP15.97■□□□□ 0.15
CNEP1R1-211ENST00000569647 G3V3G9 751 aa15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 H7C1D1 291 aa15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 HMMRO75330 724 aa15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 VGLL2Q8N8G2 317 aa15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 ANKRD2Q9GZV1 360 aa15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 MKRN1Q9UHC7 482 aaKnown RBP15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 CNTNAP1P78357 1384 aa15.96■□□□□ 0.15
CNEP1R1-211ENST00000569647 MROH5Q6ZUA9 1318 aa15.95■□□□□ 0.14
CNEP1R1-211ENST00000569647 RPS12P25398 132 aaKnown RBP15.95■□□□□ 0.14
CNEP1R1-211ENST00000569647 HIRAP54198 1017 aaPredicted RBP15.95■□□□□ 0.14
CNEP1R1-211ENST00000569647 FMR1Q06787 632 aaKnown RBP eCLIP15.95■□□□□ 0.14
CNEP1R1-211ENST00000569647 MED23Q9ULK4 1368 aa15.95■□□□□ 0.14
CNEP1R1-211ENST00000569647 ARAP2Q8WZ64 1704 aa15.94■□□□□ 0.14
CNEP1R1-211ENST00000569647 VIL1P09327 827 aaKnown RBP15.94■□□□□ 0.14
CNEP1R1-211ENST00000569647 IL15P40933 162 aaPredicted RBP15.94■□□□□ 0.14
CNEP1R1-211ENST00000569647 HELBQ8NG08 1087 aaPredicted RBP15.94■□□□□ 0.14
CNEP1R1-211ENST00000569647 PGAP2Q9UHJ9 254 aa15.94■□□□□ 0.14
CNEP1R1-211ENST00000569647 ZNF609O15014 1411 aa15.94■□□□□ 0.14
CNEP1R1-211ENST00000569647 TRAF5O00463 557 aa15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 TAF5LO75529 589 aa15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 SURF6O75683 361 aaKnown RBP15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 EGFRP00533 1210 aa15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 SAMD7Q7Z3H4 446 aa15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 ZC3H15Q8WU90 426 aaKnown RBP15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 LEMD3Q9Y2U8 911 aa15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 IRS2Q9Y4H2 1338 aa15.93■□□□□ 0.14
CNEP1R1-211ENST00000569647 SNAP23O00161 211 aa15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 SASH1O94885 1247 aa15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 PDE8BO95263 885 aa15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 G3BP1Q13283 466 aaKnown RBP eCLIP15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 HDAC1Q13547 482 aaPredicted RBP15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 TBC1D10BQ4KMP7 808 aaPredicted RBP15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 PODNQ7Z5L7 613 aa15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 EXOC6BQ9Y2D4 811 aa15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 ZNF804BA4D1E1 1349 aa15.92■□□□□ 0.14
CNEP1R1-211ENST00000569647 RASSF10A6NK89 507 aa15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 FGFR2P21802 821 aa15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 UBE4AQ14139 1066 aa15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 CST9Q5W186 159 aa15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 TXNRD3Q86VQ6 643 aa15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 GLIS2Q9BZE0 524 aaPredicted RBP15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 CEP126Q9P2H0 1117 aa15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
CNEP1R1-211ENST00000569647 USP17L3A6NCW0 530 aa15.9■□□□□ 0.14
CNEP1R1-211ENST00000569647 USP17L4A6NCW7 530 aa15.9■□□□□ 0.14
CNEP1R1-211ENST00000569647 NEFLP07196 543 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms