RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 YBX3P16989 372 aaKnown RBP eCLIP28.79■■■□□ 2.2
RAB40C-212ENST00000569575 B4GALNT3Q6L9W6 998 aa28.79■■■□□ 2.2
RAB40C-212ENST00000569575 ARHGAP27Q6ZUM4 889 aa28.79■■■□□ 2.2
RAB40C-212ENST00000569575 AACSQ86V21 672 aa28.79■■■□□ 2.2
RAB40C-212ENST00000569575 NEUROD6Q96NK8 337 aa28.79■■■□□ 2.2
RAB40C-212ENST00000569575 IL1RAPL2Q9NP60 686 aa28.79■■■□□ 2.2
RAB40C-212ENST00000569575 TIMM10P62072 90 aa28.78■■■□□ 2.2
RAB40C-212ENST00000569575 ZNF804AQ7Z570 1209 aa28.78■■■□□ 2.2
RAB40C-212ENST00000569575 ZNF512BQ96KM6 892 aaPredicted RBP28.78■■■□□ 2.2
RAB40C-212ENST00000569575 COA1Q9GZY4 146 aa28.78■■■□□ 2.2
RAB40C-212ENST00000569575 GNL3LQ9NVN8 582 aaKnown RBP28.78■■■□□ 2.2
RAB40C-212ENST00000569575 ARAP2Q8WZ64 1704 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 IRS2Q9Y4H2 1338 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 NFKBIEO00221 500 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 CCDC158Q5M9N0 1113 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 PELP1Q8IZL8 1130 aaKnown RBP28.77■■■□□ 2.2
RAB40C-212ENST00000569575 XAGE2Q96GT9 111 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 GPATCH3Q96I76 525 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 WWC3Q9ULE0 1092 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 GTF3C3Q9Y5Q9 886 aa28.77■■■□□ 2.2
RAB40C-212ENST00000569575 SEMA3EO15041 775 aa28.76■■■□□ 2.19
RAB40C-212ENST00000569575 HIBADHP31937 336 aaKnown RBP28.76■■■□□ 2.19
RAB40C-212ENST00000569575 IARSP41252 1262 aaKnown RBP28.76■■■□□ 2.19
RAB40C-212ENST00000569575 GORABQ5T7V8 394 aa28.76■■■□□ 2.19
RAB40C-212ENST00000569575 PODNQ7Z5L7 613 aa28.76■■■□□ 2.19
RAB40C-212ENST00000569575 FBXO33Q7Z6M2 555 aa28.76■■■□□ 2.19
RAB40C-212ENST00000569575 LMNB1P20700 586 aa28.75■■■□□ 2.19
RAB40C-212ENST00000569575 VPS37DQ86XT2 251 aa28.75■■■□□ 2.19
RAB40C-212ENST00000569575 UQCRFS1P1P0C7P4 283 aa28.74■■■□□ 2.19
RAB40C-212ENST00000569575 FAM84BQ96KN1 310 aaPredicted RBP28.74■■■□□ 2.19
RAB40C-212ENST00000569575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.74■■■□□ 2.19
RAB40C-212ENST00000569575 TTC41PQ6P2S7 1318 aa28.73■■■□□ 2.19
RAB40C-212ENST00000569575 G3V3G9 751 aa28.73■■■□□ 2.19
RAB40C-212ENST00000569575 PPIP5K2O43314 1243 aa28.73■■■□□ 2.19
RAB40C-212ENST00000569575 DCAF8Q5TAQ9 597 aa28.73■■■□□ 2.19
RAB40C-212ENST00000569575 JDP2Q8WYK2 163 aa28.73■■■□□ 2.19
RAB40C-212ENST00000569575 DBNLQ9UJU6 430 aaKnown RBP28.73■■■□□ 2.19
RAB40C-212ENST00000569575 SMARCA5O60264 1052 aaPredicted RBP28.72■■■□□ 2.19
RAB40C-212ENST00000569575 LARGE2Q8N3Y3 721 aa28.72■■■□□ 2.19
RAB40C-212ENST00000569575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.72■■■□□ 2.19
RAB40C-212ENST00000569575 IL1R1P14778 569 aa28.71■■■□□ 2.19
RAB40C-212ENST00000569575 CCDC102BQ68D86 513 aa28.71■■■□□ 2.19
RAB40C-212ENST00000569575 LNPKQ9C0E8 428 aa28.71■■■□□ 2.19
RAB40C-212ENST00000569575 CCDC8Q9H0W5 538 aaPredicted RBP28.71■■■□□ 2.19
RAB40C-212ENST00000569575 SNAP23O00161 211 aa28.7■■■□□ 2.18
RAB40C-212ENST00000569575 IGSF3O75054 1194 aa28.7■■■□□ 2.18
RAB40C-212ENST00000569575 SLC51AQ86UW1 340 aa28.7■■■□□ 2.18
RAB40C-212ENST00000569575 DBNDD2Q9BQY9 259 aa28.7■■■□□ 2.18
RAB40C-212ENST00000569575 CD209Q9NNX6 404 aa28.7■■■□□ 2.18
RAB40C-212ENST00000569575 ZNF277Q9NRM2 450 aaPredicted RBP28.7■■■□□ 2.18
RAB40C-212ENST00000569575 ECHDC1Q9NTX5 307 aa28.7■■■□□ 2.18
RAB40C-212ENST00000569575 STAP2Q9UGK3 403 aa28.7■■■□□ 2.18
RAB40C-212ENST00000569575 AOX1Q06278 1338 aa28.69■■■□□ 2.18
RAB40C-212ENST00000569575 PDS5AQ29RF7 1337 aaKnown RBP28.69■■■□□ 2.18
RAB40C-212ENST00000569575 ERC2O15083 957 aa28.69■■■□□ 2.18
RAB40C-212ENST00000569575 ARID4AP29374 1257 aaPredicted RBP28.69■■■□□ 2.18
RAB40C-212ENST00000569575 AOC3Q16853 763 aa28.69■■■□□ 2.18
RAB40C-212ENST00000569575 NIM1KQ8IY84 436 aa28.69■■■□□ 2.18
RAB40C-212ENST00000569575 TDRD7Q8NHU6 1098 aaKnown RBP28.69■■■□□ 2.18
RAB40C-212ENST00000569575 OSBPL3Q9H4L5 887 aa28.69■■■□□ 2.18
RAB40C-212ENST00000569575 ZC3H4Q9UPT8 1303 aaKnown RBP28.69■■■□□ 2.18
RAB40C-212ENST00000569575 WTIPA6NIX2 430 aaPredicted RBP28.68■■■□□ 2.18
RAB40C-212ENST00000569575 RIMBP2O15034 1052 aa28.68■■■□□ 2.18
RAB40C-212ENST00000569575 MX1P20591 662 aa28.68■■■□□ 2.18
RAB40C-212ENST00000569575 GYG1P46976 350 aa28.68■■■□□ 2.18
RAB40C-212ENST00000569575 TXNRD3Q86VQ6 643 aa28.68■■■□□ 2.18
RAB40C-212ENST00000569575 DENND2AQ9ULE3 1009 aa28.68■■■□□ 2.18
RAB40C-212ENST00000569575 DICER1Q9UPY3 1922 aaKnown RBP28.67■■■□□ 2.18
RAB40C-212ENST00000569575 ATP5JP18859 108 aa28.67■■■□□ 2.18
RAB40C-212ENST00000569575 ADORA1P30542 326 aa28.67■■■□□ 2.18
RAB40C-212ENST00000569575 BCAMP50895 628 aa28.67■■■□□ 2.18
RAB40C-212ENST00000569575 TTC39AQ5SRH9 613 aa28.67■■■□□ 2.18
RAB40C-212ENST00000569575 ZNRF3Q9ULT6 936 aa28.67■■■□□ 2.18
RAB40C-212ENST00000569575 SBF1O95248 1867 aa28.67■■■□□ 2.18
RAB40C-212ENST00000569575 SALL3Q9BXA9 1300 aa28.67■■■□□ 2.18
RAB40C-212ENST00000569575 CHD4Q14839 1912 aa28.66■■■□□ 2.18
RAB40C-212ENST00000569575 KLRK1P26718 216 aa28.65■■■□□ 2.18
RAB40C-212ENST00000569575 ECE2O60344 883 aa28.64■■■□□ 2.18
RAB40C-212ENST00000569575 GLRX3O76003 335 aaKnown RBP28.64■■■□□ 2.18
RAB40C-212ENST00000569575 PHKA1P46020 1223 aa28.64■■■□□ 2.18
RAB40C-212ENST00000569575 PDE1AP54750 535 aa28.64■■■□□ 2.18
RAB40C-212ENST00000569575 RASSF7Q02833 373 aa28.64■■■□□ 2.18
RAB40C-212ENST00000569575 CCDC88AQ3V6T2 1871 aa28.63■■■□□ 2.17
RAB40C-212ENST00000569575 FRAT2O75474 233 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-212ENST00000569575 C16orf71Q8IYS4 520 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-212ENST00000569575 TBC1D22AQ8WUA7 517 aa28.63■■■□□ 2.17
RAB40C-212ENST00000569575 GPR101Q96P66 508 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-212ENST00000569575 TLR7Q9NYK1 1049 aaKnown RBP28.63■■■□□ 2.17
RAB40C-212ENST00000569575 FAM205AQ6ZU69 1335 aa28.63■■■□□ 2.17
RAB40C-212ENST00000569575 FKBP1AP62942 108 aaKnown RBP28.62■■■□□ 2.17
RAB40C-212ENST00000569575 STRIP1Q5VSL9 837 aa28.62■■■□□ 2.17
RAB40C-212ENST00000569575 TICAM2Q86XR7 235 aa28.62■■■□□ 2.17
RAB40C-212ENST00000569575 PLEKHM2Q8IWE5 1019 aa28.62■■■□□ 2.17
RAB40C-212ENST00000569575 WDR66Q8TBY9 1149 aa28.62■■■□□ 2.17
RAB40C-212ENST00000569575 FZD9O00144 591 aa28.61■■■□□ 2.17
RAB40C-212ENST00000569575 MMP14P50281 582 aa28.61■■■□□ 2.17
RAB40C-212ENST00000569575 ZGPATQ8N5A5 531 aaKnown RBP28.61■■■□□ 2.17
RAB40C-212ENST00000569575 EIF6P56537 245 aaKnown RBP28.6■■■□□ 2.17
RAB40C-212ENST00000569575 TNIP1Q15025 636 aa28.6■■■□□ 2.17
RAB40C-212ENST00000569575 DOK7Q18PE1 504 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms