RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 RPS12P25398 132 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-218ENST00000569569 CNOT7Q9UIV1 285 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-218ENST00000569569 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
HERPUD1-218ENST00000569569 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-218ENST00000569569 MROH5Q6ZUA9 1318 aa17.28■□□□□ 0.36
HERPUD1-218ENST00000569569 H7C1D1 291 aa17.28■□□□□ 0.36
HERPUD1-218ENST00000569569 SNAP23O00161 211 aa17.28■□□□□ 0.36
HERPUD1-218ENST00000569569 APLP1P51693 650 aa17.28■□□□□ 0.36
HERPUD1-218ENST00000569569 C15orf52Q6ZUT6 534 aaKnown RBP17.28■□□□□ 0.36
HERPUD1-218ENST00000569569 USP17L3A6NCW0 530 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 USP17L4A6NCW7 530 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 KLRK1P26718 216 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 RFX5P48382 616 aaPredicted RBP17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 FTSJ3Q8IY81 847 aaKnown RBP17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 KLHDC4Q8TBB5 520 aa17.27■□□□□ 0.36
HERPUD1-218ENST00000569569 ZNF646O15015 1829 aaPredicted RBP17.26■□□□□ 0.35
HERPUD1-218ENST00000569569 PTPN12Q05209 780 aaKnown RBP17.26■□□□□ 0.35
HERPUD1-218ENST00000569569 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
HERPUD1-218ENST00000569569 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
HERPUD1-218ENST00000569569 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
HERPUD1-218ENST00000569569 IRS2Q9Y4H2 1338 aa17.25■□□□□ 0.35
HERPUD1-218ENST00000569569 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
HERPUD1-218ENST00000569569 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
HERPUD1-218ENST00000569569 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
HERPUD1-218ENST00000569569 ZNF609O15014 1411 aa17.24■□□□□ 0.35
HERPUD1-218ENST00000569569 EYA2O00167 538 aa17.24■□□□□ 0.35
HERPUD1-218ENST00000569569 PDE8BO95263 885 aa17.24■□□□□ 0.35
HERPUD1-218ENST00000569569 GNAI2P04899 355 aa17.24■□□□□ 0.35
HERPUD1-218ENST00000569569 STRIP1Q5VSL9 837 aa17.24■□□□□ 0.35
HERPUD1-218ENST00000569569 ZNF804AQ7Z570 1209 aa17.24■□□□□ 0.35
HERPUD1-218ENST00000569569 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
HERPUD1-218ENST00000569569 TRPM7Q96QT4 1865 aa17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 MS4A1P11836 297 aa17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 GMLQ99445 158 aa17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
HERPUD1-218ENST00000569569 RLBP1P12271 317 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 IL1R1P14778 569 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 HIRAP54198 1017 aaPredicted RBP17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 MTX1Q13505 466 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 DACT2Q5SW24 774 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 SAMD7Q7Z3H4 446 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 ITPRIPQ8IWB1 547 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 VGLL2Q8N8G2 317 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 ZC3H15Q8WU90 426 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
HERPUD1-218ENST00000569569 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 SRGAP3O43295 1099 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 CIAO1O76071 339 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 GTF2IP78347 998 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
HERPUD1-218ENST00000569569 CEP350Q5VT06 3117 aa17.21■□□□□ 0.34
HERPUD1-218ENST00000569569 USP17L8P0C7I0 530 aa17.2■□□□□ 0.34
HERPUD1-218ENST00000569569 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-218ENST00000569569 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-218ENST00000569569 RBM26Q5T8P6 1007 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-218ENST00000569569 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-218ENST00000569569 SIL1Q9H173 461 aa17.2■□□□□ 0.34
HERPUD1-218ENST00000569569 MYH13Q9UKX3 1938 aa17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 ZBTB7BO15156 539 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 SASH1O94885 1247 aa17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 GYG1P46976 350 aa17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 MMP14P50281 582 aa17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 ZNF280AP59817 542 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 PUM3Q15397 648 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-218ENST00000569569 EGFRP00533 1210 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 IFIT1P09914 478 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 FGFR2P21802 821 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 HTRA3P83110 453 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 OGFOD1Q8N543 542 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 TDRD7Q8NHU6 1098 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
HERPUD1-218ENST00000569569 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-218ENST00000569569 LPIN2Q92539 896 aa17.17■□□□□ 0.34
HERPUD1-218ENST00000569569 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
HERPUD1-218ENST00000569569 CREBZFQ9NS37 354 aa17.17■□□□□ 0.34
HERPUD1-218ENST00000569569 PNMA6EA0A0J9YXQ4 647 aa17.16■□□□□ 0.34
HERPUD1-218ENST00000569569 SLC5A1P13866 664 aa17.16■□□□□ 0.34
HERPUD1-218ENST00000569569 ATP8B2P98198 1209 aa17.16■□□□□ 0.34
HERPUD1-218ENST00000569569 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms