RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 CTNNA3Q9UI47 895 aa23.78■■□□□ 1.4
SCRT1-201ENST00000569446 CPLX3Q8WVH0 158 aa23.77■■□□□ 1.4
SCRT1-201ENST00000569446 STX1AQ16623 288 aa23.77■■□□□ 1.4
SCRT1-201ENST00000569446 NEURL4Q96JN8 1562 aa23.77■■□□□ 1.4
SCRT1-201ENST00000569446 RNF113AO15541 343 aaKnown RBP23.77■■□□□ 1.4
SCRT1-201ENST00000569446 SAFBQ15424 915 aaKnown RBP eCLIP23.77■■□□□ 1.4
SCRT1-201ENST00000569446 LRP2BPQ9P2M1 347 aa23.77■■□□□ 1.4
SCRT1-201ENST00000569446 CYP27B1O15528 508 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 IL15P40933 162 aaPredicted RBP23.76■■□□□ 1.39
SCRT1-201ENST00000569446 MIGA1Q8NAN2 632 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 AIFM3Q96NN9 605 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 SLC26A6Q9BXS9 759 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.76■■□□□ 1.39
SCRT1-201ENST00000569446 ERICH2A1L162 156 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 AP5Z1O43299 807 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 HSPD1P10809 573 aaKnown RBP23.76■■□□□ 1.39
SCRT1-201ENST00000569446 ATP2B3Q16720 1220 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 C11orf57Q6ZUT1 292 aaPredicted RBP23.76■■□□□ 1.39
SCRT1-201ENST00000569446 PGBD1Q96JS3 809 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 C19orf44Q9H6X5 657 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 BCL2L12Q9HB09 334 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 hCG_1642624A0A1W2PR95 340 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 CCDC69A6NI79 296 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 CLSTN2Q9H4D0 955 aa23.76■■□□□ 1.39
SCRT1-201ENST00000569446 ZSCAN16Q9H4T2 348 aaPredicted RBP23.76■■□□□ 1.39
SCRT1-201ENST00000569446 B4E1Z4 1266 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 IFIT3O14879 490 aaKnown RBP23.75■■□□□ 1.39
SCRT1-201ENST00000569446 HMGB1P09429 215 aaKnown RBP23.75■■□□□ 1.39
SCRT1-201ENST00000569446 IFNKQ9P0W0 207 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 DLC1Q96QB1 1528 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 EYA2O00167 538 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 ADD1P35611 737 aaKnown RBP23.75■■□□□ 1.39
SCRT1-201ENST00000569446 XAGE2Q96GT9 111 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 ZSWIM4Q9H7M6 989 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 JAG2Q9Y219 1238 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 ERBB3P21860 1342 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 SFPQP23246 707 aaKnown RBP eCLIP23.75■■□□□ 1.39
SCRT1-201ENST00000569446 OLFM4Q6UX06 510 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 NAPBQ9H115 298 aa23.75■■□□□ 1.39
SCRT1-201ENST00000569446 ZNF75DP51815 510 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 CEP135Q66GS9 1140 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 INCENPQ9NQS7 918 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 DNAJC10Q8IXB1 793 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 MNS1Q8NEH6 495 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 MYRIPQ8NFW9 859 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 PLBD2Q8NHP8 589 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 MRPS27Q92552 414 aaKnown RBP23.74■■□□□ 1.39
SCRT1-201ENST00000569446 ALG1Q9BT22 464 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 ERICH4A6NGS2 130 aa23.74■■□□□ 1.39
SCRT1-201ENST00000569446 METAP2P50579 478 aaKnown RBP eCLIP23.73■■□□□ 1.39
SCRT1-201ENST00000569446 PRIMPOLQ96LW4 560 aa23.73■■□□□ 1.39
SCRT1-201ENST00000569446 ST3GAL1Q11201 340 aa23.73■■□□□ 1.39
SCRT1-201ENST00000569446 MTERF4Q7Z6M4 381 aaKnown RBP23.73■■□□□ 1.39
SCRT1-201ENST00000569446 ACSBG1Q96GR2 724 aa23.73■■□□□ 1.39
SCRT1-201ENST00000569446 TMEM67Q5HYA8 995 aa23.72■■□□□ 1.39
SCRT1-201ENST00000569446 NCOA7Q8NI08 942 aa23.72■■□□□ 1.39
SCRT1-201ENST00000569446 SPTLC2O15270 562 aa23.72■■□□□ 1.39
SCRT1-201ENST00000569446 STOX1Q6ZVD7 989 aa23.72■■□□□ 1.39
SCRT1-201ENST00000569446 CACTINQ8WUQ7 758 aaKnown RBP23.72■■□□□ 1.39
SCRT1-201ENST00000569446 RAI14Q9P0K7 980 aa23.72■■□□□ 1.39
SCRT1-201ENST00000569446 GOLGA8AA7E2F4 631 aa23.71■■□□□ 1.39
SCRT1-201ENST00000569446 NUTM2BA6NNL0 878 aaPredicted RBP23.71■■□□□ 1.39
SCRT1-201ENST00000569446 NUTM2EB1AL46 878 aaPredicted RBP23.71■■□□□ 1.39
SCRT1-201ENST00000569446 NUTM2AQ8IVF1 878 aaPredicted RBP23.71■■□□□ 1.39
SCRT1-201ENST00000569446 ADAMTS2O95450 1211 aa23.71■■□□□ 1.39
SCRT1-201ENST00000569446 GOLGA8FQ08AF8 430 aa23.71■■□□□ 1.39
SCRT1-201ENST00000569446 GOLGA8DPQ0D2H9 430 aa23.71■■□□□ 1.39
SCRT1-201ENST00000569446 OSBP2Q969R2 916 aa23.71■■□□□ 1.39
SCRT1-201ENST00000569446 RIMS1Q86UR5 1692 aaKnown RBP23.71■■□□□ 1.39
SCRT1-201ENST00000569446 GPAA1O43292 621 aa23.7■■□□□ 1.39
SCRT1-201ENST00000569446 MAPK8IP2Q13387 824 aaPredicted RBP23.7■■□□□ 1.39
SCRT1-201ENST00000569446 COPRSQ9NQ92 184 aa23.7■■□□□ 1.39
SCRT1-201ENST00000569446 AKAP2Q9Y2D5 859 aa23.7■■□□□ 1.39
SCRT1-201ENST00000569446 CLIC4Q9Y696 253 aa23.7■■□□□ 1.39
SCRT1-201ENST00000569446 ZSCAN25Q6NSZ9 544 aa23.7■■□□□ 1.38
SCRT1-201ENST00000569446 NRKQ7Z2Y5 1582 aa23.7■■□□□ 1.38
SCRT1-201ENST00000569446 URI1O94763 535 aaPredicted RBP23.7■■□□□ 1.38
SCRT1-201ENST00000569446 FGAP02671 866 aa23.7■■□□□ 1.38
SCRT1-201ENST00000569446 HAUS7Q99871 368 aa23.7■■□□□ 1.38
SCRT1-201ENST00000569446 RAD21O60216 631 aa23.69■■□□□ 1.38
SCRT1-201ENST00000569446 STARD3NLO95772 234 aa23.69■■□□□ 1.38
SCRT1-201ENST00000569446 M0R2C6 588 aa23.69■■□□□ 1.38
SCRT1-201ENST00000569446 IARSP41252 1262 aaKnown RBP23.69■■□□□ 1.38
SCRT1-201ENST00000569446 CNNM3Q8NE01 707 aa23.69■■□□□ 1.38
SCRT1-201ENST00000569446 NSUN7Q8NE18 718 aaKnown RBP23.69■■□□□ 1.38
SCRT1-201ENST00000569446 SYKP43405 635 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 SKIDA1Q1XH10 827 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 CCDC24Q8N4L8 307 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 SLC12A7Q9Y666 1083 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 KIF20BQ96Q89 1820 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 MTX1Q13505 466 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 TRERF1Q96PN7 1200 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 ANKRD18BA2A2Z9 1011 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 PDIA3P30101 505 aaKnown RBP23.68■■□□□ 1.38
SCRT1-201ENST00000569446 PDIA6Q15084 440 aa23.68■■□□□ 1.38
SCRT1-201ENST00000569446 KIAA1524Q8TCG1 905 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms