RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 ZSCAN25Q6NSZ9 544 aa11.5□□□□□ -0.57
LINC00555-201ENST00000569288 RILPL2Q969X0 211 aa11.5□□□□□ -0.57
LINC00555-201ENST00000569288 XAGE2Q96GT9 111 aa11.5□□□□□ -0.57
LINC00555-201ENST00000569288 NEUROD6Q96NK8 337 aa11.5□□□□□ -0.57
LINC00555-201ENST00000569288 DBNDD2Q9BQY9 259 aa11.5□□□□□ -0.57
LINC00555-201ENST00000569288 SLX4Q8IY92 1834 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 NPHP1O15259 732 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 SRGNP10124 158 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 GORABQ5T7V8 394 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 STYK1Q6J9G0 422 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 KIAA1211Q6ZU35 1233 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 KCNB2Q92953 911 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 HELLSQ9NRZ9 838 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 GNL3LQ9NVN8 582 aaKnown RBP11.49□□□□□ -0.57
LINC00555-201ENST00000569288 LEMD3Q9Y2U8 911 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 SPEF2Q9C093 1822 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 TAF1P21675 1872 aa11.49□□□□□ -0.57
LINC00555-201ENST00000569288 UTRNP46939 3433 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 DPEP1P16444 411 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 GRAPQ13588 217 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 RABEP1Q15276 862 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 GRAPLQ8TC17 118 aaPredicted RBP11.48□□□□□ -0.57
LINC00555-201ENST00000569288 MASTLQ96GX5 879 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
LINC00555-201ENST00000569288 BOLA2Q9H3K6 86 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 PAG1Q9NWQ8 432 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 PIM2Q9P1W9 311 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 MINPP1Q9UNW1 487 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
LINC00555-201ENST00000569288 SBF1O95248 1867 aa11.48□□□□□ -0.57
LINC00555-201ENST00000569288 CCDC88AQ3V6T2 1871 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 A0A0G2JLW4 131 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 NPR1P16066 1061 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 ALDH1B1P30837 517 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 MCM2P49736 904 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 CHRNDQ07001 517 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 TSGA10IPQ3SY00 556 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 TTC39AQ5SRH9 613 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 C2CD5Q86YS7 1000 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 SEC31BQ9NQW1 1179 aa11.47□□□□□ -0.57
LINC00555-201ENST00000569288 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
LINC00555-201ENST00000569288 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 FAM177BA6PVY3 158 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 UBE3CQ15386 1083 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 MCMDC2Q4G0Z9 681 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 CAVIN4Q5BKX8 364 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 MAP4K1Q92918 833 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 TM6SF1Q9BZW5 370 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00555-201ENST00000569288 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.57
LINC00555-201ENST00000569288 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
LINC00555-201ENST00000569288 CHRNA5P30532 468 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 HSPA4P34932 840 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 TSHZ3Q63HK5 1081 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 CCDC102BQ68D86 513 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 FBXO33Q7Z6M2 555 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 TTLL6Q8N841 843 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 FSD1Q9BTV5 496 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
LINC00555-201ENST00000569288 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
LINC00555-201ENST00000569288 RNF113AO15541 343 aaKnown RBP11.44□□□□□ -0.58
LINC00555-201ENST00000569288 GRIN3BO60391 1043 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 DALRD3Q5D0E6 543 aaKnown RBP11.44□□□□□ -0.58
LINC00555-201ENST00000569288 ZMYM1Q5SVZ6 1142 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 SP8Q8IXZ3 490 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 CCDC24Q8N4L8 307 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 RPGRQ92834 1020 aaKnown RBP11.44□□□□□ -0.58
LINC00555-201ENST00000569288 KIF2CQ99661 725 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 LSG1Q9H089 658 aaKnown RBP11.44□□□□□ -0.58
LINC00555-201ENST00000569288 DENND2AQ9ULE3 1009 aa11.44□□□□□ -0.58
LINC00555-201ENST00000569288 RPAP1Q9BWH6 1393 aaPredicted RBP11.43□□□□□ -0.58
LINC00555-201ENST00000569288 XDHP47989 1333 aa11.43□□□□□ -0.58
LINC00555-201ENST00000569288 DCAF8L1A6NGE4 600 aa11.43□□□□□ -0.58
LINC00555-201ENST00000569288 ATP2B4P23634 1241 aa11.43□□□□□ -0.58
LINC00555-201ENST00000569288 SOGA3Q5TF21 947 aa11.43□□□□□ -0.58
LINC00555-201ENST00000569288 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
LINC00555-201ENST00000569288 C7orf43Q8WVR3 580 aa11.43□□□□□ -0.58
LINC00555-201ENST00000569288 CELF1Q92879 486 aaKnown RBP11.43□□□□□ -0.58
LINC00555-201ENST00000569288 CCDC85AQ96PX6 553 aaPredicted RBP11.43□□□□□ -0.58
LINC00555-201ENST00000569288 DSCC1Q9BVC3 393 aa11.43□□□□□ -0.58
LINC00555-201ENST00000569288 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
LINC00555-201ENST00000569288 MED23Q9ULK4 1368 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 A0A1B0GUL6 1792 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 ST18O60284 1047 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 TAF5LO75529 589 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 ZKSCAN1P17029 563 aaPredicted RBP11.42□□□□□ -0.58
LINC00555-201ENST00000569288 NT5C2P49902 561 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 MAP3K12Q12852 859 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 KRT32Q14532 448 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 NECTIN1Q15223 517 aa11.42□□□□□ -0.58
LINC00555-201ENST00000569288 CWC27Q6UX04 472 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms