RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 CCDC42Q96M95 316 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 CCDC160A6NGH7 325 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 BRD1O95696 1058 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 C20orf194Q5TEA3 1177 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 SPTLC3Q9NUV7 552 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 MTUS1Q9ULD2 1270 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 IGHDP01880 384 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 APOBRQ0VD83 1088 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 PPP2R5AQ15172 486 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 ZNF569Q5MCW4 686 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 FBXO41Q8TF61 875 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 TCP11Q8WWU5 503 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 ZNF830Q96NB3 372 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 UBAC1Q9BSL1 405 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 TRIM35Q9UPQ4 493 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 TRIM21P19474 475 aaKnown RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 LMNB2Q03252 620 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 CSRNP2Q9H175 543 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 CNOT10Q9H9A5 744 aaKnown RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 TFIP11Q9UBB9 837 aaKnown RBP8.03□□□□□ -1.12
CNOT1-216ENST00000569240 C8orf74Q6P047 294 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 CARD6Q9BX69 1037 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 HOMER2Q9NSB8 354 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 HECW1Q76N89 1606 aa8.03□□□□□ -1.12
CNOT1-216ENST00000569240 CWC27Q6UX04 472 aaKnown RBP8.02□□□□□ -1.12
CNOT1-216ENST00000569240 PPP1R12CQ9BZL4 782 aa8.02□□□□□ -1.12
CNOT1-216ENST00000569240 DEUP1Q05D60 604 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 FAM210AQ96ND0 272 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 EID1Q9Y6B2 187 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 TTC21AQ8NDW8 1320 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 PSME1Q06323 249 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 CLEC17AQ6ZS10 378 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 NEUROD6Q96NK8 337 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 TM6SF1Q9BZW5 370 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 MIS12Q9H081 205 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC68Q9H2F9 335 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 CALCOCO2Q13137 446 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 LZICQ8WZA0 190 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 PDLIM2Q96JY6 352 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 EIF2AQ9BY44 585 aaKnown RBP8.02□□□□□ -1.13
CNOT1-216ENST00000569240 DCTPP1Q9H773 170 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 CNPY2Q9Y2B0 182 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC96Q2M329 555 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 TDRD7Q8NHU6 1098 aaKnown RBP8.02□□□□□ -1.13
CNOT1-216ENST00000569240 SKIP12755 728 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 RASEFQ8IZ41 740 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 TSNARE1Q96NA8 513 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 NEK1Q96PY6 1258 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 CTTNBP2NLQ9P2B4 639 aa8.02□□□□□ -1.13
CNOT1-216ENST00000569240 MACROD2A1Z1Q3 448 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 PFDN1O60925 122 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SAFB2Q14151 953 aaKnown RBP eCLIP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 TAF7Q15545 349 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 ALS2CLQ60I27 953 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 AACSQ86V21 672 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SPTLC2O15270 562 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 KCNJ6P48051 423 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 STK3Q13188 491 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 NBPF6Q5VWK0 638 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC62Q6P9F0 684 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 USP37Q86T82 979 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 NBPF5PQ86XG9 351 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 NBPF4Q96M43 638 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 USP26Q9BXU7 913 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SCOCQ9UIL1 159 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SSRP1Q08945 709 aaKnown RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 UBE4AQ14139 1066 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 HDGFL1Q5TGJ6 251 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 BCAS4Q8TDM0 211 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 MAIP1Q8WWC4 291 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 HAUS4Q9H6D7 363 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 ZNF215Q9UL58 517 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 TCP1P17987 556 aaKnown RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 GUCY2CP25092 1073 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 CCDC170Q8IYT3 715 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SPAG5Q96R06 1193 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 TCP11L1Q9NUJ3 509 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 IFNKQ9P0W0 207 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 ARHGEF12Q9NZN5 1544 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 TRIM37O94972 964 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 FOSBP53539 338 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 NAA16Q6N069 864 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 RUNDC3BQ96NL0 473 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 NOP53Q9NZM5 478 aaKnown RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 STX10O60499 249 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SMIM24O75264 130 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 CSB-PGBD3P0DP91 1061 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 RWDD2BP57060 319 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 PLEKHO1Q53GL0 409 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-216ENST00000569240 TRIML1Q8N9V2 468 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 SMC1BQ8NDV3 1235 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 TSC1Q92574 1164 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 ANKRD27Q96NW4 1050 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 RABEP2Q9H5N1 569 aa8.01□□□□□ -1.13
CNOT1-216ENST00000569240 ATP5HO75947 161 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 NMIQ13287 307 aaPredicted RBP8□□□□□ -1.13
CNOT1-216ENST00000569240 VSIG1Q86XK7 387 aa8□□□□□ -1.13
CNOT1-216ENST00000569240 LEO1Q8WVC0 666 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms