RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 NIM1KQ8IY84 436 aa20.62■□□□□ 0.89
CNEP1R1-210ENST00000568890 DDNO94850 711 aaPredicted RBP20.61■□□□□ 0.89
CNEP1R1-210ENST00000568890 CENPBP07199 599 aaPredicted RBP20.61■□□□□ 0.89
CNEP1R1-210ENST00000568890 PUM3Q15397 648 aaKnown RBP20.61■□□□□ 0.89
CNEP1R1-210ENST00000568890 RAD17O75943 681 aa20.61■□□□□ 0.89
CNEP1R1-210ENST00000568890 BCAMP50895 628 aa20.61■□□□□ 0.89
CNEP1R1-210ENST00000568890 CHD4Q14839 1912 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 APBB1O00213 710 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 HMMRO75330 724 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 ADORA1P30542 326 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 ATP2B3Q16720 1220 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 FBXO33Q7Z6M2 555 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 LPIN2Q92539 896 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 DCTPP1Q9H773 170 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 CD209Q9NNX6 404 aa20.6■□□□□ 0.89
CNEP1R1-210ENST00000568890 A0A1B0GUL7 405 aa20.59■□□□□ 0.89
CNEP1R1-210ENST00000568890 GLTPD2A6NH11 291 aa20.59■□□□□ 0.89
CNEP1R1-210ENST00000568890 IGHDP01880 384 aa20.59■□□□□ 0.89
CNEP1R1-210ENST00000568890 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
CNEP1R1-210ENST00000568890 A0A1B0GUL6 1792 aa20.58■□□□□ 0.89
CNEP1R1-210ENST00000568890 PODNQ7Z5L7 613 aa20.58■□□□□ 0.89
CNEP1R1-210ENST00000568890 ZNF526Q8TF50 670 aaPredicted RBP20.58■□□□□ 0.89
CNEP1R1-210ENST00000568890 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.89
CNEP1R1-210ENST00000568890 COA1Q9GZY4 146 aa20.58■□□□□ 0.89
CNEP1R1-210ENST00000568890 RHPN1Q8TCX5 695 aa20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 IL1RAPL2Q9NP60 686 aa20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 POTECB2RU33 542 aa20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 PSMD14O00487 310 aa20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 IL1R1P14778 569 aa20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 HIBADHP31937 336 aaKnown RBP20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 AAMPQ13685 434 aa20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 MXD3Q9BW11 206 aa20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 IQSEC3Q9UPP2 1182 aaPredicted RBP20.57■□□□□ 0.88
CNEP1R1-210ENST00000568890 DICER1Q9UPY3 1922 aaKnown RBP20.56■□□□□ 0.88
CNEP1R1-210ENST00000568890 ZC3H4Q9UPT8 1303 aaKnown RBP20.56■□□□□ 0.88
CNEP1R1-210ENST00000568890 TNNI3KQ59H18 835 aa20.56■□□□□ 0.88
CNEP1R1-210ENST00000568890 TDRD7Q8NHU6 1098 aaKnown RBP20.56■□□□□ 0.88
CNEP1R1-210ENST00000568890 XAGE2Q96GT9 111 aa20.56■□□□□ 0.88
CNEP1R1-210ENST00000568890 ZBTB12Q9Y330 459 aaPredicted RBP20.56■□□□□ 0.88
CNEP1R1-210ENST00000568890 FPGT-TNNI3KV9GXZ4 949 aa20.56■□□□□ 0.88
CNEP1R1-210ENST00000568890 G3V3G9 751 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 IFIT1P09914 478 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 EIF6P56537 245 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 HDAC1Q13547 482 aaPredicted RBP20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 DCAF8Q5TAQ9 597 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 ZNF784Q8NCA9 323 aaPredicted RBP20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 NEUROD6Q96NK8 337 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 JAG2Q9Y219 1238 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 SLC5A1P13866 664 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 PHKA1P46020 1223 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 DPY19L2Q6NUT2 758 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 TLR7Q9NYK1 1049 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 AKAP2Q9Y2D5 859 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 GJA3Q9Y6H8 435 aa20.55■□□□□ 0.88
CNEP1R1-210ENST00000568890 SCN9AQ15858 1988 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 SMARCA5O60264 1052 aaPredicted RBP20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 CIAPIN1Q6FI81 312 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 CCDC8Q9H0W5 538 aaPredicted RBP20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 GPR108Q9NPR9 543 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 VIL1P09327 827 aaKnown RBP20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 ZNF804AQ7Z570 1209 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 GPC2Q8N158 579 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 DBNDD2Q9BQY9 259 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 BCL11AQ9H165 835 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 NMRK2Q9NPI5 230 aa20.54■□□□□ 0.88
CNEP1R1-210ENST00000568890 SHTN1A0MZ66 631 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 RAB11FIP3O75154 756 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 GTF2IP78347 998 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 HSP90AB4PQ58FF6 505 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 CAVIN4Q5BKX8 364 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 CCDC102BQ68D86 513 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 TTLL5Q6EMB2 1281 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 DBNLQ9UJU6 430 aaKnown RBP20.53■□□□□ 0.88
CNEP1R1-210ENST00000568890 SCNN1DP51172 638 aa20.52■□□□□ 0.88
CNEP1R1-210ENST00000568890 DACT2Q5SW24 774 aa20.52■□□□□ 0.88
CNEP1R1-210ENST00000568890 USP17L3A6NCW0 530 aa20.52■□□□□ 0.87
CNEP1R1-210ENST00000568890 USP17L4A6NCW7 530 aa20.52■□□□□ 0.87
CNEP1R1-210ENST00000568890 USP17L1Q7RTZ2 530 aa20.52■□□□□ 0.87
CNEP1R1-210ENST00000568890 ERC1Q8IUD2 1116 aa20.52■□□□□ 0.87
CNEP1R1-210ENST00000568890 RRAGCQ9HB90 399 aa20.52■□□□□ 0.87
CNEP1R1-210ENST00000568890 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
CNEP1R1-210ENST00000568890 ZNF609O15014 1411 aa20.51■□□□□ 0.87
CNEP1R1-210ENST00000568890 VPS37DQ86XT2 251 aa20.51■□□□□ 0.87
CNEP1R1-210ENST00000568890 CERS5Q8N5B7 392 aa20.51■□□□□ 0.87
CNEP1R1-210ENST00000568890 GMLQ99445 158 aa20.51■□□□□ 0.87
CNEP1R1-210ENST00000568890 TNIP1Q15025 636 aa20.5■□□□□ 0.87
CNEP1R1-210ENST00000568890 STRIP1Q5VSL9 837 aa20.5■□□□□ 0.87
CNEP1R1-210ENST00000568890 L3MBTL3Q96JM7 780 aaPredicted RBP20.5■□□□□ 0.87
CNEP1R1-210ENST00000568890 EPS15P42566 896 aa20.5■□□□□ 0.87
CNEP1R1-210ENST00000568890 GMPSP49915 693 aaPredicted RBP20.5■□□□□ 0.87
CNEP1R1-210ENST00000568890 AACSQ86V21 672 aa20.5■□□□□ 0.87
CNEP1R1-210ENST00000568890 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
CNEP1R1-210ENST00000568890 SCARF1Q14162 830 aa20.49■□□□□ 0.87
CNEP1R1-210ENST00000568890 GRIK5Q16478 980 aa20.49■□□□□ 0.87
CNEP1R1-210ENST00000568890 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
CNEP1R1-210ENST00000568890 RSBN1LQ6PCB5 846 aaPredicted RBP20.48■□□□□ 0.87
CNEP1R1-210ENST00000568890 PI16Q6UXB8 463 aa20.48■□□□□ 0.87
CNEP1R1-210ENST00000568890 FBXW7Q969H0 707 aa20.48■□□□□ 0.87
CNEP1R1-210ENST00000568890 RWDD1Q9H446 243 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms