RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 MROH5Q6ZUA9 1318 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 IRS2Q9Y4H2 1338 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 TOMM70O94826 608 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
CNOT1-213ENST00000568158 SCNN1DP51172 638 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 ATP8B2P98198 1209 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.22■□□□□ 0.19
CNOT1-213ENST00000568158 TAF1DQ9H5J8 278 aaPredicted RBP16.22■□□□□ 0.19
CNOT1-213ENST00000568158 HACL1Q9UJ83 578 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 MED23Q9ULK4 1368 aa16.22■□□□□ 0.19
CNOT1-213ENST00000568158 SCN9AQ15858 1988 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 PDE8BO95263 885 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 POTEIP0CG38 1075 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 POTEJP0CG39 1038 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 MTX1Q13505 466 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 UBE4AQ14139 1066 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
CNOT1-213ENST00000568158 PODNQ7Z5L7 613 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 COA1Q9GZY4 146 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 COPRSQ9NQ92 184 aa16.21■□□□□ 0.19
CNOT1-213ENST00000568158 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
CNOT1-213ENST00000568158 IQCA1LA6NCM1 817 aa16.2■□□□□ 0.18
CNOT1-213ENST00000568158 VIL1P09327 827 aaKnown RBP16.2■□□□□ 0.18
CNOT1-213ENST00000568158 EPHX2P34913 555 aa16.2■□□□□ 0.18
CNOT1-213ENST00000568158 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
CNOT1-213ENST00000568158 C15orf52Q6ZUT6 534 aaKnown RBP16.2■□□□□ 0.18
CNOT1-213ENST00000568158 VGLL2Q8N8G2 317 aa16.2■□□□□ 0.18
CNOT1-213ENST00000568158 CD209Q9NNX6 404 aa16.2■□□□□ 0.18
CNOT1-213ENST00000568158 CNOT7Q9UIV1 285 aaKnown RBP16.2■□□□□ 0.18
CNOT1-213ENST00000568158 A0A1B0GUL6 1792 aa16.2■□□□□ 0.18
CNOT1-213ENST00000568158 USP17L3A6NCW0 530 aa16.19■□□□□ 0.18
CNOT1-213ENST00000568158 USP17L4A6NCW7 530 aa16.19■□□□□ 0.18
CNOT1-213ENST00000568158 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
CNOT1-213ENST00000568158 GYG1P46976 350 aa16.19■□□□□ 0.18
CNOT1-213ENST00000568158 USP17L1Q7RTZ2 530 aa16.19■□□□□ 0.18
CNOT1-213ENST00000568158 FBXW7Q969H0 707 aa16.19■□□□□ 0.18
CNOT1-213ENST00000568158 FAM84BQ96KN1 310 aaPredicted RBP16.19■□□□□ 0.18
CNOT1-213ENST00000568158 MXD3Q9BW11 206 aa16.19■□□□□ 0.18
CNOT1-213ENST00000568158 GPRC5DQ9NZD1 345 aa16.19■□□□□ 0.18
CNOT1-213ENST00000568158 SCN4AP35499 1836 aa16.18■□□□□ 0.18
CNOT1-213ENST00000568158 CIAO1O76071 339 aa16.18■□□□□ 0.18
CNOT1-213ENST00000568158 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
CNOT1-213ENST00000568158 RBM46Q8TBY0 533 aaKnown RBP16.18■□□□□ 0.18
CNOT1-213ENST00000568158 CEP126Q9P2H0 1117 aa16.18■□□□□ 0.18
CNOT1-213ENST00000568158 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
CNOT1-213ENST00000568158 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
CNOT1-213ENST00000568158 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
CNOT1-213ENST00000568158 FGFR2P21802 821 aa16.17■□□□□ 0.18
CNOT1-213ENST00000568158 DSG3P32926 999 aa16.17■□□□□ 0.18
CNOT1-213ENST00000568158 IL15P40933 162 aaPredicted RBP16.17■□□□□ 0.18
CNOT1-213ENST00000568158 GTF2IP78347 998 aa16.17■□□□□ 0.18
CNOT1-213ENST00000568158 POLA2Q14181 598 aa16.17■□□□□ 0.18
CNOT1-213ENST00000568158 TTLL5Q6EMB2 1281 aa16.17■□□□□ 0.18
CNOT1-213ENST00000568158 RSBN1LQ6PCB5 846 aaPredicted RBP16.17■□□□□ 0.18
CNOT1-213ENST00000568158 IL1R1P14778 569 aa16.16■□□□□ 0.18
CNOT1-213ENST00000568158 HIBADHP31937 336 aaKnown RBP16.16■□□□□ 0.18
CNOT1-213ENST00000568158 DACT2Q5SW24 774 aa16.16■□□□□ 0.18
CNOT1-213ENST00000568158 ZNF804AQ7Z570 1209 aa16.16■□□□□ 0.18
CNOT1-213ENST00000568158 FBXO33Q7Z6M2 555 aa16.16■□□□□ 0.18
CNOT1-213ENST00000568158 SSH3Q8TE77 659 aa16.16■□□□□ 0.18
CNOT1-213ENST00000568158 DPF2Q92785 391 aa16.16■□□□□ 0.18
CNOT1-213ENST00000568158 ZBTB40Q9NUA8 1239 aa16.16■□□□□ 0.18
CNOT1-213ENST00000568158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
CNOT1-213ENST00000568158 H7C1D1 291 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 BCAMP50895 628 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 HIRAP54198 1017 aaPredicted RBP16.15■□□□□ 0.18
CNOT1-213ENST00000568158 RRP1P56182 461 aaKnown RBP16.15■□□□□ 0.18
CNOT1-213ENST00000568158 TFCP2Q12800 502 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 G3BP1Q13283 466 aaKnown RBP eCLIP16.15■□□□□ 0.18
CNOT1-213ENST00000568158 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
CNOT1-213ENST00000568158 STRIP1Q5VSL9 837 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 CEP85Q6P2H3 762 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 SAMD7Q7Z3H4 446 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 TDRD7Q8NHU6 1098 aaKnown RBP16.15■□□□□ 0.18
CNOT1-213ENST00000568158 GMLQ99445 158 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 ADARB2Q9NS39 739 aaKnown RBP16.15■□□□□ 0.18
CNOT1-213ENST00000568158 IQSEC3Q9UPP2 1182 aaPredicted RBP16.15■□□□□ 0.18
CNOT1-213ENST00000568158 JAG2Q9Y219 1238 aa16.15■□□□□ 0.18
CNOT1-213ENST00000568158 SURF6O75683 361 aaKnown RBP16.14■□□□□ 0.17
CNOT1-213ENST00000568158 IFIT1P09914 478 aaKnown RBP16.14■□□□□ 0.17
CNOT1-213ENST00000568158 RPS12P25398 132 aaKnown RBP16.14■□□□□ 0.17
CNOT1-213ENST00000568158 TIMM10P62072 90 aa16.14■□□□□ 0.17
CNOT1-213ENST00000568158 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
CNOT1-213ENST00000568158 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
CNOT1-213ENST00000568158 PNMA8AQ86V59 439 aaPredicted RBP16.14■□□□□ 0.17
CNOT1-213ENST00000568158 SMC1BQ8NDV3 1235 aa16.14■□□□□ 0.17
CNOT1-213ENST00000568158 AGBL3Q8NEM8 1001 aa16.14■□□□□ 0.17
CNOT1-213ENST00000568158 SASH1O94885 1247 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 SLC5A1P13866 664 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 FSTL1Q12841 308 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 ATP2B3Q16720 1220 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 TBC1D10BQ4KMP7 808 aaPredicted RBP16.13■□□□□ 0.17
CNOT1-213ENST00000568158 CAVIN4Q5BKX8 364 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
CNOT1-213ENST00000568158 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 TRPM4Q8TD43 1214 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 LPIN2Q92539 896 aa16.13■□□□□ 0.17
CNOT1-213ENST00000568158 EGFRP00533 1210 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms