RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 USP17L4A6NCW7 530 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 ZBTB22O15209 634 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 IL1R1P14778 569 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 DACT2Q5SW24 774 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 STRIP1Q5VSL9 837 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 USP17L1Q7RTZ2 530 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 PUS3Q9BZE2 481 aaKnown RBP10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 FBXO3Q9UK99 471 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 ZBTB12Q9Y330 459 aaPredicted RBP10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 MROH5Q6ZUA9 1318 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 H7C1D1 291 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 TAF5LO75529 589 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 KLRK1P26718 216 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 FKBP1AP62942 108 aaKnown RBP10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 PTPN12Q05209 780 aaKnown RBP10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 MTX1Q13505 466 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 EAPPQ56P03 285 aaPredicted RBP10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 JMYQ8N9B5 988 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 CD209Q9NNX6 404 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
HDGFL3-205ENST00000568129 MYH13Q9UKX3 1938 aa10.27□□□□□ -0.76
HDGFL3-205ENST00000568129 SHTN1A0MZ66 631 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 SNAP23O00161 211 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 UBTFL1P0CB47 393 aaPredicted RBP10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 ZKSCAN2Q63HK3 967 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 MAP1SQ66K74 1059 aaPredicted RBP10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 HELBQ8NG08 1087 aaPredicted RBP10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 TRPM4Q8TD43 1214 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 KLRG1Q96E93 195 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 MEIS3Q99687 375 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 CNNM1Q9NRU3 951 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 MYO3BQ8WXR4 1341 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 ARAP2Q8WZ64 1704 aa10.27□□□□□ -0.77
HDGFL3-205ENST00000568129 TMEM88BA6NKF7 163 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 G3V3G9 751 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 CIAO1O76071 339 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 PDE8BO95263 885 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 EGFRP00533 1210 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 GNAI3P08754 354 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 FGFR2P21802 821 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 LRRC24Q50LG9 513 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 TAF7LQ5H9L4 462 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 DCAF8Q5TAQ9 597 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 TTLL5Q6EMB2 1281 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 ATG9AQ7Z3C6 839 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 FBXO33Q7Z6M2 555 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 FAM84BQ96KN1 310 aaPredicted RBP10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 COPRSQ9NQ92 184 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 CLEC11AQ9Y240 323 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
HDGFL3-205ENST00000568129 EYA2O00167 538 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 SASH1O94885 1247 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 USP17L8P0C7I0 530 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 HTRA3P83110 453 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 CST9Q5W186 159 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 CDC37L1Q7L3B6 337 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 ZBED3Q96IU2 234 aaPredicted RBP10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 LRRFIP2Q9Y608 721 aaKnown RBP10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 PCNTO95613 3336 aa10.25□□□□□ -0.77
HDGFL3-205ENST00000568129 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
HDGFL3-205ENST00000568129 KCNJ4P48050 445 aa10.24□□□□□ -0.77
HDGFL3-205ENST00000568129 ZNF804AQ7Z570 1209 aa10.24□□□□□ -0.77
HDGFL3-205ENST00000568129 TMEM57Q8N5G2 664 aa10.24□□□□□ -0.77
HDGFL3-205ENST00000568129 MTMR14Q8NCE2 650 aa10.24□□□□□ -0.77
HDGFL3-205ENST00000568129 KLHDC4Q8TBB5 520 aa10.24□□□□□ -0.77
HDGFL3-205ENST00000568129 PITPNM2Q9BZ72 1349 aa10.24□□□□□ -0.77
HDGFL3-205ENST00000568129 RASSF10A6NK89 507 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 RLBP1P12271 317 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 HIBADHP31937 336 aaKnown RBP10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 GTF2IP78347 998 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 KIF4BQ2VIQ3 1234 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 TBC1D10BQ4KMP7 808 aaPredicted RBP10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 CERS5Q8N5B7 392 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 HHIPL1Q96JK4 782 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 MYOZ2Q9NPC6 264 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 CNTNAP1P78357 1384 aa10.23□□□□□ -0.77
HDGFL3-205ENST00000568129 TRAF5O00463 557 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 WNT10BO00744 389 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 PLIN1O60240 522 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 GNAI2P04899 355 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 FMR1Q06787 632 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 METTL24Q5JXM2 366 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 DZIP1LQ8IYY4 767 aaKnown RBP10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 FRAT1Q92837 279 aaPredicted RBP10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 MXD3Q9BW11 206 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 MRIQ9BWK5 157 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 THSD7BQ9C0I4 1608 aa10.22□□□□□ -0.77
HDGFL3-205ENST00000568129 IL15P40933 162 aaPredicted RBP10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 GYG1P46976 350 aa10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 ATP8B2P98198 1209 aa10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 SCARF1Q14162 830 aa10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 POLA2Q14181 598 aa10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 PUM3Q15397 648 aaKnown RBP10.21□□□□□ -0.77
HDGFL3-205ENST00000568129 OGFOD1Q8N543 542 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms