RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RPS12P25398 132 aaKnown RBP6.08□□□□□ -1.44
CLK3-219ENST00000567805 IGHMBP2P38935 993 aaKnown RBP6.08□□□□□ -1.44
CLK3-219ENST00000567805 BEND3Q5T5X7 828 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 DCAF8Q5TAQ9 597 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 ZC3H15Q8WU90 426 aaKnown RBP6.08□□□□□ -1.44
CLK3-219ENST00000567805 DPF2Q92785 391 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 GPR101Q96P66 508 aaPredicted RBP6.08□□□□□ -1.44
CLK3-219ENST00000567805 SCUBE2Q9NQ36 999 aa6.08□□□□□ -1.44
CLK3-219ENST00000567805 CNOT7Q9UIV1 285 aaKnown RBP6.08□□□□□ -1.44
CLK3-219ENST00000567805 MED23Q9ULK4 1368 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 THSD7BQ9C0I4 1608 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 GRM8O00222 908 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 VIL1P09327 827 aaKnown RBP6.07□□□□□ -1.44
CLK3-219ENST00000567805 SLFN5Q08AF3 891 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 DOK7Q18PE1 504 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 FAM161AQ3B820 660 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 PODNQ7Z5L7 613 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 CDAN1Q8IWY9 1227 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 MICALL2Q8IY33 904 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 MPHOSPH8Q99549 860 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 MKRN1Q9UHC7 482 aaKnown RBP6.07□□□□□ -1.44
CLK3-219ENST00000567805 PGAP2Q9UHJ9 254 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 MINPP1Q9UNW1 487 aa6.07□□□□□ -1.44
CLK3-219ENST00000567805 ECM29Q5VYK3 1845 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 PTPRCP08575 1304 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 ANKRD18BA2A2Z9 1011 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 RASSF10A6NK89 507 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 VASPP50552 380 aaPredicted RBP6.06□□□□□ -1.44
CLK3-219ENST00000567805 CCT4P50991 539 aaKnown RBP6.06□□□□□ -1.44
CLK3-219ENST00000567805 HIRAP54198 1017 aaPredicted RBP6.06□□□□□ -1.44
CLK3-219ENST00000567805 FOXO4P98177 505 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 IFIT5Q13325 482 aaKnown RBP6.06□□□□□ -1.44
CLK3-219ENST00000567805 SLC4A10Q6U841 1118 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 MRPL50Q8N5N7 158 aaKnown RBP6.06□□□□□ -1.44
CLK3-219ENST00000567805 TRPM4Q8TD43 1214 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 SRCIN1Q9C0H9 1055 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 ANKRD2Q9GZV1 360 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 KCNQ5Q9NR82 932 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 C9orf78Q9NZ63 289 aaPredicted RBP6.06□□□□□ -1.44
CLK3-219ENST00000567805 LEMD3Q9Y2U8 911 aa6.06□□□□□ -1.44
CLK3-219ENST00000567805 ARAP2Q8WZ64 1704 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 ZNF804BA4D1E1 1349 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 UTYO14607 1347 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 SHTN1A0MZ66 631 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 USP17L3A6NCW0 530 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 USP17L4A6NCW7 530 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 TRAF5O00463 557 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 CT47B1P0C2W7 299 aaPredicted RBP6.05□□□□□ -1.44
CLK3-219ENST00000567805 HSPA1AP0DMV8 641 aaKnown RBP6.05□□□□□ -1.44
CLK3-219ENST00000567805 HSPA1BP0DMV9 641 aaKnown RBP6.05□□□□□ -1.44
CLK3-219ENST00000567805 VEGFBP49765 207 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 CHRNDQ07001 517 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 CCDC57Q2TAC2 916 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 DEFB115Q30KQ5 88 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 ALDH1L2Q3SY69 923 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 CST9Q5W186 159 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 RSBN1LQ6PCB5 846 aaPredicted RBP6.05□□□□□ -1.44
CLK3-219ENST00000567805 LMBR1LQ6UX01 489 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 CDC37L1Q7L3B6 337 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 USP17L1Q7RTZ2 530 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 SAMD7Q7Z3H4 446 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 IFNLR1Q8IU57 520 aaPredicted RBP6.05□□□□□ -1.44
CLK3-219ENST00000567805 TRMT2AQ8IZ69 625 aaKnown RBP6.05□□□□□ -1.44
CLK3-219ENST00000567805 AGBL3Q8NEM8 1001 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 SSH1Q8WYL5 1049 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 COA1Q9GZY4 146 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 ABT1Q9ULW3 272 aaKnown RBP6.05□□□□□ -1.44
CLK3-219ENST00000567805 TRPC6Q9Y210 931 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 CHMP3Q9Y3E7 222 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 MYH13Q9UKX3 1938 aa6.05□□□□□ -1.44
CLK3-219ENST00000567805 MYO3BQ8WXR4 1341 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 WDR33Q9C0J8 1336 aaKnown RBP6.04□□□□□ -1.44
CLK3-219ENST00000567805 WTIPA6NIX2 430 aaPredicted RBP6.04□□□□□ -1.44
CLK3-219ENST00000567805 CELF2O95319 508 aaKnown RBP6.04□□□□□ -1.44
CLK3-219ENST00000567805 EGFRP00533 1210 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 USP17L8P0C7I0 530 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 ECE1P42892 770 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 KCNJ4P48050 445 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 MMP14P50281 582 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 ZNF280AP59817 542 aaPredicted RBP6.04□□□□□ -1.44
CLK3-219ENST00000567805 FMR1Q06787 632 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLK3-219ENST00000567805 KIF4BQ2VIQ3 1234 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 TBC1D10BQ4KMP7 808 aaPredicted RBP6.04□□□□□ -1.44
CLK3-219ENST00000567805 TAF7LQ5H9L4 462 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 EPHA10Q5JZY3 1008 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 LDHAL6AQ6ZMR3 332 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 CDCA7LQ96GN5 454 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 HHIPL1Q96JK4 782 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 GMLQ99445 158 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 GLIS2Q9BZE0 524 aaPredicted RBP6.04□□□□□ -1.44
CLK3-219ENST00000567805 TSPYL2Q9H2G4 693 aaPredicted RBP6.04□□□□□ -1.44
CLK3-219ENST00000567805 TLL2Q9Y6L7 1015 aa6.04□□□□□ -1.44
CLK3-219ENST00000567805 PITPNM2Q9BZ72 1349 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 NBPF7P0C2Y1 421 aaPredicted RBP6.03□□□□□ -1.44
CLK3-219ENST00000567805 KLRK1P26718 216 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 PLCB2Q00722 1185 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 DACT2Q5SW24 774 aa6.03□□□□□ -1.44
CLK3-219ENST00000567805 RBM26Q5T8P6 1007 aaKnown RBP6.03□□□□□ -1.44
CLK3-219ENST00000567805 IFFO2Q5TF58 517 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms