RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 PTPRCP08575 1304 aa8.74□□□□□ -1.01
SF3B3-209ENST00000567635 TRAF5O00463 557 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 CT47B1P0C2W7 299 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-209ENST00000567635 KCNJ4P48050 445 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 CHRNDQ07001 517 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 CST9Q5W186 159 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 DIEXFQ68CQ4 756 aaKnown RBP8.73□□□□□ -1.01
SF3B3-209ENST00000567635 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-209ENST00000567635 LDHAL6AQ6ZMR3 332 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 TXNRD3Q86VQ6 643 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 MIER1Q8N108 512 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 HELBQ8NG08 1087 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-209ENST00000567635 GLIS2Q9BZE0 524 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-209ENST00000567635 COA1Q9GZY4 146 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 UTYO14607 1347 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 CNTNAP1P78357 1384 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
SF3B3-209ENST00000567635 RASSF10A6NK89 507 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 NBPF7P0C2Y1 421 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-209ENST00000567635 USP17L8P0C7I0 530 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 VEGFBP49765 207 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 STRIP1Q5VSL9 837 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 USP48Q86UV5 1035 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 DCPSQ96C86 337 aaKnown RBP8.72□□□□□ -1.01
SF3B3-209ENST00000567635 KAZALD1Q96I82 304 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 SUCLG2Q96I99 432 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 ZNF594Q96JF6 807 aaPredicted RBP8.72□□□□□ -1.01
SF3B3-209ENST00000567635 GMLQ99445 158 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 SMC4Q9NTJ3 1288 aa8.72□□□□□ -1.01
SF3B3-209ENST00000567635 A0A1B0GUL6 1792 aa8.71□□□□□ -1.01
SF3B3-209ENST00000567635 PLIN1O60240 522 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 TAF5LO75529 589 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 CELF2O95319 508 aaKnown RBP8.71□□□□□ -1.02
SF3B3-209ENST00000567635 EGFRP00533 1210 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 ZNF280AP59817 542 aaPredicted RBP8.71□□□□□ -1.02
SF3B3-209ENST00000567635 KIF4BQ2VIQ3 1234 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 TTLL5Q6EMB2 1281 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 C15orf52Q6ZUT6 534 aaKnown RBP8.71□□□□□ -1.02
SF3B3-209ENST00000567635 KRT26Q7Z3Y9 468 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 USP44Q9H0E7 712 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 CNNM1Q9NRU3 951 aa8.71□□□□□ -1.02
SF3B3-209ENST00000567635 NOB1Q9ULX3 412 aaKnown RBP8.71□□□□□ -1.02
SF3B3-209ENST00000567635 SNAP23O00161 211 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 HSPA1AP0DMV8 641 aaKnown RBP8.7□□□□□ -1.02
SF3B3-209ENST00000567635 HSPA1BP0DMV9 641 aaKnown RBP8.7□□□□□ -1.02
SF3B3-209ENST00000567635 KLRK1P26718 216 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 MMP14P50281 582 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 BRPF1P55201 1214 aaPredicted RBP8.7□□□□□ -1.02
SF3B3-209ENST00000567635 SCARF1Q14162 830 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 DACT2Q5SW24 774 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 BICC1Q9H694 974 aaKnown RBP8.7□□□□□ -1.02
SF3B3-209ENST00000567635 MYOZ2Q9NPC6 264 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
SF3B3-209ENST00000567635 ZNF646O15015 1829 aaPredicted RBP8.7□□□□□ -1.02
SF3B3-209ENST00000567635 ZNF609O15014 1411 aa8.7□□□□□ -1.02
SF3B3-209ENST00000567635 ECE1P42892 770 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 RARSP54136 660 aaKnown RBP8.69□□□□□ -1.02
SF3B3-209ENST00000567635 GTF2IP78347 998 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 RABL6Q3YEC7 729 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-209ENST00000567635 PAXIP1Q6ZW49 1069 aaPredicted RBP8.69□□□□□ -1.02
SF3B3-209ENST00000567635 ZNF804AQ7Z570 1209 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 SAPCD2Q86UD0 394 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 ANKRD44Q8N8A2 993 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 MXD3Q9BW11 206 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 PUS3Q9BZE2 481 aaKnown RBP8.69□□□□□ -1.02
SF3B3-209ENST00000567635 API5Q9BZZ5 524 aaKnown RBP8.69□□□□□ -1.02
SF3B3-209ENST00000567635 ZNF408Q9H9D4 720 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 CD209Q9NNX6 404 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 RIPOR2Q9Y4F9 1068 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 MYO3BQ8WXR4 1341 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 IRS2Q9Y4H2 1338 aa8.69□□□□□ -1.02
SF3B3-209ENST00000567635 IL1R1P14778 569 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 MAP2K1Q02750 393 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-209ENST00000567635 UBE4AQ14139 1066 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 DLK2Q6UY11 383 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 C2orf69Q8N8R5 385 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 ARHGAP45Q92619 1136 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 HHIPL1Q96JK4 782 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 CAPNS2Q96L46 248 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 WBP1LQ9NX94 342 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 GGA3Q9NZ52 723 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 HDAC5Q9UQL6 1122 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 ASTN2O75129 1339 aaPredicted RBP8.68□□□□□ -1.02
SF3B3-209ENST00000567635 MROH5Q6ZUA9 1318 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 PCNTO95613 3336 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 AKAP11Q9UKA4 1901 aa8.68□□□□□ -1.02
SF3B3-209ENST00000567635 ADM5C9JUS6 153 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 IPO8O15397 1037 aaKnown RBP8.67□□□□□ -1.02
SF3B3-209ENST00000567635 SASH1O94885 1247 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 UBTFL1P0CB47 393 aaPredicted RBP8.67□□□□□ -1.02
SF3B3-209ENST00000567635 MAP2K2P36507 400 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 GRM1Q13255 1194 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 NBPF9Q3BBW0 867 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 LRRC24Q50LG9 513 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 COL13A1Q5TAT6 717 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms