RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
CDH13-210ENST00000567445 TMC2Q8TDI7 906 aa11.86□□□□□ -0.51
CDH13-210ENST00000567445 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
CDH13-210ENST00000567445 PHAXQ9H814 394 aaKnown RBP11.86□□□□□ -0.51
CDH13-210ENST00000567445 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
CDH13-210ENST00000567445 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
CDH13-210ENST00000567445 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
CDH13-210ENST00000567445 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDH13-210ENST00000567445 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
CDH13-210ENST00000567445 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
CDH13-210ENST00000567445 AIDAQ96BJ3 306 aa11.85□□□□□ -0.51
CDH13-210ENST00000567445 BCL2L13Q9BXK5 485 aa11.85□□□□□ -0.51
CDH13-210ENST00000567445 WBP1LQ9NX94 342 aa11.85□□□□□ -0.51
CDH13-210ENST00000567445 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
CDH13-210ENST00000567445 TRAF5O00463 557 aa11.84□□□□□ -0.51
CDH13-210ENST00000567445 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
CDH13-210ENST00000567445 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
CDH13-210ENST00000567445 CST9Q5W186 159 aa11.84□□□□□ -0.51
CDH13-210ENST00000567445 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
CDH13-210ENST00000567445 MYD88Q99836 296 aa11.84□□□□□ -0.51
CDH13-210ENST00000567445 POLLQ9UGP5 575 aa11.84□□□□□ -0.51
CDH13-210ENST00000567445 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
CDH13-210ENST00000567445 C6orf229H3BNL8 230 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 CTCFP49711 727 aaPredicted RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 GPSM2P81274 684 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 ZC3H15Q8WU90 426 aaKnown RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 RYDENQ9NUL5 291 aaKnown RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 PGAP2Q9UHJ9 254 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 CNOT7Q9UIV1 285 aaKnown RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 COL4A1P02462 1669 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 H7C1D1 291 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 ECE1P42892 770 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 MAP2K1Q02750 393 aaPredicted RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 TBC1D16Q8TBP0 767 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 EYA3Q99504 573 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 DBNDD1Q9H9R9 158 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 CWC25Q9NXE8 425 aaPredicted RBP11.83□□□□□ -0.52
CDH13-210ENST00000567445 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
CDH13-210ENST00000567445 PSMD14O00487 310 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 PDE8AO60658 829 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 TSPYL6Q8N831 410 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 TRPM4Q8TD43 1214 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 DPF2Q92785 391 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 CAPNS2Q96L46 248 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 GLIS2Q9BZE0 524 aaPredicted RBP11.82□□□□□ -0.52
CDH13-210ENST00000567445 SEC31BQ9NQW1 1179 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 PODXL2Q9NZ53 605 aa11.82□□□□□ -0.52
CDH13-210ENST00000567445 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 ECE2O60344 883 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 CELF2O95319 508 aaKnown RBP11.81□□□□□ -0.52
CDH13-210ENST00000567445 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 CYP4F22Q6NT55 531 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 CDC37L1Q7L3B6 337 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 TSR2Q969E8 191 aaKnown RBP11.81□□□□□ -0.52
CDH13-210ENST00000567445 ANKIB1Q9P2G1 1089 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 MAP3K2Q9Y2U5 619 aa11.81□□□□□ -0.52
CDH13-210ENST00000567445 RPS12P25398 132 aaKnown RBP11.8□□□□□ -0.52
CDH13-210ENST00000567445 LBX1P52954 281 aa11.8□□□□□ -0.52
CDH13-210ENST00000567445 SAPCD2Q86UD0 394 aa11.8□□□□□ -0.52
CDH13-210ENST00000567445 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
CDH13-210ENST00000567445 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
CDH13-210ENST00000567445 GPR101Q96P66 508 aaPredicted RBP11.8□□□□□ -0.52
CDH13-210ENST00000567445 STK31Q9BXU1 1019 aa11.8□□□□□ -0.52
CDH13-210ENST00000567445 ZC3H12CQ9C0D7 883 aaKnown RBP11.8□□□□□ -0.52
CDH13-210ENST00000567445 RTL9Q8NET4 1388 aa11.8□□□□□ -0.52
CDH13-210ENST00000567445 THSD7BQ9C0I4 1608 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 PI4KAP2A4QPH2 592 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 UFL1O94874 794 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 GRM1Q13255 1194 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 PI4KAP1Q8N8J0 262 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 HHIPL1Q96JK4 782 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
CDH13-210ENST00000567445 IGKV5-2P06315 115 aa11.78□□□□□ -0.52
CDH13-210ENST00000567445 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
CDH13-210ENST00000567445 MAP2K2P36507 400 aa11.78□□□□□ -0.52
CDH13-210ENST00000567445 NEXNQ0ZGT2 675 aa11.78□□□□□ -0.52
CDH13-210ENST00000567445 TWISTNBQ3B726 338 aaPredicted RBP11.78□□□□□ -0.52
CDH13-210ENST00000567445 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
CDH13-210ENST00000567445 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
CDH13-210ENST00000567445 CCDC85AQ96PX6 553 aaPredicted RBP11.78□□□□□ -0.52
CDH13-210ENST00000567445 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
CDH13-210ENST00000567445 ZNF408Q9H9D4 720 aa11.78□□□□□ -0.52
CDH13-210ENST00000567445 IL16Q14005 1332 aa11.78□□□□□ -0.52
CDH13-210ENST00000567445 SCN9AQ15858 1988 aa11.77□□□□□ -0.52
CDH13-210ENST00000567445 EGFRP00533 1210 aa11.77□□□□□ -0.52
CDH13-210ENST00000567445 VIL1P09327 827 aaKnown RBP11.77□□□□□ -0.52
CDH13-210ENST00000567445 CTSWP56202 376 aa11.77□□□□□ -0.52
CDH13-210ENST00000567445 TBC1D10BQ4KMP7 808 aaPredicted RBP11.77□□□□□ -0.52
CDH13-210ENST00000567445 USP48Q86UV5 1035 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms