RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 COL4A5P29400 1685 aa25.1■■□□□ 1.61
RNF40-210ENST00000566811 TAF5LO75529 589 aa25.09■■□□□ 1.61
RNF40-210ENST00000566811 SIRT2Q8IXJ6 389 aa25.09■■□□□ 1.61
RNF40-210ENST00000566811 G3V3G9 751 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 IFIT1P09914 478 aaKnown RBP25.08■■□□□ 1.61
RNF40-210ENST00000566811 SLC5A1P13866 664 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 HTRA3P83110 453 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 DCAF8Q5TAQ9 597 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 ZNF804AQ7Z570 1209 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 HELBQ8NG08 1087 aaPredicted RBP25.08■■□□□ 1.61
RNF40-210ENST00000566811 COA1Q9GZY4 146 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 GPR108Q9NPR9 543 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 ZNRF3Q9ULT6 936 aa25.08■■□□□ 1.61
RNF40-210ENST00000566811 ZNF609O15014 1411 aa25.07■■□□□ 1.6
RNF40-210ENST00000566811 FZD9O00144 591 aa25.07■■□□□ 1.6
RNF40-210ENST00000566811 RAB11FIP3O75154 756 aa25.07■■□□□ 1.6
RNF40-210ENST00000566811 FGFR2P21802 821 aa25.07■■□□□ 1.6
RNF40-210ENST00000566811 PODNQ7Z5L7 613 aa25.07■■□□□ 1.6
RNF40-210ENST00000566811 IRS2Q9Y4H2 1338 aa25.07■■□□□ 1.6
RNF40-210ENST00000566811 WDR90Q96KV7 1748 aa25.06■■□□□ 1.6
RNF40-210ENST00000566811 EIF6P56537 245 aaKnown RBP25.06■■□□□ 1.6
RNF40-210ENST00000566811 ATP2B3Q16720 1220 aa25.06■■□□□ 1.6
RNF40-210ENST00000566811 C16orf71Q8IYS4 520 aaPredicted RBP25.06■■□□□ 1.6
RNF40-210ENST00000566811 EXOC6Q8TAG9 804 aa25.06■■□□□ 1.6
RNF40-210ENST00000566811 HDAC1Q13547 482 aaPredicted RBP25.05■■□□□ 1.6
RNF40-210ENST00000566811 CAVIN4Q5BKX8 364 aa25.05■■□□□ 1.6
RNF40-210ENST00000566811 DPY19L2Q6NUT2 758 aa25.05■■□□□ 1.6
RNF40-210ENST00000566811 SCN9AQ15858 1988 aa25.04■■□□□ 1.6
RNF40-210ENST00000566811 RIMBP2O15034 1052 aa25.04■■□□□ 1.6
RNF40-210ENST00000566811 ECE2O60344 883 aa25.04■■□□□ 1.6
RNF40-210ENST00000566811 KIF1BPQ96EK5 621 aa25.04■■□□□ 1.6
RNF40-210ENST00000566811 RRAGCQ9HB90 399 aa25.04■■□□□ 1.6
RNF40-210ENST00000566811 PCDHB15Q9Y5E8 787 aa25.04■■□□□ 1.6
RNF40-210ENST00000566811 ZNF646O15015 1829 aaPredicted RBP25.04■■□□□ 1.6
RNF40-210ENST00000566811 SCN4AP35499 1836 aa25.03■■□□□ 1.6
RNF40-210ENST00000566811 ZBTB22O15209 634 aa25.03■■□□□ 1.6
RNF40-210ENST00000566811 NEFLP07196 543 aa25.03■■□□□ 1.6
RNF40-210ENST00000566811 TFCP2Q12800 502 aa25.03■■□□□ 1.6
RNF40-210ENST00000566811 FSTL1Q12841 308 aa25.03■■□□□ 1.6
RNF40-210ENST00000566811 KDM2BQ8NHM5 1336 aa25.03■■□□□ 1.6
RNF40-210ENST00000566811 SASH1O94885 1247 aa25.02■■□□□ 1.6
RNF40-210ENST00000566811 TNIP1Q15025 636 aa25.02■■□□□ 1.6
RNF40-210ENST00000566811 KLRG1Q96E93 195 aa25.02■■□□□ 1.6
RNF40-210ENST00000566811 GPR101Q96P66 508 aaPredicted RBP25.02■■□□□ 1.6
RNF40-210ENST00000566811 EXOC6BQ9Y2D4 811 aa25.02■■□□□ 1.6
RNF40-210ENST00000566811 VPS37DQ86XT2 251 aa25.01■■□□□ 1.59
RNF40-210ENST00000566811 GPC2Q8N158 579 aa25.01■■□□□ 1.59
RNF40-210ENST00000566811 DCTPP1Q9H773 170 aa25.01■■□□□ 1.59
RNF40-210ENST00000566811 DBNDD1Q9H9R9 158 aa25.01■■□□□ 1.59
RNF40-210ENST00000566811 A0A1B0GUL7 405 aa25■■□□□ 1.59
RNF40-210ENST00000566811 GLTPD2A6NH11 291 aa25■■□□□ 1.59
RNF40-210ENST00000566811 IL1R1P14778 569 aa25■■□□□ 1.59
RNF40-210ENST00000566811 HIBADHP31937 336 aaKnown RBP25■■□□□ 1.59
RNF40-210ENST00000566811 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
RNF40-210ENST00000566811 KLRK1P26718 216 aa24.99■■□□□ 1.59
RNF40-210ENST00000566811 TXNRD3Q86VQ6 643 aa24.99■■□□□ 1.59
RNF40-210ENST00000566811 RHPN1Q8TCX5 695 aa24.99■■□□□ 1.59
RNF40-210ENST00000566811 GCC1Q96CN9 775 aa24.99■■□□□ 1.59
RNF40-210ENST00000566811 CD209Q9NNX6 404 aa24.99■■□□□ 1.59
RNF40-210ENST00000566811 WTIPA6NIX2 430 aaPredicted RBP24.98■■□□□ 1.59
RNF40-210ENST00000566811 SNAP23O00161 211 aa24.98■■□□□ 1.59
RNF40-210ENST00000566811 DOK7Q18PE1 504 aa24.98■■□□□ 1.59
RNF40-210ENST00000566811 TNNI3KQ59H18 835 aa24.98■■□□□ 1.59
RNF40-210ENST00000566811 CIAPIN1Q6FI81 312 aa24.98■■□□□ 1.59
RNF40-210ENST00000566811 CLASRPQ8N2M8 674 aaKnown RBP24.98■■□□□ 1.59
RNF40-210ENST00000566811 JMYQ8N9B5 988 aa24.98■■□□□ 1.59
RNF40-210ENST00000566811 FAM84BQ96KN1 310 aaPredicted RBP24.98■■□□□ 1.59
RNF40-210ENST00000566811 LRRCC1Q9C099 1032 aa24.98■■□□□ 1.59
RNF40-210ENST00000566811 GNL3LQ9NVN8 582 aaKnown RBP24.98■■□□□ 1.59
RNF40-210ENST00000566811 FPGT-TNNI3KV9GXZ4 949 aa24.98■■□□□ 1.59
RNF40-210ENST00000566811 MYO3BQ8WXR4 1341 aa24.97■■□□□ 1.59
RNF40-210ENST00000566811 ZNF541Q9H0D2 1346 aa24.97■■□□□ 1.59
RNF40-210ENST00000566811 YDJCA8MPS7 323 aa24.97■■□□□ 1.59
RNF40-210ENST00000566811 SEMA3EO15041 775 aa24.97■■□□□ 1.59
RNF40-210ENST00000566811 IRX6P78412 446 aaPredicted RBP24.97■■□□□ 1.59
RNF40-210ENST00000566811 FBXO33Q7Z6M2 555 aa24.97■■□□□ 1.59
RNF40-210ENST00000566811 RPS12P25398 132 aaKnown RBP24.96■■□□□ 1.59
RNF40-210ENST00000566811 STRIP1Q5VSL9 837 aa24.96■■□□□ 1.59
RNF40-210ENST00000566811 L3MBTL3Q96JM7 780 aaPredicted RBP24.96■■□□□ 1.59
RNF40-210ENST00000566811 USP17L3A6NCW0 530 aa24.95■■□□□ 1.58
RNF40-210ENST00000566811 USP17L4A6NCW7 530 aa24.95■■□□□ 1.58
RNF40-210ENST00000566811 GYG1P46976 350 aa24.95■■□□□ 1.58
RNF40-210ENST00000566811 MMP14P50281 582 aa24.95■■□□□ 1.58
RNF40-210ENST00000566811 CXCL9Q07325 125 aa24.95■■□□□ 1.58
RNF40-210ENST00000566811 USP17L1Q7RTZ2 530 aa24.95■■□□□ 1.58
RNF40-210ENST00000566811 PDS5AQ29RF7 1337 aaKnown RBP24.94■■□□□ 1.58
RNF40-210ENST00000566811 FKBP1AP62942 108 aaKnown RBP24.94■■□□□ 1.58
RNF40-210ENST00000566811 TDRD7Q8NHU6 1098 aaKnown RBP24.94■■□□□ 1.58
RNF40-210ENST00000566811 XAGE2Q96GT9 111 aa24.94■■□□□ 1.58
RNF40-210ENST00000566811 FAM205AQ6ZU69 1335 aa24.93■■□□□ 1.58
RNF40-210ENST00000566811 GORABQ5T7V8 394 aa24.93■■□□□ 1.58
RNF40-210ENST00000566811 COL13A1Q5TAT6 717 aaPredicted RBP24.93■■□□□ 1.58
RNF40-210ENST00000566811 NEUROD6Q96NK8 337 aa24.93■■□□□ 1.58
RNF40-210ENST00000566811 IQCA1LA6NCM1 817 aa24.92■■□□□ 1.58
RNF40-210ENST00000566811 FRAT2O75474 233 aaPredicted RBP24.92■■□□□ 1.58
RNF40-210ENST00000566811 RAD17O75943 681 aa24.92■■□□□ 1.58
RNF40-210ENST00000566811 VIL1P09327 827 aaKnown RBP24.92■■□□□ 1.58
RNF40-210ENST00000566811 TIMM10P62072 90 aa24.92■■□□□ 1.58
RNF40-210ENST00000566811 ERICH6BQ5W0A0 696 aa24.92■■□□□ 1.58
RNF40-210ENST00000566811 SMC1BQ8NDV3 1235 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms