RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.15■■□□□ 1.14
MSLN-207ENST00000566549 NUTM2BA6NNL0 878 aaPredicted RBP22.15■■□□□ 1.14
MSLN-207ENST00000566549 NUTM2EB1AL46 878 aaPredicted RBP22.15■■□□□ 1.14
MSLN-207ENST00000566549 MCAMP43121 646 aa22.15■■□□□ 1.14
MSLN-207ENST00000566549 NUTM2AQ8IVF1 878 aaPredicted RBP22.15■■□□□ 1.14
MSLN-207ENST00000566549 PUS7LQ9H0K6 701 aaKnown RBP22.15■■□□□ 1.14
MSLN-207ENST00000566549 LRP6O75581 1613 aa22.14■■□□□ 1.13
MSLN-207ENST00000566549 HMGB1P09429 215 aaKnown RBP22.14■■□□□ 1.13
MSLN-207ENST00000566549 DDB1Q16531 1140 aa22.14■■□□□ 1.13
MSLN-207ENST00000566549 HELBQ8NG08 1087 aaPredicted RBP22.14■■□□□ 1.13
MSLN-207ENST00000566549 COL16A1Q07092 1604 aaPredicted RBP22.14■■□□□ 1.13
MSLN-207ENST00000566549 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
MSLN-207ENST00000566549 HCLS1P14317 486 aaPredicted RBP22.13■■□□□ 1.13
MSLN-207ENST00000566549 GIMAP6Q6P9H5 292 aa22.13■■□□□ 1.13
MSLN-207ENST00000566549 NCOA5Q9HCD5 579 aaKnown RBP22.13■■□□□ 1.13
MSLN-207ENST00000566549 FOXP2O15409 715 aa22.12■■□□□ 1.13
MSLN-207ENST00000566549 H3BQV1 296 aa22.12■■□□□ 1.13
MSLN-207ENST00000566549 PDE8AO60658 829 aa22.12■■□□□ 1.13
MSLN-207ENST00000566549 ATP6V1AP38606 617 aa22.12■■□□□ 1.13
MSLN-207ENST00000566549 IFFO2Q5TF58 517 aa22.12■■□□□ 1.13
MSLN-207ENST00000566549 FAM184AQ8NB25 1140 aa22.12■■□□□ 1.13
MSLN-207ENST00000566549 PDLIM2Q96JY6 352 aa22.12■■□□□ 1.13
MSLN-207ENST00000566549 EXOSC10Q01780 885 aaKnown RBP22.11■■□□□ 1.13
MSLN-207ENST00000566549 LRRFIP1Q32MZ4 808 aaKnown RBP22.11■■□□□ 1.13
MSLN-207ENST00000566549 GPHNQ9NQX3 736 aaPredicted RBP22.11■■□□□ 1.13
MSLN-207ENST00000566549 ERVV-1B6SEH8 477 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 PFKFB2O60825 505 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 VGLL2Q8N8G2 317 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 SPATA31A1Q5TZJ5 1347 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 SNAP23O00161 211 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 FGAP02671 866 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 ZFYP08048 801 aaPredicted RBP22.1■■□□□ 1.13
MSLN-207ENST00000566549 ZNF34Q8IZ26 560 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 APPBP2Q92624 585 aa22.1■■□□□ 1.13
MSLN-207ENST00000566549 PDE8BO95263 885 aa22.09■■□□□ 1.13
MSLN-207ENST00000566549 CRKLP46109 303 aaKnown RBP22.09■■□□□ 1.13
MSLN-207ENST00000566549 SUSD4Q5VX71 490 aa22.09■■□□□ 1.13
MSLN-207ENST00000566549 INTS5Q6P9B9 1019 aaKnown RBP22.09■■□□□ 1.13
MSLN-207ENST00000566549 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
MSLN-207ENST00000566549 NSUN7Q8NE18 718 aaKnown RBP22.09■■□□□ 1.13
MSLN-207ENST00000566549 SPATA32Q96LK8 384 aa22.09■■□□□ 1.13
MSLN-207ENST00000566549 GPAA1O43292 621 aa22.09■■□□□ 1.13
MSLN-207ENST00000566549 IDH1O75874 414 aaKnown RBP22.09■■□□□ 1.13
MSLN-207ENST00000566549 PDIA4P13667 645 aaKnown RBP22.09■■□□□ 1.13
MSLN-207ENST00000566549 PHKA1P46020 1223 aa22.09■■□□□ 1.13
MSLN-207ENST00000566549 PTPDC1A2A3K4 754 aa22.08■■□□□ 1.13
MSLN-207ENST00000566549 CTDNEP1O95476 244 aa22.08■■□□□ 1.13
MSLN-207ENST00000566549 IMMTQ16891 758 aaKnown RBP22.08■■□□□ 1.13
MSLN-207ENST00000566549 SLC9C2Q5TAH2 1124 aa22.08■■□□□ 1.13
MSLN-207ENST00000566549 TICAM2Q86XR7 235 aa22.08■■□□□ 1.13
MSLN-207ENST00000566549 CCDC87Q9NVE4 849 aa22.08■■□□□ 1.13
MSLN-207ENST00000566549 EIF5P55010 431 aaKnown RBP22.08■■□□□ 1.12
MSLN-207ENST00000566549 ZSCAN30Q86W11 494 aa22.08■■□□□ 1.12
MSLN-207ENST00000566549 LIG1P18858 919 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 CCDC102BQ68D86 513 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 PIH1D3Q9NQM4 214 aaKnown RBP22.07■■□□□ 1.12
MSLN-207ENST00000566549 DOT1LQ8TEK3 1739 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 LOC102724428A0A0B4J2F2 783 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 SIK1P57059 783 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 CAMK4Q16566 473 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 SMARCC2Q8TAQ2 1214 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 SEC31BQ9NQW1 1179 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 CTNNA3Q9UI47 895 aa22.07■■□□□ 1.12
MSLN-207ENST00000566549 SLIT2O94813 1529 aa22.06■■□□□ 1.12
MSLN-207ENST00000566549 GOLGA6L4A6NEF3 574 aa22.06■■□□□ 1.12
MSLN-207ENST00000566549 LETM1O95202 739 aaPredicted RBP22.06■■□□□ 1.12
MSLN-207ENST00000566549 PDIA3P30101 505 aaKnown RBP22.06■■□□□ 1.12
MSLN-207ENST00000566549 CEBPZQ03701 1054 aaKnown RBP22.06■■□□□ 1.12
MSLN-207ENST00000566549 RESTQ13127 1097 aa22.06■■□□□ 1.12
MSLN-207ENST00000566549 ITPK1Q13572 414 aa22.06■■□□□ 1.12
MSLN-207ENST00000566549 RAB11FIP4Q86YS3 637 aa22.06■■□□□ 1.12
MSLN-207ENST00000566549 AGXT2Q9BYV1 514 aa22.06■■□□□ 1.12
MSLN-207ENST00000566549 LEO1Q8WVC0 666 aaPredicted RBP22.06■■□□□ 1.12
MSLN-207ENST00000566549 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.06■■□□□ 1.12
MSLN-207ENST00000566549 SPEF2Q9C093 1822 aa22.05■■□□□ 1.12
MSLN-207ENST00000566549 AHDC1Q5TGY3 1603 aaPredicted RBP22.05■■□□□ 1.12
MSLN-207ENST00000566549 MSNP26038 577 aaKnown RBP22.05■■□□□ 1.12
MSLN-207ENST00000566549 GUCY1B3Q02153 619 aa22.05■■□□□ 1.12
MSLN-207ENST00000566549 SCAND2PQ9GZW5 306 aaPredicted RBP22.05■■□□□ 1.12
MSLN-207ENST00000566549 PLCH1Q4KWH8 1693 aa22.05■■□□□ 1.12
MSLN-207ENST00000566549 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
MSLN-207ENST00000566549 KCNQ2O43526 872 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 ADD2P35612 726 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 PIP4K2BP78356 416 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 LLPHQ9BRT6 129 aaKnown RBP22.04■■□□□ 1.12
MSLN-207ENST00000566549 USP25Q9UHP3 1055 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 ELP1O95163 1332 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 APPP05067 770 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 PUM3Q15397 648 aaKnown RBP22.04■■□□□ 1.12
MSLN-207ENST00000566549 MPNDQ8N594 471 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 MPHOSPH8Q99549 860 aa22.04■■□□□ 1.12
MSLN-207ENST00000566549 CDCA7Q9BWT1 371 aaPredicted RBP22.04■■□□□ 1.12
MSLN-207ENST00000566549 ZNF213O14771 459 aa22.03■■□□□ 1.12
MSLN-207ENST00000566549 PRC1O43663 620 aa22.03■■□□□ 1.12
MSLN-207ENST00000566549 UTP14AQ9BVJ6 771 aaKnown RBP22.03■■□□□ 1.12
MSLN-207ENST00000566549 FTOQ9C0B1 505 aaKnown RBP eCLIP22.03■■□□□ 1.12
MSLN-207ENST00000566549 WWC3Q9ULE0 1092 aa22.03■■□□□ 1.12
MSLN-207ENST00000566549 LAMA4Q16363 1823 aa22.03■■□□□ 1.12
MSLN-207ENST00000566549 COL22A1Q8NFW1 1626 aaPredicted RBP22.03■■□□□ 1.12
MSLN-207ENST00000566549 DACT1Q9NYF0 836 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms