RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
CNEP1R1-208ENST00000566482 COA1Q9GZY4 146 aa16.11■□□□□ 0.17
CNEP1R1-208ENST00000566482 MROH5Q6ZUA9 1318 aa16.11■□□□□ 0.17
CNEP1R1-208ENST00000566482 ADAMTSL1Q8N6G6 1762 aa16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 ADARB2Q9NS39 739 aaKnown RBP16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 PSME4Q14997 1843 aa16.1■□□□□ 0.17
CNEP1R1-208ENST00000566482 SHTN1A0MZ66 631 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 GNAI2P04899 355 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 RPS12P25398 132 aaKnown RBP16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 UBE4AQ14139 1066 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 PANK1Q8TE04 598 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 DPF2Q92785 391 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 CNOT7Q9UIV1 285 aaKnown RBP16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
CNEP1R1-208ENST00000566482 EYA2O00167 538 aa16.08■□□□□ 0.16
CNEP1R1-208ENST00000566482 RSBN1LQ6PCB5 846 aaPredicted RBP16.08■□□□□ 0.16
CNEP1R1-208ENST00000566482 USP50Q70EL3 339 aaPredicted RBP16.08■□□□□ 0.16
CNEP1R1-208ENST00000566482 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
CNEP1R1-208ENST00000566482 VGLL2Q8N8G2 317 aa16.08■□□□□ 0.16
CNEP1R1-208ENST00000566482 SIL1Q9H173 461 aa16.08■□□□□ 0.16
CNEP1R1-208ENST00000566482 ZNF609O15014 1411 aa16.08■□□□□ 0.16
CNEP1R1-208ENST00000566482 H7C1D1 291 aa16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 MTX1Q13505 466 aa16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 ZNF804AQ7Z570 1209 aa16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 TRPM4Q8TD43 1214 aa16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 FBXW7Q969H0 707 aa16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 CD209Q9NNX6 404 aa16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 PA2G4Q9UQ80 394 aaKnown RBP16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 ZNF646O15015 1829 aaPredicted RBP16.07■□□□□ 0.16
CNEP1R1-208ENST00000566482 SRGAP3O43295 1099 aa16.06■□□□□ 0.16
CNEP1R1-208ENST00000566482 PDE8BO95263 885 aa16.06■□□□□ 0.16
CNEP1R1-208ENST00000566482 DACT2Q5SW24 774 aa16.06■□□□□ 0.16
CNEP1R1-208ENST00000566482 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
CNEP1R1-208ENST00000566482 GMLQ99445 158 aa16.06■□□□□ 0.16
CNEP1R1-208ENST00000566482 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 CIAO1O76071 339 aa16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 MS4A1P11836 297 aa16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 STRIP1Q5VSL9 837 aa16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 MAP1SQ66K74 1059 aaPredicted RBP16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 MXD3Q9BW11 206 aa16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
CNEP1R1-208ENST00000566482 IL1R1P14778 569 aa16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 GYG1P46976 350 aa16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 APLP1P51693 650 aa16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 HIRAP54198 1017 aaPredicted RBP16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 GTF2IP78347 998 aa16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 PUM3Q15397 648 aaKnown RBP16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 TBC1D10BQ4KMP7 808 aaPredicted RBP16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 SAMD7Q7Z3H4 446 aa16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 FAM84BQ96KN1 310 aaPredicted RBP16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
CNEP1R1-208ENST00000566482 PNMA6EA0A0J9YXQ4 647 aa16.03■□□□□ 0.16
CNEP1R1-208ENST00000566482 EGFRP00533 1210 aa16.03■□□□□ 0.16
CNEP1R1-208ENST00000566482 FGFR2P21802 821 aa16.03■□□□□ 0.16
CNEP1R1-208ENST00000566482 HIBADHP31937 336 aaKnown RBP16.03■□□□□ 0.16
CNEP1R1-208ENST00000566482 ZNF280AP59817 542 aaPredicted RBP16.03■□□□□ 0.16
CNEP1R1-208ENST00000566482 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
CNEP1R1-208ENST00000566482 MYO3BQ8WXR4 1341 aa16.02■□□□□ 0.16
CNEP1R1-208ENST00000566482 ITGBL1O95965 494 aaPredicted RBP16.02■□□□□ 0.16
CNEP1R1-208ENST00000566482 IL15P40933 162 aaPredicted RBP16.02■□□□□ 0.16
CNEP1R1-208ENST00000566482 KIF4BQ2VIQ3 1234 aa16.02■□□□□ 0.16
CNEP1R1-208ENST00000566482 RBM26Q5T8P6 1007 aaKnown RBP16.02■□□□□ 0.16
CNEP1R1-208ENST00000566482 FBXO33Q7Z6M2 555 aa16.02■□□□□ 0.16
CNEP1R1-208ENST00000566482 CEP126Q9P2H0 1117 aa16.02■□□□□ 0.16
CNEP1R1-208ENST00000566482 PASKQ96RG2 1323 aa16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 IFIT1P09914 478 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 USP17L8P0C7I0 530 aa16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 SLC5A1P13866 664 aa16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 HTRA3P83110 453 aa16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 MVPQ14764 893 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 ZC3H15Q8WU90 426 aaKnown RBP16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 PGAP2Q9UHJ9 254 aa16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 COG6Q9Y2V7 657 aa16.01■□□□□ 0.15
CNEP1R1-208ENST00000566482 ATP8B2P98198 1209 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 POLA2Q14181 598 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 ATP2B3Q16720 1220 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 CAVIN4Q5BKX8 364 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 C20orf194Q5TEA3 1177 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 VPS37DQ86XT2 251 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 CERS5Q8N5B7 392 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 LPIN2Q92539 896 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 JAG2Q9Y219 1238 aa16■□□□□ 0.15
CNEP1R1-208ENST00000566482 SASH1O94885 1247 aa15.99■□□□□ 0.15
CNEP1R1-208ENST00000566482 BCAMP50895 628 aa15.99■□□□□ 0.15
CNEP1R1-208ENST00000566482 KIAA0825Q8IV33 1275 aa15.99■□□□□ 0.15
CNEP1R1-208ENST00000566482 SSH3Q8TE77 659 aa15.99■□□□□ 0.15
CNEP1R1-208ENST00000566482 MYOZ2Q9NPC6 264 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms