RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 YDJCA8MPS7 323 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 ATP2B4P23634 1241 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 TIMM10P62072 90 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 NUCB1Q02818 461 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 KIAA2012Q0VF49 1180 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 G3BP1Q13283 466 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMPD3-207ENST00000566466 UBE4AQ14139 1066 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 PUM3Q15397 648 aaKnown RBP11.41□□□□□ -0.58
SMPD3-207ENST00000566466 ATP2B3Q16720 1220 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 DPP8Q6V1X1 898 aaPredicted RBP11.41□□□□□ -0.58
SMPD3-207ENST00000566466 C16orf71Q8IYS4 520 aaPredicted RBP11.41□□□□□ -0.58
SMPD3-207ENST00000566466 KIF1BPQ96EK5 621 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 FAM84BQ96KN1 310 aaPredicted RBP11.41□□□□□ -0.58
SMPD3-207ENST00000566466 DBNDD2Q9BQY9 259 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 ANKRD2Q9GZV1 360 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 RWDD1Q9H446 243 aaPredicted RBP11.41□□□□□ -0.58
SMPD3-207ENST00000566466 ZNF277Q9NRM2 450 aaPredicted RBP11.41□□□□□ -0.58
SMPD3-207ENST00000566466 PPP4R2Q9NY27 417 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 GGA1Q9UJY5 639 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
SMPD3-207ENST00000566466 SBF1O95248 1867 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 APBB1O00213 710 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 AOC3Q16853 763 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 SOGA3Q5TF21 947 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 FBXO33Q7Z6M2 555 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 RTKN2Q8IZC4 609 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 LPIN2Q92539 896 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 GCC1Q96CN9 775 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 LRRCC1Q9C099 1032 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 ANKIB1Q9P2G1 1089 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 CEP126Q9P2H0 1117 aa11.4□□□□□ -0.58
SMPD3-207ENST00000566466 CHD4Q14839 1912 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 PHKA1P46020 1223 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 GYG1P46976 350 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 BCAMP50895 628 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 SCARF1Q14162 830 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 HSP90AB4PQ58FF6 505 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 ERC1Q8IUD2 1116 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 TIAM2Q8IVF5 1701 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 XAGE2Q96GT9 111 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 CCDC8Q9H0W5 538 aaPredicted RBP11.39□□□□□ -0.59
SMPD3-207ENST00000566466 KCNQ5Q9NR82 932 aa11.39□□□□□ -0.59
SMPD3-207ENST00000566466 IARSP41252 1262 aaKnown RBP11.38□□□□□ -0.59
SMPD3-207ENST00000566466 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
SMPD3-207ENST00000566466 CENPQQ7L2Z9 268 aaPredicted RBP11.38□□□□□ -0.59
SMPD3-207ENST00000566466 CHD1LQ86WJ1 897 aa11.38□□□□□ -0.59
SMPD3-207ENST00000566466 GTF3C3Q9Y5Q9 886 aa11.38□□□□□ -0.59
SMPD3-207ENST00000566466 AKAP11Q9UKA4 1901 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 C6orf229H3BNL8 230 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 IL1R1P14778 569 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 ARID4AP29374 1257 aaPredicted RBP11.37□□□□□ -0.59
SMPD3-207ENST00000566466 OS9Q13438 667 aaPredicted RBP11.37□□□□□ -0.59
SMPD3-207ENST00000566466 ANKRD45Q5TZF3 282 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 TSHZ3Q63HK5 1081 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 CCDC102BQ68D86 513 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 PI16Q6UXB8 463 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 AACSQ86V21 672 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 PELP1Q8IZL8 1130 aaKnown RBP11.37□□□□□ -0.59
SMPD3-207ENST00000566466 TDRD7Q8NHU6 1098 aaKnown RBP11.37□□□□□ -0.59
SMPD3-207ENST00000566466 PI4K2BQ8TCG2 481 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 LNPKQ9C0E8 428 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 CD209Q9NNX6 404 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 PSME4Q14997 1843 aa11.37□□□□□ -0.59
SMPD3-207ENST00000566466 ZNF541Q9H0D2 1346 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 FZD9O00144 591 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 SLC5A1P13866 664 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 MCAMP43121 646 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 GPR162Q16538 588 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 DOK7Q18PE1 504 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 WASHC4Q2M389 1173 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 CCDC136Q96JN2 1154 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 ZNF512BQ96KM6 892 aaPredicted RBP11.36□□□□□ -0.59
SMPD3-207ENST00000566466 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 DBNDD1Q9H9R9 158 aa11.36□□□□□ -0.59
SMPD3-207ENST00000566466 DICER1Q9UPY3 1922 aaKnown RBP11.36□□□□□ -0.59
SMPD3-207ENST00000566466 ECE2O60344 883 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 IFIT1P09914 478 aaKnown RBP11.35□□□□□ -0.59
SMPD3-207ENST00000566466 LMNB1P20700 586 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 GRIK5Q16478 980 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 CERS5Q8N5B7 392 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 SUPT20HQ8NEM7 779 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 COA1Q9GZY4 146 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 STAP2Q9UGK3 403 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 IQSEC3Q9UPP2 1182 aaPredicted RBP11.35□□□□□ -0.59
SMPD3-207ENST00000566466 AKAP2Q9Y2D5 859 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 NDUFB9Q9Y6M9 179 aa11.35□□□□□ -0.59
SMPD3-207ENST00000566466 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
SMPD3-207ENST00000566466 GRIN3BO60391 1043 aa11.34□□□□□ -0.59
SMPD3-207ENST00000566466 HIBADHP31937 336 aaKnown RBP11.34□□□□□ -0.59
SMPD3-207ENST00000566466 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
SMPD3-207ENST00000566466 CLASRPQ8N2M8 674 aaKnown RBP11.34□□□□□ -0.59
SMPD3-207ENST00000566466 ZNF384Q8TF68 577 aa11.34□□□□□ -0.59
SMPD3-207ENST00000566466 EYA3Q99504 573 aa11.34□□□□□ -0.59
SMPD3-207ENST00000566466 MXD3Q9BW11 206 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms