RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 ZNF609O15014 1411 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 RAD50Q92878 1312 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 GTF2E1P29083 439 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-210ENST00000566290 AACSQ86V21 672 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 LDHDQ86WU2 507 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 EVI5LQ96CN4 794 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 MASTLQ96GX5 879 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 NYXQ9GZU5 481 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 SNRKQ9NRH2 765 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 SLX4Q8IY92 1834 aa20.38■□□□□ 0.85
RAB40C-210ENST00000566290 HSP90B1P14625 803 aaKnown RBP20.37■□□□□ 0.85
RAB40C-210ENST00000566290 PARP10Q53GL7 1025 aa20.37■□□□□ 0.85
RAB40C-210ENST00000566290 STYK1Q6J9G0 422 aa20.37■□□□□ 0.85
RAB40C-210ENST00000566290 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
RAB40C-210ENST00000566290 RTL9Q8NET4 1388 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 EYA2O00167 538 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 ATP5JP18859 108 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 TNNI3KQ59H18 835 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 HSCBQ8IWL3 235 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 TAF1DQ9H5J8 278 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-210ENST00000566290 FPGT-TNNI3KV9GXZ4 949 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 FER1L6Q2WGJ9 1857 aa20.36■□□□□ 0.85
RAB40C-210ENST00000566290 SGSM2O43147 1006 aa20.35■□□□□ 0.85
RAB40C-210ENST00000566290 DEFB115Q30KQ5 88 aa20.35■□□□□ 0.85
RAB40C-210ENST00000566290 TSHZ3Q63HK5 1081 aa20.35■□□□□ 0.85
RAB40C-210ENST00000566290 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
RAB40C-210ENST00000566290 ATG9AQ7Z3C6 839 aa20.35■□□□□ 0.85
RAB40C-210ENST00000566290 SLC51AQ86UW1 340 aa20.35■□□□□ 0.85
RAB40C-210ENST00000566290 RUFY2Q8WXA3 655 aa20.35■□□□□ 0.85
RAB40C-210ENST00000566290 UTP14AQ9BVJ6 771 aaKnown RBP20.35■□□□□ 0.85
RAB40C-210ENST00000566290 RASSF10A6NK89 507 aa20.34■□□□□ 0.85
RAB40C-210ENST00000566290 NPR1P16066 1061 aa20.34■□□□□ 0.85
RAB40C-210ENST00000566290 MCCP23508 829 aa20.34■□□□□ 0.85
RAB40C-210ENST00000566290 CRY2Q49AN0 593 aa20.34■□□□□ 0.85
RAB40C-210ENST00000566290 OLFM4Q6UX06 510 aa20.34■□□□□ 0.85
RAB40C-210ENST00000566290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.34■□□□□ 0.85
RAB40C-210ENST00000566290 CNKSR1Q969H4 720 aa20.34■□□□□ 0.85
RAB40C-210ENST00000566290 WDR33Q9C0J8 1336 aaKnown RBP20.33■□□□□ 0.85
RAB40C-210ENST00000566290 MAP2K1Q02750 393 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-210ENST00000566290 C7orf43Q8WVR3 580 aa20.33■□□□□ 0.85
RAB40C-210ENST00000566290 RILPL2Q969X0 211 aa20.33■□□□□ 0.85
RAB40C-210ENST00000566290 ANTXR1Q9H6X2 564 aa20.33■□□□□ 0.85
RAB40C-210ENST00000566290 RIC1Q4ADV7 1423 aa20.33■□□□□ 0.84
RAB40C-210ENST00000566290 DDX60Q8IY21 1712 aaKnown RBP20.33■□□□□ 0.84
RAB40C-210ENST00000566290 ARAP2Q8WZ64 1704 aa20.33■□□□□ 0.84
RAB40C-210ENST00000566290 IQCA1LA6NCM1 817 aa20.32■□□□□ 0.84
RAB40C-210ENST00000566290 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-210ENST00000566290 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
RAB40C-210ENST00000566290 SIL1Q9H173 461 aa20.32■□□□□ 0.84
RAB40C-210ENST00000566290 TAOK3Q9H2K8 898 aa20.32■□□□□ 0.84
RAB40C-210ENST00000566290 PDE8AO60658 829 aa20.31■□□□□ 0.84
RAB40C-210ENST00000566290 TFCP2Q12800 502 aa20.31■□□□□ 0.84
RAB40C-210ENST00000566290 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
RAB40C-210ENST00000566290 EAPPQ56P03 285 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-210ENST00000566290 KLHDC4Q8TBB5 520 aa20.31■□□□□ 0.84
RAB40C-210ENST00000566290 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
RAB40C-210ENST00000566290 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
RAB40C-210ENST00000566290 DBNLQ9UJU6 430 aaKnown RBP20.31■□□□□ 0.84
RAB40C-210ENST00000566290 LTBP3Q9NS15 1303 aa20.3■□□□□ 0.84
RAB40C-210ENST00000566290 CTSWP56202 376 aa20.3■□□□□ 0.84
RAB40C-210ENST00000566290 CLEC11AQ9Y240 323 aa20.3■□□□□ 0.84
RAB40C-210ENST00000566290 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
RAB40C-210ENST00000566290 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
RAB40C-210ENST00000566290 CIZ1Q9ULV3 898 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-210ENST00000566290 AKAP2Q9Y2D5 859 aa20.29■□□□□ 0.84
RAB40C-210ENST00000566290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-210ENST00000566290 SCN4AP35499 1836 aa20.29■□□□□ 0.84
RAB40C-210ENST00000566290 SH3TC1Q8TE82 1336 aa20.28■□□□□ 0.84
RAB40C-210ENST00000566290 K7ELQ4 463 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-210ENST00000566290 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-210ENST00000566290 MCM2P49736 904 aa20.28■□□□□ 0.84
RAB40C-210ENST00000566290 IFIT5Q13325 482 aaKnown RBP20.28■□□□□ 0.84
RAB40C-210ENST00000566290 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-210ENST00000566290 MAP1SQ66K74 1059 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-210ENST00000566290 MED23Q9ULK4 1368 aa20.27■□□□□ 0.84
RAB40C-210ENST00000566290 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-210ENST00000566290 HSPA4P34932 840 aa20.27■□□□□ 0.84
RAB40C-210ENST00000566290 DDIT3P35638 169 aa20.27■□□□□ 0.84
RAB40C-210ENST00000566290 SLC4A3P48751 1232 aa20.27■□□□□ 0.84
RAB40C-210ENST00000566290 JARID2Q92833 1246 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-210ENST00000566290 NLRP3Q96P20 1036 aa20.27■□□□□ 0.84
RAB40C-210ENST00000566290 HAUS7Q99871 368 aa20.27■□□□□ 0.84
RAB40C-210ENST00000566290 CCDC8Q9H0W5 538 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-210ENST00000566290 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
RAB40C-210ENST00000566290 TLR7Q9NYK1 1049 aaKnown RBP20.27■□□□□ 0.84
RAB40C-210ENST00000566290 PDE4DIPQ5VU43 2346 aa20.26■□□□□ 0.83
RAB40C-210ENST00000566290 ST18O60284 1047 aa20.26■□□□□ 0.83
RAB40C-210ENST00000566290 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
RAB40C-210ENST00000566290 RPGRQ92834 1020 aaKnown RBP20.26■□□□□ 0.83
RAB40C-210ENST00000566290 KCNB2Q92953 911 aa20.26■□□□□ 0.83
RAB40C-210ENST00000566290 ABT1Q9ULW3 272 aaKnown RBP20.26■□□□□ 0.83
RAB40C-210ENST00000566290 SNED1Q8TER0 1413 aa20.26■□□□□ 0.83
RAB40C-210ENST00000566290 ZNF512BQ96KM6 892 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-210ENST00000566290 LSG1Q9H089 658 aaKnown RBP20.25■□□□□ 0.83
RAB40C-210ENST00000566290 ANO2Q9NQ90 1003 aa20.25■□□□□ 0.83
RAB40C-210ENST00000566290 CEP126Q9P2H0 1117 aa20.25■□□□□ 0.83
RAB40C-210ENST00000566290 TSKSQ9UJT2 592 aa20.25■□□□□ 0.83
RAB40C-210ENST00000566290 CHMP3Q9Y3E7 222 aa20.25■□□□□ 0.83
RAB40C-210ENST00000566290 ZNF541Q9H0D2 1346 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms