RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 RFX5P48382 616 aaPredicted RBP22.58■■□□□ 1.21
TRADD-205ENST00000566247 CHADLQ6NUI6 762 aa22.58■■□□□ 1.21
TRADD-205ENST00000566247 LDHDQ86WU2 507 aa22.58■■□□□ 1.21
TRADD-205ENST00000566247 RPS12P25398 132 aaKnown RBP22.57■■□□□ 1.2
TRADD-205ENST00000566247 PTPN12Q05209 780 aaKnown RBP22.57■■□□□ 1.2
TRADD-205ENST00000566247 ZNF804AQ7Z570 1209 aa22.57■■□□□ 1.2
TRADD-205ENST00000566247 PANK1Q8TE04 598 aa22.57■■□□□ 1.2
TRADD-205ENST00000566247 ADARB2Q9NS39 739 aaKnown RBP22.57■■□□□ 1.2
TRADD-205ENST00000566247 A0A1B0GUL6 1792 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 USP17L3A6NCW0 530 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 USP17L4A6NCW7 530 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 H7C1D1 291 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 EYA2O00167 538 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 SRGAP3O43295 1099 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 VIL1P09327 827 aaKnown RBP22.56■■□□□ 1.2
TRADD-205ENST00000566247 UBE4AQ14139 1066 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 C15orf52Q6ZUT6 534 aaKnown RBP22.56■■□□□ 1.2
TRADD-205ENST00000566247 USP17L1Q7RTZ2 530 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 SIL1Q9H173 461 aa22.56■■□□□ 1.2
TRADD-205ENST00000566247 CNOT7Q9UIV1 285 aaKnown RBP22.56■■□□□ 1.2
TRADD-205ENST00000566247 HSPA6P17066 643 aa22.55■■□□□ 1.2
TRADD-205ENST00000566247 USP50Q70EL3 339 aaPredicted RBP22.55■■□□□ 1.2
TRADD-205ENST00000566247 MICALL2Q8IY33 904 aa22.55■■□□□ 1.2
TRADD-205ENST00000566247 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.55■■□□□ 1.2
TRADD-205ENST00000566247 DPF2Q92785 391 aa22.55■■□□□ 1.2
TRADD-205ENST00000566247 RSBN1LQ6PCB5 846 aaPredicted RBP22.54■■□□□ 1.2
TRADD-205ENST00000566247 CD209Q9NNX6 404 aa22.54■■□□□ 1.2
TRADD-205ENST00000566247 FBXO3Q9UK99 471 aa22.54■■□□□ 1.2
TRADD-205ENST00000566247 PDE8BO95263 885 aa22.53■■□□□ 1.2
TRADD-205ENST00000566247 MTX1Q13505 466 aa22.53■■□□□ 1.2
TRADD-205ENST00000566247 PA2G4Q9UQ80 394 aaKnown RBP22.53■■□□□ 1.2
TRADD-205ENST00000566247 IRS2Q9Y4H2 1338 aa22.53■■□□□ 1.2
TRADD-205ENST00000566247 SCN9AQ15858 1988 aa22.52■■□□□ 1.2
TRADD-205ENST00000566247 CIAO1O76071 339 aa22.52■■□□□ 1.2
TRADD-205ENST00000566247 AGBL3Q8NEM8 1001 aa22.52■■□□□ 1.2
TRADD-205ENST00000566247 SHTN1A0MZ66 631 aa22.51■■□□□ 1.19
TRADD-205ENST00000566247 ZBTB7BO15156 539 aaPredicted RBP22.51■■□□□ 1.19
TRADD-205ENST00000566247 GTF2IP78347 998 aa22.51■■□□□ 1.19
TRADD-205ENST00000566247 PUM3Q15397 648 aaKnown RBP22.51■■□□□ 1.19
TRADD-205ENST00000566247 STRIP1Q5VSL9 837 aa22.51■■□□□ 1.19
TRADD-205ENST00000566247 ATG9AQ7Z3C6 839 aa22.51■■□□□ 1.19
TRADD-205ENST00000566247 VGLL2Q8N8G2 317 aa22.51■■□□□ 1.19
TRADD-205ENST00000566247 C1orf115Q9H7X2 142 aa22.51■■□□□ 1.19
TRADD-205ENST00000566247 COPRSQ9NQ92 184 aa22.51■■□□□ 1.19
TRADD-205ENST00000566247 IFIT1P09914 478 aaKnown RBP22.5■■□□□ 1.19
TRADD-205ENST00000566247 HIBADHP31937 336 aaKnown RBP22.5■■□□□ 1.19
TRADD-205ENST00000566247 IL15P40933 162 aaPredicted RBP22.5■■□□□ 1.19
TRADD-205ENST00000566247 GYG1P46976 350 aa22.5■■□□□ 1.19
TRADD-205ENST00000566247 DACT2Q5SW24 774 aa22.5■■□□□ 1.19
TRADD-205ENST00000566247 TTLL5Q6EMB2 1281 aa22.5■■□□□ 1.19
TRADD-205ENST00000566247 VPS37DQ86XT2 251 aa22.5■■□□□ 1.19
TRADD-205ENST00000566247 CEP126Q9P2H0 1117 aa22.5■■□□□ 1.19
TRADD-205ENST00000566247 MYO3BQ8WXR4 1341 aa22.5■■□□□ 1.19
TRADD-205ENST00000566247 APLP1P51693 650 aa22.49■■□□□ 1.19
TRADD-205ENST00000566247 MVPQ14764 893 aaKnown RBP22.49■■□□□ 1.19
TRADD-205ENST00000566247 CAVIN4Q5BKX8 364 aa22.49■■□□□ 1.19
TRADD-205ENST00000566247 MAP1SQ66K74 1059 aaPredicted RBP22.49■■□□□ 1.19
TRADD-205ENST00000566247 TRPM4Q8TD43 1214 aa22.49■■□□□ 1.19
TRADD-205ENST00000566247 COG6Q9Y2V7 657 aa22.49■■□□□ 1.19
TRADD-205ENST00000566247 ZNF609O15014 1411 aa22.48■■□□□ 1.19
TRADD-205ENST00000566247 SLC5A1P13866 664 aa22.48■■□□□ 1.19
TRADD-205ENST00000566247 IL1R1P14778 569 aa22.48■■□□□ 1.19
TRADD-205ENST00000566247 TBC1D10BQ4KMP7 808 aaPredicted RBP22.48■■□□□ 1.19
TRADD-205ENST00000566247 RBM26Q5T8P6 1007 aaKnown RBP22.48■■□□□ 1.19
TRADD-205ENST00000566247 SAMD7Q7Z3H4 446 aa22.48■■□□□ 1.19
TRADD-205ENST00000566247 MXD3Q9BW11 206 aa22.48■■□□□ 1.19
TRADD-205ENST00000566247 ADAMTSL1Q8N6G6 1762 aa22.48■■□□□ 1.19
TRADD-205ENST00000566247 PNMA6EA0A0J9YXQ4 647 aa22.47■■□□□ 1.19
TRADD-205ENST00000566247 USP17L8P0C7I0 530 aa22.47■■□□□ 1.19
TRADD-205ENST00000566247 CNTROBQ8N137 903 aa22.47■■□□□ 1.19
TRADD-205ENST00000566247 FAM84BQ96KN1 310 aaPredicted RBP22.47■■□□□ 1.19
TRADD-205ENST00000566247 DDX19BQ9UMR2 479 aa22.47■■□□□ 1.19
TRADD-205ENST00000566247 PSME4Q14997 1843 aa22.47■■□□□ 1.19
TRADD-205ENST00000566247 ATP2B3Q16720 1220 aa22.46■■□□□ 1.19
TRADD-205ENST00000566247 KIF4BQ2VIQ3 1234 aa22.46■■□□□ 1.19
TRADD-205ENST00000566247 OGFOD1Q8N543 542 aa22.46■■□□□ 1.19
TRADD-205ENST00000566247 LPIN2Q92539 896 aa22.46■■□□□ 1.19
TRADD-205ENST00000566247 GMLQ99445 158 aa22.46■■□□□ 1.19
TRADD-205ENST00000566247 FRAT2O75474 233 aaPredicted RBP22.45■■□□□ 1.18
TRADD-205ENST00000566247 FGFR2P21802 821 aa22.45■■□□□ 1.18
TRADD-205ENST00000566247 ATP8B2P98198 1209 aa22.45■■□□□ 1.18
TRADD-205ENST00000566247 PDE3AQ14432 1141 aa22.45■■□□□ 1.18
TRADD-205ENST00000566247 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
TRADD-205ENST00000566247 JAG2Q9Y219 1238 aa22.45■■□□□ 1.18
TRADD-205ENST00000566247 HIRAP54198 1017 aaPredicted RBP22.44■■□□□ 1.18
TRADD-205ENST00000566247 ZNF280AP59817 542 aaPredicted RBP22.44■■□□□ 1.18
TRADD-205ENST00000566247 G3BP1Q13283 466 aaKnown RBP eCLIP22.44■■□□□ 1.18
TRADD-205ENST00000566247 TDRD7Q8NHU6 1098 aaKnown RBP22.44■■□□□ 1.18
TRADD-205ENST00000566247 ZC3H15Q8WU90 426 aaKnown RBP22.44■■□□□ 1.18
TRADD-205ENST00000566247 SASH1O94885 1247 aa22.43■■□□□ 1.18
TRADD-205ENST00000566247 EGFRP00533 1210 aa22.43■■□□□ 1.18
TRADD-205ENST00000566247 OS9Q13438 667 aaPredicted RBP22.43■■□□□ 1.18
TRADD-205ENST00000566247 FBXO33Q7Z6M2 555 aa22.43■■□□□ 1.18
TRADD-205ENST00000566247 KIAA0825Q8IV33 1275 aa22.43■■□□□ 1.18
TRADD-205ENST00000566247 MYOZ2Q9NPC6 264 aa22.43■■□□□ 1.18
TRADD-205ENST00000566247 HDAC9Q9UKV0 1011 aa22.43■■□□□ 1.18
TRADD-205ENST00000566247 IQSEC3Q9UPP2 1182 aaPredicted RBP22.43■■□□□ 1.18
TRADD-205ENST00000566247 ITGBL1O95965 494 aaPredicted RBP22.42■■□□□ 1.18
TRADD-205ENST00000566247 BCAMP50895 628 aa22.42■■□□□ 1.18
TRADD-205ENST00000566247 POLA2Q14181 598 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms