RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-207ENST00000566095 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-207ENST00000566095 RTKN2Q8IZC4 609 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 MPNDQ8N594 471 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 RUFY2Q8WXA3 655 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 DBNDD2Q9BQY9 259 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 PIM2Q9P1W9 311 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 NSFL1CQ9UNZ2 370 aaKnown RBP11.92□□□□□ -0.5
SF3B3-207ENST00000566095 SPEF2Q9C093 1822 aa11.92□□□□□ -0.5
SF3B3-207ENST00000566095 KIF13BQ9NQT8 1826 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 G3V3G9 751 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 FRAT2O75474 233 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 UFL1O94874 794 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 CCDC93Q567U6 631 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 C15orf52Q6ZUT6 534 aaKnown RBP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 ZGPATQ8N5A5 531 aaKnown RBP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 PDGFDQ9GZP0 370 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
SF3B3-207ENST00000566095 DENND2AQ9ULE3 1009 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 ARAP2Q8WZ64 1704 aa11.91□□□□□ -0.5
SF3B3-207ENST00000566095 PDS5AQ29RF7 1337 aaKnown RBP11.9□□□□□ -0.5
SF3B3-207ENST00000566095 TAF5LO75529 589 aa11.9□□□□□ -0.5
SF3B3-207ENST00000566095 ARID4AP29374 1257 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-207ENST00000566095 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.5
SF3B3-207ENST00000566095 CCDC102BQ68D86 513 aa11.9□□□□□ -0.5
SF3B3-207ENST00000566095 PI4K2BQ8TCG2 481 aa11.9□□□□□ -0.5
SF3B3-207ENST00000566095 OTUD7AQ8TE49 926 aaPredicted RBP11.9□□□□□ -0.5
SF3B3-207ENST00000566095 HAUS7Q99871 368 aa11.9□□□□□ -0.5
SF3B3-207ENST00000566095 VPS33BQ9H267 617 aa11.9□□□□□ -0.5
SF3B3-207ENST00000566095 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
SF3B3-207ENST00000566095 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.51
SF3B3-207ENST00000566095 C6orf229H3BNL8 230 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 REC8O95072 547 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 ZFYP08048 801 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 MFAP1P55081 439 aaKnown RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 DALRD3Q5D0E6 543 aaKnown RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 TBC1D32Q96NH3 1257 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 DNAJC2Q99543 621 aaKnown RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 FSD1Q9BTV5 496 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 ZC3H12CQ9C0D7 883 aaKnown RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 PAG1Q9NWQ8 432 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 LRRC37AA6NMS7 1700 aa11.89□□□□□ -0.51
SF3B3-207ENST00000566095 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
SF3B3-207ENST00000566095 DPEP1P16444 411 aa11.88□□□□□ -0.51
SF3B3-207ENST00000566095 SDSP20132 328 aa11.88□□□□□ -0.51
SF3B3-207ENST00000566095 CHRNA5P30532 468 aa11.88□□□□□ -0.51
SF3B3-207ENST00000566095 GPSM2P81274 684 aa11.88□□□□□ -0.51
SF3B3-207ENST00000566095 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
SF3B3-207ENST00000566095 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
SF3B3-207ENST00000566095 IPO9Q96P70 1041 aaKnown RBP11.88□□□□□ -0.51
SF3B3-207ENST00000566095 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
SF3B3-207ENST00000566095 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
SF3B3-207ENST00000566095 RAD50Q92878 1312 aa11.87□□□□□ -0.51
SF3B3-207ENST00000566095 GSPT1P15170 499 aaKnown RBP11.87□□□□□ -0.51
SF3B3-207ENST00000566095 FKBP4Q02790 459 aaKnown RBP eCLIP11.87□□□□□ -0.51
SF3B3-207ENST00000566095 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
SF3B3-207ENST00000566095 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
SF3B3-207ENST00000566095 TBC1D16Q8TBP0 767 aa11.87□□□□□ -0.51
SF3B3-207ENST00000566095 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
SF3B3-207ENST00000566095 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
SF3B3-207ENST00000566095 A0A0G2JLW4 131 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 ADORA1P30542 326 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 PTGER2P43116 358 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 TSHZ3Q63HK5 1081 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 FBXO33Q7Z6M2 555 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 SKAP1Q86WV1 359 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 KBTBD3Q8NAB2 608 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 WDR66Q8TBY9 1149 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 TBC1D22AQ8WUA7 517 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 PSMD1Q99460 953 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 RTFDC1Q9BY42 306 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-207ENST00000566095 A0A1B0GUL6 1792 aa11.86□□□□□ -0.51
SF3B3-207ENST00000566095 GOLIM4O00461 696 aa11.85□□□□□ -0.51
SF3B3-207ENST00000566095 PHKA1P46020 1223 aa11.85□□□□□ -0.51
SF3B3-207ENST00000566095 TBC1D9Q6ZT07 1266 aa11.85□□□□□ -0.51
SF3B3-207ENST00000566095 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
SF3B3-207ENST00000566095 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
SF3B3-207ENST00000566095 FAM84BQ96KN1 310 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-207ENST00000566095 AK9Q5TCS8 1911 aa11.85□□□□□ -0.51
SF3B3-207ENST00000566095 MCCP23508 829 aa11.84□□□□□ -0.51
SF3B3-207ENST00000566095 GYG1P46976 350 aa11.84□□□□□ -0.51
SF3B3-207ENST00000566095 BCAMP50895 628 aa11.84□□□□□ -0.51
SF3B3-207ENST00000566095 CERS3Q8IU89 383 aa11.84□□□□□ -0.51
SF3B3-207ENST00000566095 SNRKQ9NRH2 765 aa11.84□□□□□ -0.51
SF3B3-207ENST00000566095 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
SF3B3-207ENST00000566095 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
SF3B3-207ENST00000566095 TAF1P21675 1872 aa11.84□□□□□ -0.51
SF3B3-207ENST00000566095 C21orf2O43822 256 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 IL1R1P14778 569 aa11.83□□□□□ -0.52
SF3B3-207ENST00000566095 MCAMP43121 646 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms