RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
NSMCE1-211ENST00000566087 NSFL1CQ9UNZ2 370 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-211ENST00000566087 F6X3S4 739 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 GRM8O00222 908 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 KIF23Q02241 960 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 RGMBQ6NW40 437 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 KRT26Q7Z3Y9 468 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 TTLL11Q8NHH1 800 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 CELF1Q92879 486 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 API5Q9BZZ5 524 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 GBA2Q9HCG7 927 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 ANKIB1Q9P2G1 1089 aa13.45□□□□□ -0.26
NSMCE1-211ENST00000566087 G3V3G9 751 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 C6orf229H3BNL8 230 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 TRPA1O75762 1119 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 ZNF157P51786 506 aaPredicted RBP13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 GPSM2P81274 684 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 MPHOSPH8Q99549 860 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 POLLQ9UGP5 575 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
NSMCE1-211ENST00000566087 ASTN2O75129 1339 aaPredicted RBP13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 KIF16BQ96L93 1317 aa13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 C2orf69Q8N8R5 385 aa13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 DPF2Q92785 391 aa13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 ZC3H12CQ9C0D7 883 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
NSMCE1-211ENST00000566087 ANKRD18BA2A2Z9 1011 aa13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 ECE2O60344 883 aa13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 CSF1RP07333 972 aa13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 IFIT5Q13325 482 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 BSDC1Q9NW68 430 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 AKAP11Q9UKA4 1901 aa13.42□□□□□ -0.26
NSMCE1-211ENST00000566087 SCN9AQ15858 1988 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 RARSP54136 660 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 KIF4BQ2VIQ3 1234 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 TAF7LQ5H9L4 462 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 SAGE1Q9NXZ1 904 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 GGA1Q9UJY5 639 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 CHMP3Q9Y3E7 222 aa13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-211ENST00000566087 XDHP47989 1333 aa13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 ITGA6P23229 1130 aa13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 ATP2B4P23634 1241 aa13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 CASP7P55210 303 aa13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 TBC1D16Q8TBP0 767 aa13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 CSRNP1Q96S65 589 aa13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 GREM2Q9H772 168 aa13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-211ENST00000566087 SLC10A3P09131 477 aa13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 RPS12P25398 132 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 CDCA5Q96FF9 252 aa13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 LEMD3Q9Y2U8 911 aa13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 MYH3P11055 1940 aa13.39□□□□□ -0.27
NSMCE1-211ENST00000566087 ANGEL2Q5VTE6 544 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-211ENST00000566087 LMBR1LQ6UX01 489 aa13.38□□□□□ -0.27
NSMCE1-211ENST00000566087 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
NSMCE1-211ENST00000566087 GTF3C3Q9Y5Q9 886 aa13.38□□□□□ -0.27
NSMCE1-211ENST00000566087 UTYO14607 1347 aa13.38□□□□□ -0.27
NSMCE1-211ENST00000566087 UFL1O94874 794 aa13.37□□□□□ -0.27
NSMCE1-211ENST00000566087 MS4A1P11836 297 aa13.37□□□□□ -0.27
NSMCE1-211ENST00000566087 KCNJ4P48050 445 aa13.37□□□□□ -0.27
NSMCE1-211ENST00000566087 FOXO4P98177 505 aa13.37□□□□□ -0.27
NSMCE1-211ENST00000566087 MOB2Q70IA6 237 aa13.37□□□□□ -0.27
NSMCE1-211ENST00000566087 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
NSMCE1-211ENST00000566087 NEFLP07196 543 aa13.36□□□□□ -0.27
NSMCE1-211ENST00000566087 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-211ENST00000566087 SCARF1Q14162 830 aa13.36□□□□□ -0.27
NSMCE1-211ENST00000566087 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
NSMCE1-211ENST00000566087 CTU1Q7Z7A3 348 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-211ENST00000566087 CNNM1Q9NRU3 951 aa13.36□□□□□ -0.27
NSMCE1-211ENST00000566087 GNAI3P08754 354 aa13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 UBTFL1P0CB47 393 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 PRAMEF18Q5VWM3 479 aa13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 USP44Q9H0E7 712 aa13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 HPS5Q9UPZ3 1129 aa13.35□□□□□ -0.27
NSMCE1-211ENST00000566087 PDE4DIPQ5VU43 2346 aa13.34□□□□□ -0.27
NSMCE1-211ENST00000566087 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms