RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 GMLQ99445 158 aa12.27□□□□□ -0.45
SMPD3-206ENST00000566009 POLLQ9UGP5 575 aa12.27□□□□□ -0.45
SMPD3-206ENST00000566009 LAMB1P07942 1786 aa12.26□□□□□ -0.45
SMPD3-206ENST00000566009 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
SMPD3-206ENST00000566009 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
SMPD3-206ENST00000566009 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
SMPD3-206ENST00000566009 PAWRQ96IZ0 340 aaKnown RBP12.26□□□□□ -0.45
SMPD3-206ENST00000566009 HCN4Q9Y3Q4 1203 aa12.26□□□□□ -0.45
SMPD3-206ENST00000566009 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
SMPD3-206ENST00000566009 ZSWIM8A7E2V4 1837 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 SCN9AQ15858 1988 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 BTBD11A6QL63 1104 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 TFRCP02786 760 aaKnown RBP12.25□□□□□ -0.45
SMPD3-206ENST00000566009 HMOX1P09601 288 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 UBXN2AP68543 259 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 PPP1R42Q7Z4L9 355 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 MYLIPQ8WY64 445 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 TRIM47Q96LD4 638 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 EYA3Q99504 573 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 BIN2Q9UBW5 565 aaPredicted RBP12.25□□□□□ -0.45
SMPD3-206ENST00000566009 MAP3K15Q6ZN16 1313 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 ALPK3Q96L96 1907 aa12.25□□□□□ -0.45
SMPD3-206ENST00000566009 WNT10BO00744 389 aa12.24□□□□□ -0.45
SMPD3-206ENST00000566009 RAET1EQ8TD07 263 aa12.24□□□□□ -0.45
SMPD3-206ENST00000566009 C1QTNF1Q9BXJ1 281 aa12.24□□□□□ -0.45
SMPD3-206ENST00000566009 UNC93B1Q9H1C4 597 aa12.24□□□□□ -0.45
SMPD3-206ENST00000566009 SEMA6BQ9H3T3 888 aa12.24□□□□□ -0.45
SMPD3-206ENST00000566009 SRRDQ9UH36 339 aa12.24□□□□□ -0.45
SMPD3-206ENST00000566009 LAMA2P24043 3122 aaKnown RBP12.24□□□□□ -0.45
SMPD3-206ENST00000566009 NUP98P52948 1817 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 SSC5DA1L4H1 1573 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 UNCXA6NJT0 531 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 G3V3G9 751 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 GPSM2P81274 684 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 DCAF8Q5TAQ9 597 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 NECAB2Q7Z6G3 386 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
SMPD3-206ENST00000566009 ZC3H12CQ9C0D7 883 aaKnown RBP12.23□□□□□ -0.45
SMPD3-206ENST00000566009 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
SMPD3-206ENST00000566009 TLR2O60603 784 aa12.22□□□□□ -0.45
SMPD3-206ENST00000566009 CAPN2P17655 700 aa12.22□□□□□ -0.45
SMPD3-206ENST00000566009 TTLL7Q6ZT98 887 aa12.22□□□□□ -0.45
SMPD3-206ENST00000566009 BRI3BPQ8WY22 251 aa12.22□□□□□ -0.45
SMPD3-206ENST00000566009 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
SMPD3-206ENST00000566009 PIEZO1Q92508 2521 aa12.22□□□□□ -0.45
SMPD3-206ENST00000566009 SIPA1L3O60292 1781 aaPredicted RBP12.21□□□□□ -0.45
SMPD3-206ENST00000566009 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
SMPD3-206ENST00000566009 GNAT3A8MTJ3 354 aa12.21□□□□□ -0.45
SMPD3-206ENST00000566009 FOSL2P15408 326 aa12.21□□□□□ -0.45
SMPD3-206ENST00000566009 HOXD10P28358 340 aa12.21□□□□□ -0.45
SMPD3-206ENST00000566009 CTGFP29279 349 aa12.21□□□□□ -0.45
SMPD3-206ENST00000566009 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
SMPD3-206ENST00000566009 FAM43AQ8N2R8 423 aa12.21□□□□□ -0.45
SMPD3-206ENST00000566009 TBC1D16Q8TBP0 767 aa12.21□□□□□ -0.45
SMPD3-206ENST00000566009 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
SMPD3-206ENST00000566009 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
SMPD3-206ENST00000566009 COL2A1P02458 1487 aaPredicted RBP12.21□□□□□ -0.46
SMPD3-206ENST00000566009 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
SMPD3-206ENST00000566009 OSBPP22059 807 aa12.2□□□□□ -0.46
SMPD3-206ENST00000566009 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
SMPD3-206ENST00000566009 KIF6Q6ZMV9 814 aa12.2□□□□□ -0.46
SMPD3-206ENST00000566009 DIS3LQ8TF46 1054 aaKnown RBP12.2□□□□□ -0.46
SMPD3-206ENST00000566009 DEFB118Q96PH6 123 aa12.2□□□□□ -0.46
SMPD3-206ENST00000566009 FAM205AQ6ZU69 1335 aa12.19□□□□□ -0.46
SMPD3-206ENST00000566009 PSMC4P43686 418 aa12.19□□□□□ -0.46
SMPD3-206ENST00000566009 USP38Q8NB14 1042 aa12.19□□□□□ -0.46
SMPD3-206ENST00000566009 ADAMTS19Q8TE59 1207 aa12.19□□□□□ -0.46
SMPD3-206ENST00000566009 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
SMPD3-206ENST00000566009 LRFN3Q9BTN0 628 aa12.19□□□□□ -0.46
SMPD3-206ENST00000566009 LRRC37AA6NMS7 1700 aa12.19□□□□□ -0.46
SMPD3-206ENST00000566009 MYPNQ86TC9 1320 aa12.18□□□□□ -0.46
SMPD3-206ENST00000566009 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
SMPD3-206ENST00000566009 WDHD1O75717 1129 aaPredicted RBP12.18□□□□□ -0.46
SMPD3-206ENST00000566009 SASH1O94885 1247 aa12.18□□□□□ -0.46
SMPD3-206ENST00000566009 CCL15Q16663 113 aa12.18□□□□□ -0.46
SMPD3-206ENST00000566009 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
SMPD3-206ENST00000566009 OGFOD1Q8N543 542 aa12.18□□□□□ -0.46
SMPD3-206ENST00000566009 UHRF1Q96T88 793 aaPredicted RBP12.18□□□□□ -0.46
SMPD3-206ENST00000566009 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
SMPD3-206ENST00000566009 DEFB129Q9H1M3 183 aa12.18□□□□□ -0.46
SMPD3-206ENST00000566009 USP17L3A6NCW0 530 aa12.17□□□□□ -0.46
SMPD3-206ENST00000566009 USP17L4A6NCW7 530 aa12.17□□□□□ -0.46
SMPD3-206ENST00000566009 USP2O75604 605 aaPredicted RBP12.17□□□□□ -0.46
SMPD3-206ENST00000566009 FMNL1O95466 1100 aaPredicted RBP12.17□□□□□ -0.46
SMPD3-206ENST00000566009 USP17L1Q7RTZ2 530 aa12.17□□□□□ -0.46
SMPD3-206ENST00000566009 ANKRD13AQ8IZ07 590 aa12.17□□□□□ -0.46
SMPD3-206ENST00000566009 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
SMPD3-206ENST00000566009 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
SMPD3-206ENST00000566009 TTYH1Q9H313 450 aaPredicted RBP12.17□□□□□ -0.46
SMPD3-206ENST00000566009 ANKRD36CQ5JPF3 1778 aa12.17□□□□□ -0.46
SMPD3-206ENST00000566009 IREB2P48200 963 aaKnown RBP12.16□□□□□ -0.46
SMPD3-206ENST00000566009 MRE11P49959 708 aa12.16□□□□□ -0.46
SMPD3-206ENST00000566009 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
SMPD3-206ENST00000566009 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
SMPD3-206ENST00000566009 ATXN2LQ8WWM7 1075 aaKnown RBP12.16□□□□□ -0.46
SMPD3-206ENST00000566009 ELP3Q9H9T3 547 aa12.16□□□□□ -0.46
SMPD3-206ENST00000566009 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms