RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 KIAA2012Q0VF49 1180 aa15.55■□□□□ 0.08
SF3B3-206ENST00000565990 OS9Q13438 667 aaPredicted RBP15.55■□□□□ 0.08
SF3B3-206ENST00000565990 LRRCC1Q9C099 1032 aa15.55■□□□□ 0.08
SF3B3-206ENST00000565990 ZC3H12CQ9C0D7 883 aaKnown RBP15.55■□□□□ 0.08
SF3B3-206ENST00000565990 UTRNP46939 3433 aa15.55■□□□□ 0.08
SF3B3-206ENST00000565990 MED23Q9ULK4 1368 aa15.54■□□□□ 0.08
SF3B3-206ENST00000565990 A0A1B0GUL7 405 aa15.54■□□□□ 0.08
SF3B3-206ENST00000565990 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
SF3B3-206ENST00000565990 IARSP41252 1262 aaKnown RBP15.54■□□□□ 0.08
SF3B3-206ENST00000565990 TNNI3KQ59H18 835 aa15.54■□□□□ 0.08
SF3B3-206ENST00000565990 FBXO33Q7Z6M2 555 aa15.54■□□□□ 0.08
SF3B3-206ENST00000565990 EAF2Q96CJ1 260 aaPredicted RBP15.54■□□□□ 0.08
SF3B3-206ENST00000565990 ZNF277Q9NRM2 450 aaPredicted RBP15.54■□□□□ 0.08
SF3B3-206ENST00000565990 FPGT-TNNI3KV9GXZ4 949 aa15.54■□□□□ 0.08
SF3B3-206ENST00000565990 ARAP2Q8WZ64 1704 aa15.54■□□□□ 0.08
SF3B3-206ENST00000565990 KDM2BQ8NHM5 1336 aa15.53■□□□□ 0.08
SF3B3-206ENST00000565990 IFIT1P09914 478 aaKnown RBP15.53■□□□□ 0.08
SF3B3-206ENST00000565990 LMNB1P20700 586 aa15.53■□□□□ 0.08
SF3B3-206ENST00000565990 KLRK1P26718 216 aa15.53■□□□□ 0.08
SF3B3-206ENST00000565990 KCNJ4P48050 445 aa15.53■□□□□ 0.08
SF3B3-206ENST00000565990 ATP2B3Q16720 1220 aa15.53■□□□□ 0.08
SF3B3-206ENST00000565990 CLASRPQ8N2M8 674 aaKnown RBP15.53■□□□□ 0.08
SF3B3-206ENST00000565990 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
SF3B3-206ENST00000565990 SLC5A1P13866 664 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 IL1R1P14778 569 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 NUCB1Q02818 461 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 RASSF7Q02833 373 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 ERICH6Q7L0X2 663 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 XAGE2Q96GT9 111 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 GPR101Q96P66 508 aaPredicted RBP15.52■□□□□ 0.08
SF3B3-206ENST00000565990 COA1Q9GZY4 146 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 IL1RAPL2Q9NP60 686 aa15.52■□□□□ 0.08
SF3B3-206ENST00000565990 APBB1O00213 710 aa15.51■□□□□ 0.07
SF3B3-206ENST00000565990 RIMBP2O15034 1052 aa15.51■□□□□ 0.07
SF3B3-206ENST00000565990 SMARCA5O60264 1052 aaPredicted RBP15.51■□□□□ 0.07
SF3B3-206ENST00000565990 AOC3Q16853 763 aa15.51■□□□□ 0.07
SF3B3-206ENST00000565990 PODNQ7Z5L7 613 aa15.51■□□□□ 0.07
SF3B3-206ENST00000565990 NEUROD6Q96NK8 337 aa15.51■□□□□ 0.07
SF3B3-206ENST00000565990 COL4A5P29400 1685 aa15.51■□□□□ 0.07
SF3B3-206ENST00000565990 FZD9O00144 591 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 PPIP5K2O43314 1243 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 HIBADHP31937 336 aaKnown RBP15.5■□□□□ 0.07
SF3B3-206ENST00000565990 GYG1P46976 350 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 BCAMP50895 628 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 CAVIN4Q5BKX8 364 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 ANKRD45Q5TZF3 282 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 LARGE2Q8N3Y3 721 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 TDRD7Q8NHU6 1098 aaKnown RBP15.5■□□□□ 0.07
SF3B3-206ENST00000565990 CD209Q9NNX6 404 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 ZNF609O15014 1411 aa15.5■□□□□ 0.07
SF3B3-206ENST00000565990 ADORA1P30542 326 aa15.49■□□□□ 0.07
SF3B3-206ENST00000565990 CENPQQ7L2Z9 268 aaPredicted RBP15.49■□□□□ 0.07
SF3B3-206ENST00000565990 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
SF3B3-206ENST00000565990 ZNF512BQ96KM6 892 aaPredicted RBP15.49■□□□□ 0.07
SF3B3-206ENST00000565990 CCDC8Q9H0W5 538 aaPredicted RBP15.49■□□□□ 0.07
SF3B3-206ENST00000565990 DBNLQ9UJU6 430 aaKnown RBP15.49■□□□□ 0.07
SF3B3-206ENST00000565990 ZNRF3Q9ULT6 936 aa15.49■□□□□ 0.07
SF3B3-206ENST00000565990 PSME4Q14997 1843 aa15.49■□□□□ 0.07
SF3B3-206ENST00000565990 SCN9AQ15858 1988 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 YDJCA8MPS7 323 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 DOK7Q18PE1 504 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 C9orf131Q5VYM1 1079 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 CCDC102BQ68D86 513 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 ZNF804AQ7Z570 1209 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 AACSQ86V21 672 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
SF3B3-206ENST00000565990 DBNDD2Q9BQY9 259 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 AKAP11Q9UKA4 1901 aa15.48■□□□□ 0.07
SF3B3-206ENST00000565990 IFIT2P09913 472 aaKnown RBP15.47■□□□□ 0.07
SF3B3-206ENST00000565990 JDP2Q8WYK2 163 aa15.47■□□□□ 0.07
SF3B3-206ENST00000565990 ZNF646O15015 1829 aaPredicted RBP15.47■□□□□ 0.07
SF3B3-206ENST00000565990 SALL3Q9BXA9 1300 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 ZC3H4Q9UPT8 1303 aaKnown RBP15.46■□□□□ 0.07
SF3B3-206ENST00000565990 SEMA3EO15041 775 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 ECE2O60344 883 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
SF3B3-206ENST00000565990 PHKA1P46020 1223 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 CCDC158Q5M9N0 1113 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 NIM1KQ8IY84 436 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 DBNDD1Q9H9R9 158 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 KCNQ5Q9NR82 932 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 TLR7Q9NYK1 1049 aaKnown RBP15.46■□□□□ 0.07
SF3B3-206ENST00000565990 RNF181Q9P0P0 153 aa15.46■□□□□ 0.07
SF3B3-206ENST00000565990 FAM205AQ6ZU69 1335 aa15.45■□□□□ 0.06
SF3B3-206ENST00000565990 MYH13Q9UKX3 1938 aa15.45■□□□□ 0.06
SF3B3-206ENST00000565990 UQCRFS1P1P0C7P4 283 aa15.45■□□□□ 0.06
SF3B3-206ENST00000565990 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
SF3B3-206ENST00000565990 CXCL9Q07325 125 aa15.45■□□□□ 0.06
SF3B3-206ENST00000565990 VPS37DQ86XT2 251 aa15.45■□□□□ 0.06
SF3B3-206ENST00000565990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.45■□□□□ 0.06
SF3B3-206ENST00000565990 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
SF3B3-206ENST00000565990 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
SF3B3-206ENST00000565990 PDS5AQ29RF7 1337 aaKnown RBP15.44■□□□□ 0.06
SF3B3-206ENST00000565990 G3V3G9 751 aa15.44■□□□□ 0.06
SF3B3-206ENST00000565990 VIL1P09327 827 aaKnown RBP15.44■□□□□ 0.06
SF3B3-206ENST00000565990 ATP5JP18859 108 aa15.44■□□□□ 0.06
SF3B3-206ENST00000565990 FKBP1AP62942 108 aaKnown RBP15.44■□□□□ 0.06
SF3B3-206ENST00000565990 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
SF3B3-206ENST00000565990 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
SF3B3-206ENST00000565990 LNPKQ9C0E8 428 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms