RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-210ENST00000565966 RPS12P25398 132 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-210ENST00000565966 PANK1Q8TE04 598 aa17.29■□□□□ 0.36
HERPUD1-210ENST00000565966 CNOT7Q9UIV1 285 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-210ENST00000565966 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
HERPUD1-210ENST00000565966 MROH5Q6ZUA9 1318 aa17.28■□□□□ 0.36
HERPUD1-210ENST00000565966 H7C1D1 291 aa17.28■□□□□ 0.36
HERPUD1-210ENST00000565966 SNAP23O00161 211 aa17.28■□□□□ 0.36
HERPUD1-210ENST00000565966 APLP1P51693 650 aa17.28■□□□□ 0.36
HERPUD1-210ENST00000565966 C15orf52Q6ZUT6 534 aaKnown RBP17.28■□□□□ 0.36
HERPUD1-210ENST00000565966 USP17L3A6NCW0 530 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 USP17L4A6NCW7 530 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 MS4A1P11836 297 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 KLRK1P26718 216 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 RFX5P48382 616 aaPredicted RBP17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 ITPRIPQ8IWB1 547 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 KLHDC4Q8TBB5 520 aa17.27■□□□□ 0.36
HERPUD1-210ENST00000565966 ZNF646O15015 1829 aaPredicted RBP17.26■□□□□ 0.35
HERPUD1-210ENST00000565966 PTPN12Q05209 780 aaKnown RBP17.26■□□□□ 0.35
HERPUD1-210ENST00000565966 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
HERPUD1-210ENST00000565966 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
HERPUD1-210ENST00000565966 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
HERPUD1-210ENST00000565966 IRS2Q9Y4H2 1338 aa17.25■□□□□ 0.35
HERPUD1-210ENST00000565966 ZBTB7BO15156 539 aaPredicted RBP17.25■□□□□ 0.35
HERPUD1-210ENST00000565966 GNAI2P04899 355 aa17.25■□□□□ 0.35
HERPUD1-210ENST00000565966 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
HERPUD1-210ENST00000565966 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
HERPUD1-210ENST00000565966 CD209Q9NNX6 404 aa17.25■□□□□ 0.35
HERPUD1-210ENST00000565966 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
HERPUD1-210ENST00000565966 ZNF609O15014 1411 aa17.24■□□□□ 0.35
HERPUD1-210ENST00000565966 EYA2O00167 538 aa17.24■□□□□ 0.35
HERPUD1-210ENST00000565966 PDE8BO95263 885 aa17.24■□□□□ 0.35
HERPUD1-210ENST00000565966 STRIP1Q5VSL9 837 aa17.24■□□□□ 0.35
HERPUD1-210ENST00000565966 ZNF804AQ7Z570 1209 aa17.24■□□□□ 0.35
HERPUD1-210ENST00000565966 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
HERPUD1-210ENST00000565966 TRPM7Q96QT4 1865 aa17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 MTX1Q13505 466 aa17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 GMLQ99445 158 aa17.23■□□□□ 0.35
HERPUD1-210ENST00000565966 IL1R1P14778 569 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 HIRAP54198 1017 aaPredicted RBP17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 DACT2Q5SW24 774 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 C20orf194Q5TEA3 1177 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 SAMD7Q7Z3H4 446 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 VGLL2Q8N8G2 317 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 ZC3H15Q8WU90 426 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
HERPUD1-210ENST00000565966 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 SRGAP3O43295 1099 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 CIAO1O76071 339 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 GTF2IP78347 998 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 PGAP2Q9UHJ9 254 aa17.21■□□□□ 0.35
HERPUD1-210ENST00000565966 CEP350Q5VT06 3117 aa17.21■□□□□ 0.34
HERPUD1-210ENST00000565966 USP17L8P0C7I0 530 aa17.2■□□□□ 0.34
HERPUD1-210ENST00000565966 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-210ENST00000565966 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-210ENST00000565966 RBM26Q5T8P6 1007 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-210ENST00000565966 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-210ENST00000565966 SIL1Q9H173 461 aa17.2■□□□□ 0.34
HERPUD1-210ENST00000565966 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
HERPUD1-210ENST00000565966 MYH13Q9UKX3 1938 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 SASH1O94885 1247 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 GYG1P46976 350 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 MMP14P50281 582 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 ZNF280AP59817 542 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 PUM3Q15397 648 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-210ENST00000565966 EGFRP00533 1210 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 IFIT1P09914 478 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 FGFR2P21802 821 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 RRP1P56182 461 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 HTRA3P83110 453 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 OGFOD1Q8N543 542 aa17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 TDRD7Q8NHU6 1098 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-210ENST00000565966 FKBP1AP62942 108 aaKnown RBP17.17■□□□□ 0.34
HERPUD1-210ENST00000565966 LPIN2Q92539 896 aa17.17■□□□□ 0.34
HERPUD1-210ENST00000565966 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms