RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 NSFL1CQ9UNZ2 370 aaKnown RBP18.81■□□□□ 0.6
KNOP1-203ENST00000565844 DUOX1Q9NRD9 1551 aa18.8■□□□□ 0.6
KNOP1-203ENST00000565844 ZNF609O15014 1411 aa18.8■□□□□ 0.6
KNOP1-203ENST00000565844 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
KNOP1-203ENST00000565844 NUCB1Q02818 461 aa18.8■□□□□ 0.6
KNOP1-203ENST00000565844 KCNJ4P48050 445 aa18.79■□□□□ 0.6
KNOP1-203ENST00000565844 FSTL1Q12841 308 aa18.79■□□□□ 0.6
KNOP1-203ENST00000565844 PUM3Q15397 648 aaKnown RBP18.79■□□□□ 0.6
KNOP1-203ENST00000565844 ATP2B3Q16720 1220 aa18.79■□□□□ 0.6
KNOP1-203ENST00000565844 CC2D2BQ6DHV5 1058 aa18.79■□□□□ 0.6
KNOP1-203ENST00000565844 CLASRPQ8N2M8 674 aaKnown RBP18.79■□□□□ 0.6
KNOP1-203ENST00000565844 MPNDQ8N594 471 aa18.79■□□□□ 0.6
KNOP1-203ENST00000565844 SMC1BQ8NDV3 1235 aa18.79■□□□□ 0.6
KNOP1-203ENST00000565844 AKAP2Q9Y2D5 859 aa18.79■□□□□ 0.6
KNOP1-203ENST00000565844 ZNF541Q9H0D2 1346 aa18.78■□□□□ 0.6
KNOP1-203ENST00000565844 TNNI3KQ59H18 835 aa18.78■□□□□ 0.6
KNOP1-203ENST00000565844 DPP8Q6V1X1 898 aaPredicted RBP18.78■□□□□ 0.6
KNOP1-203ENST00000565844 CHD1LQ86WJ1 897 aa18.78■□□□□ 0.6
KNOP1-203ENST00000565844 PODXL2Q9NZ53 605 aa18.78■□□□□ 0.6
KNOP1-203ENST00000565844 FPGT-TNNI3KV9GXZ4 949 aa18.78■□□□□ 0.6
KNOP1-203ENST00000565844 SNED1Q8TER0 1413 aa18.78■□□□□ 0.6
KNOP1-203ENST00000565844 COL4A5P29400 1685 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 SNAP23O00161 211 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 UFL1O94874 794 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 POTEIP0CG38 1075 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 POTEJP0CG39 1038 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 AACSQ86V21 672 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 LNPKQ9C0E8 428 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 GPR108Q9NPR9 543 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 GGA1Q9UJY5 639 aa18.77■□□□□ 0.6
KNOP1-203ENST00000565844 SCN4AP35499 1836 aa18.77■□□□□ 0.59
KNOP1-203ENST00000565844 ZNF804BA4D1E1 1349 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 A0A1B0GUL7 405 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 WTIPA6NIX2 430 aaPredicted RBP18.76■□□□□ 0.59
KNOP1-203ENST00000565844 SLC5A1P13866 664 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 ATP2B4P23634 1241 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 GRIPAP1Q4V328 841 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 RTKN2Q8IZC4 609 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 LPIN2Q92539 896 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 EAF2Q96CJ1 260 aaPredicted RBP18.76■□□□□ 0.59
KNOP1-203ENST00000565844 LEMD3Q9Y2U8 911 aa18.76■□□□□ 0.59
KNOP1-203ENST00000565844 C6orf229H3BNL8 230 aa18.75■□□□□ 0.59
KNOP1-203ENST00000565844 IFIT2P09913 472 aaKnown RBP18.75■□□□□ 0.59
KNOP1-203ENST00000565844 FGFR2P21802 821 aa18.75■□□□□ 0.59
KNOP1-203ENST00000565844 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
KNOP1-203ENST00000565844 TIMM10P62072 90 aa18.75■□□□□ 0.59
KNOP1-203ENST00000565844 UBE4AQ14139 1066 aa18.75■□□□□ 0.59
KNOP1-203ENST00000565844 DNAJC5GQ8N7S2 189 aa18.75■□□□□ 0.59
KNOP1-203ENST00000565844 TBC1D16Q8TBP0 767 aa18.75■□□□□ 0.59
KNOP1-203ENST00000565844 NEUROD6Q96NK8 337 aa18.75■□□□□ 0.59
KNOP1-203ENST00000565844 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
KNOP1-203ENST00000565844 CCDC8Q9H0W5 538 aaPredicted RBP18.74■□□□□ 0.59
KNOP1-203ENST00000565844 POLLQ9UGP5 575 aa18.74■□□□□ 0.59
KNOP1-203ENST00000565844 GPR101Q96P66 508 aaPredicted RBP18.73■□□□□ 0.59
KNOP1-203ENST00000565844 TLR7Q9NYK1 1049 aaKnown RBP18.73■□□□□ 0.59
KNOP1-203ENST00000565844 MYH13Q9UKX3 1938 aa18.73■□□□□ 0.59
KNOP1-203ENST00000565844 KLRK1P26718 216 aa18.72■□□□□ 0.59
KNOP1-203ENST00000565844 ADORA1P30542 326 aa18.72■□□□□ 0.59
KNOP1-203ENST00000565844 SUPT20HQ8NEM7 779 aa18.72■□□□□ 0.59
KNOP1-203ENST00000565844 XAGE2Q96GT9 111 aa18.72■□□□□ 0.59
KNOP1-203ENST00000565844 PSMD1Q99460 953 aa18.72■□□□□ 0.59
KNOP1-203ENST00000565844 DBNDD2Q9BQY9 259 aa18.72■□□□□ 0.59
KNOP1-203ENST00000565844 RTFDC1Q9BY42 306 aaPredicted RBP18.72■□□□□ 0.59
KNOP1-203ENST00000565844 DBNLQ9UJU6 430 aaKnown RBP18.72■□□□□ 0.59
KNOP1-203ENST00000565844 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
KNOP1-203ENST00000565844 GORABQ5T7V8 394 aa18.71■□□□□ 0.59
KNOP1-203ENST00000565844 OTUD7AQ8TE49 926 aaPredicted RBP18.71■□□□□ 0.59
KNOP1-203ENST00000565844 EYA3Q99504 573 aa18.71■□□□□ 0.59
KNOP1-203ENST00000565844 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
KNOP1-203ENST00000565844 GJA3Q9Y6H8 435 aa18.7■□□□□ 0.58
KNOP1-203ENST00000565844 IRS2Q9Y4H2 1338 aa18.7■□□□□ 0.58
KNOP1-203ENST00000565844 RIMBP2O15034 1052 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 PDE4AP27815 886 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 GYG1P46976 350 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 WASHC4Q2M389 1173 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 CAVIN4Q5BKX8 364 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
KNOP1-203ENST00000565844 TXNRD3Q86VQ6 643 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 SKAP1Q86WV1 359 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 LARGE2Q8N3Y3 721 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 ZC3H12CQ9C0D7 883 aaKnown RBP18.69■□□□□ 0.58
KNOP1-203ENST00000565844 PCNTO95613 3336 aa18.69■□□□□ 0.58
KNOP1-203ENST00000565844 MX1P20591 662 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 VPS37DQ86XT2 251 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 JDP2Q8WYK2 163 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 KLRG1Q96E93 195 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 GPATCH3Q96I76 525 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 TAF1DQ9H5J8 278 aaPredicted RBP18.68■□□□□ 0.58
KNOP1-203ENST00000565844 SALL3Q9BXA9 1300 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 FZD9O00144 591 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 AOC3Q16853 763 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 CCDC102BQ68D86 513 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 CHADLQ6NUI6 762 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 ZNF804AQ7Z570 1209 aa18.68■□□□□ 0.58
KNOP1-203ENST00000565844 IQCA1LA6NCM1 817 aa18.67■□□□□ 0.58
KNOP1-203ENST00000565844 PPIP5K2O43314 1243 aa18.67■□□□□ 0.58
KNOP1-203ENST00000565844 HIBADHP31937 336 aaKnown RBP18.67■□□□□ 0.58
KNOP1-203ENST00000565844 PHKA1P46020 1223 aa18.67■□□□□ 0.58
KNOP1-203ENST00000565844 BCAMP50895 628 aa18.67■□□□□ 0.58
KNOP1-203ENST00000565844 CCDC158Q5M9N0 1113 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms