RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 USP17L3A6NCW0 530 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 USP17L4A6NCW7 530 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 ADM5C9JUS6 153 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 ZNF280AP59817 542 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 CYP4F22Q6NT55 531 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 PAXIP1Q6ZW49 1069 aaPredicted RBP13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 CDC37L1Q7L3B6 337 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 USP17L1Q7RTZ2 530 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 FBXW7Q969H0 707 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 SUCLG2Q96I99 432 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 ANKRD2Q9GZV1 360 aa13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 WDR33Q9C0J8 1336 aaKnown RBP13.86□□□□□ -0.19
NSMCE1-210ENST00000565626 DACT2Q5SW24 774 aa13.85□□□□□ -0.19
NSMCE1-210ENST00000565626 KRT26Q7Z3Y9 468 aa13.85□□□□□ -0.19
NSMCE1-210ENST00000565626 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
NSMCE1-210ENST00000565626 AGBL3Q8NEM8 1001 aa13.85□□□□□ -0.19
NSMCE1-210ENST00000565626 CAPNS2Q96L46 248 aa13.85□□□□□ -0.19
NSMCE1-210ENST00000565626 TLL2Q9Y6L7 1015 aa13.85□□□□□ -0.19
NSMCE1-210ENST00000565626 FOXN1O15353 648 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 USP17L8P0C7I0 530 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 KCNJ4P48050 445 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 SAPCD2Q86UD0 394 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 GGA3Q9NZ52 723 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 SCAF8Q9UPN6 1271 aaKnown RBP13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 IRS2Q9Y4H2 1338 aa13.84□□□□□ -0.19
NSMCE1-210ENST00000565626 PLIN1O60240 522 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 SCARF1Q14162 830 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 DCPSQ96C86 337 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 MYOZ2Q9NPC6 264 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 CNNM1Q9NRU3 951 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 SMC4Q9NTJ3 1288 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 UTYO14607 1347 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 PTPRCP08575 1304 aa13.83□□□□□ -0.2
NSMCE1-210ENST00000565626 TRPM7Q96QT4 1865 aa13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 ZNF609O15014 1411 aa13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 AOC2O75106 756 aa13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 GTF2IP78347 998 aa13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 STRIP1Q5VSL9 837 aa13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 ANGEL2Q5VTE6 544 aaKnown RBP13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 CD209Q9NNX6 404 aa13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 WBP1LQ9NX94 342 aa13.82□□□□□ -0.2
NSMCE1-210ENST00000565626 NBPF9Q3BBW0 867 aa13.81□□□□□ -0.2
NSMCE1-210ENST00000565626 ALDH1L2Q3SY69 923 aa13.81□□□□□ -0.2
NSMCE1-210ENST00000565626 TTLL5Q6EMB2 1281 aa13.81□□□□□ -0.2
NSMCE1-210ENST00000565626 ANKRD44Q8N8A2 993 aa13.81□□□□□ -0.2
NSMCE1-210ENST00000565626 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
NSMCE1-210ENST00000565626 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
NSMCE1-210ENST00000565626 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
NSMCE1-210ENST00000565626 ECE1P42892 770 aa13.8□□□□□ -0.2
NSMCE1-210ENST00000565626 KIAA0825Q8IV33 1275 aa13.8□□□□□ -0.2
NSMCE1-210ENST00000565626 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
NSMCE1-210ENST00000565626 MIER1Q8N108 512 aa13.8□□□□□ -0.2
NSMCE1-210ENST00000565626 AIDAQ96BJ3 306 aa13.8□□□□□ -0.2
NSMCE1-210ENST00000565626 PSME4Q14997 1843 aa13.8□□□□□ -0.2
NSMCE1-210ENST00000565626 SASH1O94885 1247 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 HUNKP57058 714 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 RABL6Q3YEC7 729 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 PRAMEF18Q5VWM3 479 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 C15orf52Q6ZUT6 534 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 TNS4Q8IZW8 715 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 CERS5Q8N5B7 392 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 KLHDC4Q8TBB5 520 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 CDCA5Q96FF9 252 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 ZIC5Q96T25 663 aa13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-210ENST00000565626 ZNF646O15015 1829 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-210ENST00000565626 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-210ENST00000565626 LBX1P52954 281 aa13.78□□□□□ -0.2
NSMCE1-210ENST00000565626 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
NSMCE1-210ENST00000565626 GBA2Q9HCG7 927 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-210ENST00000565626 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
NSMCE1-210ENST00000565626 F8W031 263 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 WNT10BO00744 389 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 HSPA8P11142 646 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 IL1R1P14778 569 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 GYG1P46976 350 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 MAP2K1Q02750 393 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 ZNF804AQ7Z570 1209 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 MYO3BQ8WXR4 1341 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 HHIPL1Q96JK4 782 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 TSKSQ9UJT2 592 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 PCDHAC2Q9Y5I4 1007 aa13.77□□□□□ -0.21
NSMCE1-210ENST00000565626 A0A1B0GUL6 1792 aa13.76□□□□□ -0.21
NSMCE1-210ENST00000565626 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-210ENST00000565626 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-210ENST00000565626 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
NSMCE1-210ENST00000565626 C2orf69Q8N8R5 385 aa13.76□□□□□ -0.21
NSMCE1-210ENST00000565626 PITPNM2Q9BZ72 1349 aa13.75□□□□□ -0.21
NSMCE1-210ENST00000565626 CAPN15O75808 1086 aa13.75□□□□□ -0.21
NSMCE1-210ENST00000565626 CT47B1P0C2W7 299 aaPredicted RBP13.75□□□□□ -0.21
NSMCE1-210ENST00000565626 MAP2K2P36507 400 aa13.75□□□□□ -0.21
NSMCE1-210ENST00000565626 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
NSMCE1-210ENST00000565626 FAM84BQ96KN1 310 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms