RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 FOXO4P98177 505 aa30.28■■■□□ 2.44
RAB40C-209ENST00000565511 IGHMBP2P38935 993 aaKnown RBP30.27■■■□□ 2.44
RAB40C-209ENST00000565511 MAP2K1Q02750 393 aaPredicted RBP30.27■■■□□ 2.44
RAB40C-209ENST00000565511 AGBL3Q8NEM8 1001 aa30.27■■■□□ 2.44
RAB40C-209ENST00000565511 USP17L3A6NCW0 530 aa30.26■■■□□ 2.43
RAB40C-209ENST00000565511 USP17L4A6NCW7 530 aa30.26■■■□□ 2.43
RAB40C-209ENST00000565511 EPHA10Q5JZY3 1008 aa30.26■■■□□ 2.43
RAB40C-209ENST00000565511 USP17L1Q7RTZ2 530 aa30.26■■■□□ 2.43
RAB40C-209ENST00000565511 SNAP23O00161 211 aa30.25■■■□□ 2.43
RAB40C-209ENST00000565511 PODNQ7Z5L7 613 aa30.25■■■□□ 2.43
RAB40C-209ENST00000565511 ZIC5Q96T25 663 aa30.25■■■□□ 2.43
RAB40C-209ENST00000565511 DACT2Q5SW24 774 aa30.24■■■□□ 2.43
RAB40C-209ENST00000565511 DCPSQ96C86 337 aaKnown RBP30.24■■■□□ 2.43
RAB40C-209ENST00000565511 HHIPL1Q96JK4 782 aa30.24■■■□□ 2.43
RAB40C-209ENST00000565511 SCARF1Q14162 830 aa30.23■■■□□ 2.43
RAB40C-209ENST00000565511 TSKSQ9UJT2 592 aa30.23■■■□□ 2.43
RAB40C-209ENST00000565511 ZNF804BA4D1E1 1349 aa30.22■■■□□ 2.43
RAB40C-209ENST00000565511 IRS2Q9Y4H2 1338 aa30.22■■■□□ 2.43
RAB40C-209ENST00000565511 HUNKP57058 714 aa30.22■■■□□ 2.43
RAB40C-209ENST00000565511 CHRNDQ07001 517 aa30.22■■■□□ 2.43
RAB40C-209ENST00000565511 SCAF8Q9UPN6 1271 aaKnown RBP30.22■■■□□ 2.43
RAB40C-209ENST00000565511 LEMD3Q9Y2U8 911 aa30.22■■■□□ 2.43
RAB40C-209ENST00000565511 USP17L8P0C7I0 530 aa30.21■■■□□ 2.43
RAB40C-209ENST00000565511 ANGEL2Q5VTE6 544 aaKnown RBP30.21■■■□□ 2.43
RAB40C-209ENST00000565511 MPHOSPH8Q99549 860 aa30.21■■■□□ 2.43
RAB40C-209ENST00000565511 MYOZ2Q9NPC6 264 aa30.21■■■□□ 2.43
RAB40C-209ENST00000565511 MAP2K2P36507 400 aa30.2■■■□□ 2.43
RAB40C-209ENST00000565511 GBA2Q9HCG7 927 aaPredicted RBP30.2■■■□□ 2.43
RAB40C-209ENST00000565511 ANKRD18BA2A2Z9 1011 aa30.19■■■□□ 2.42
RAB40C-209ENST00000565511 HELBQ8NG08 1087 aaPredicted RBP30.19■■■□□ 2.42
RAB40C-209ENST00000565511 FBXW7Q969H0 707 aa30.19■■■□□ 2.42
RAB40C-209ENST00000565511 CDCA5Q96FF9 252 aa30.19■■■□□ 2.42
RAB40C-209ENST00000565511 ANKRD2Q9GZV1 360 aa30.19■■■□□ 2.42
RAB40C-209ENST00000565511 COA1Q9GZY4 146 aa30.19■■■□□ 2.42
RAB40C-209ENST00000565511 GRM8O00222 908 aa30.18■■■□□ 2.42
RAB40C-209ENST00000565511 TAF5LO75529 589 aa30.18■■■□□ 2.42
RAB40C-209ENST00000565511 LMBR1LQ6UX01 489 aa30.18■■■□□ 2.42
RAB40C-209ENST00000565511 ZNF594Q96JF6 807 aaPredicted RBP30.18■■■□□ 2.42
RAB40C-209ENST00000565511 CHMP3Q9Y3E7 222 aa30.18■■■□□ 2.42
RAB40C-209ENST00000565511 SULF1Q8IWU6 871 aa30.17■■■□□ 2.42
RAB40C-209ENST00000565511 FAM155AB1AL88 458 aaPredicted RBP30.16■■■□□ 2.42
RAB40C-209ENST00000565511 NBPF9Q3BBW0 867 aa30.16■■■□□ 2.42
RAB40C-209ENST00000565511 STRIP1Q5VSL9 837 aa30.16■■■□□ 2.42
RAB40C-209ENST00000565511 SLC4A10Q6U841 1118 aa30.16■■■□□ 2.42
RAB40C-209ENST00000565511 IFIT5Q13325 482 aaKnown RBP30.15■■■□□ 2.42
RAB40C-209ENST00000565511 KAZALD1Q96I82 304 aa30.15■■■□□ 2.42
RAB40C-209ENST00000565511 BRPF1P55201 1214 aaPredicted RBP30.13■■■□□ 2.41
RAB40C-209ENST00000565511 RGMBQ6NW40 437 aa30.13■■■□□ 2.41
RAB40C-209ENST00000565511 MRPL50Q8N5N7 158 aaKnown RBP30.13■■■□□ 2.41
RAB40C-209ENST00000565511 C2orf69Q8N8R5 385 aa30.13■■■□□ 2.41
RAB40C-209ENST00000565511 SUCLG2Q96I99 432 aa30.13■■■□□ 2.41
RAB40C-209ENST00000565511 CASP8AP2Q9UKL3 1982 aa30.13■■■□□ 2.41
RAB40C-209ENST00000565511 PAPPA2Q9BXP8 1791 aa30.13■■■□□ 2.41
RAB40C-209ENST00000565511 ALDH1L1O75891 902 aa30.12■■■□□ 2.41
RAB40C-209ENST00000565511 SASH1O94885 1247 aa30.12■■■□□ 2.41
RAB40C-209ENST00000565511 KCNJ4P48050 445 aa30.12■■■□□ 2.41
RAB40C-209ENST00000565511 SRCIN1Q9C0H9 1055 aa30.12■■■□□ 2.41
RAB40C-209ENST00000565511 GTF2IP78347 998 aa30.11■■■□□ 2.41
RAB40C-209ENST00000565511 PRAMEF18Q5VWM3 479 aa30.11■■■□□ 2.41
RAB40C-209ENST00000565511 TTLL5Q6EMB2 1281 aa30.11■■■□□ 2.41
RAB40C-209ENST00000565511 BEGAINQ9BUH8 593 aa30.11■■■□□ 2.41
RAB40C-209ENST00000565511 CD209Q9NNX6 404 aa30.11■■■□□ 2.41
RAB40C-209ENST00000565511 PITPNM2Q9BZ72 1349 aa30.11■■■□□ 2.41
RAB40C-209ENST00000565511 WNT10BO00744 389 aa30.1■■■□□ 2.41
RAB40C-209ENST00000565511 NOGQ13253 232 aa30.1■■■□□ 2.41
RAB40C-209ENST00000565511 CERS5Q8N5B7 392 aa30.1■■■□□ 2.41
RAB40C-209ENST00000565511 C9orf78Q9NZ63 289 aaPredicted RBP30.1■■■□□ 2.41
RAB40C-209ENST00000565511 NBPF7P0C2Y1 421 aaPredicted RBP30.09■■■□□ 2.41
RAB40C-209ENST00000565511 C15orf52Q6ZUT6 534 aaKnown RBP30.09■■■□□ 2.41
RAB40C-209ENST00000565511 MOB2Q70IA6 237 aa30.09■■■□□ 2.41
RAB40C-209ENST00000565511 KIAA0825Q8IV33 1275 aa30.09■■■□□ 2.41
RAB40C-209ENST00000565511 MYO3BQ8WXR4 1341 aa30.09■■■□□ 2.41
RAB40C-209ENST00000565511 ZNF157P51786 506 aaPredicted RBP30.07■■■□□ 2.4
RAB40C-209ENST00000565511 SSH1Q8WYL5 1049 aa30.07■■■□□ 2.4
RAB40C-209ENST00000565511 CDCA7LQ96GN5 454 aa30.07■■■□□ 2.4
RAB40C-209ENST00000565511 ZBED3Q96IU2 234 aaPredicted RBP30.07■■■□□ 2.4
RAB40C-209ENST00000565511 PUS3Q9BZE2 481 aaKnown RBP30.07■■■□□ 2.4
RAB40C-209ENST00000565511 UTYO14607 1347 aa30.06■■■□□ 2.4
RAB40C-209ENST00000565511 SLC10A3P09131 477 aa30.06■■■□□ 2.4
RAB40C-209ENST00000565511 SLFN5Q08AF3 891 aa30.06■■■□□ 2.4
RAB40C-209ENST00000565511 CCDC57Q2TAC2 916 aa30.06■■■□□ 2.4
RAB40C-209ENST00000565511 PCDHAC2Q9Y5I4 1007 aa30.06■■■□□ 2.4
RAB40C-209ENST00000565511 E9PSI1 815 aa30.05■■■□□ 2.4
RAB40C-209ENST00000565511 PLIN1O60240 522 aa30.05■■■□□ 2.4
RAB40C-209ENST00000565511 KIF23Q02241 960 aaPredicted RBP30.05■■■□□ 2.4
RAB40C-209ENST00000565511 LDHAL6AQ6ZMR3 332 aa30.05■■■□□ 2.4
RAB40C-209ENST00000565511 JAG2Q9Y219 1238 aa30.05■■■□□ 2.4
RAB40C-209ENST00000565511 ECM29Q5VYK3 1845 aa30.04■■■□□ 2.4
RAB40C-209ENST00000565511 RASAL3Q86YV0 1011 aa30.04■■■□□ 2.4
RAB40C-209ENST00000565511 OGFOD1Q8N543 542 aa30.04■■■□□ 2.4
RAB40C-209ENST00000565511 IL1R1P14778 569 aa30.03■■■□□ 2.4
RAB40C-209ENST00000565511 TAF7LQ5H9L4 462 aa30.03■■■□□ 2.4
RAB40C-209ENST00000565511 ANKRD44Q8N8A2 993 aa30.03■■■□□ 2.4
RAB40C-209ENST00000565511 CNNM1Q9NRU3 951 aa30.03■■■□□ 2.4
RAB40C-209ENST00000565511 AOX1Q06278 1338 aa30.02■■■□□ 2.4
RAB40C-209ENST00000565511 ABHD8Q96I13 439 aa30.02■■■□□ 2.4
RAB40C-209ENST00000565511 BICC1Q9H694 974 aaKnown RBP30.02■■■□□ 2.4
RAB40C-209ENST00000565511 AKAP11Q9UKA4 1901 aa30.02■■■□□ 2.4
RAB40C-209ENST00000565511 CA12O43570 354 aa30.01■■■□□ 2.39
RAB40C-209ENST00000565511 CCDC102AQ96A19 550 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms