RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SCNN1DP51172 638 aa12.43□□□□□ -0.42
CDH1-206ENST00000564676 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
CDH1-206ENST00000564676 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
CDH1-206ENST00000564676 TMEM57Q8N5G2 664 aa12.43□□□□□ -0.42
CDH1-206ENST00000564676 PUS3Q9BZE2 481 aaKnown RBP12.43□□□□□ -0.42
CDH1-206ENST00000564676 KCNQ5Q9NR82 932 aa12.43□□□□□ -0.42
CDH1-206ENST00000564676 SNAP23O00161 211 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 METTL24Q5JXM2 366 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 CHADLQ6NUI6 762 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 PODNQ7Z5L7 613 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 LDHDQ86WU2 507 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 YTHDC1Q96MU7 727 aaKnown RBP12.42□□□□□ -0.42
CDH1-206ENST00000564676 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 GPRC5DQ9NZD1 345 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 RIPOR2Q9Y4F9 1068 aa12.42□□□□□ -0.42
CDH1-206ENST00000564676 MROH5Q6ZUA9 1318 aa12.41□□□□□ -0.42
CDH1-206ENST00000564676 H7C1D1 291 aa12.41□□□□□ -0.42
CDH1-206ENST00000564676 HSPA6P17066 643 aa12.41□□□□□ -0.42
CDH1-206ENST00000564676 KLRK1P26718 216 aa12.41□□□□□ -0.42
CDH1-206ENST00000564676 LRRC24Q50LG9 513 aa12.41□□□□□ -0.42
CDH1-206ENST00000564676 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
CDH1-206ENST00000564676 FBXW7Q969H0 707 aa12.41□□□□□ -0.42
CDH1-206ENST00000564676 ADARB2Q9NS39 739 aaKnown RBP12.41□□□□□ -0.42
CDH1-206ENST00000564676 CNOT7Q9UIV1 285 aaKnown RBP12.41□□□□□ -0.42
CDH1-206ENST00000564676 USP17L3A6NCW0 530 aa12.4□□□□□ -0.42
CDH1-206ENST00000564676 USP17L4A6NCW7 530 aa12.4□□□□□ -0.42
CDH1-206ENST00000564676 GNAI2P04899 355 aa12.4□□□□□ -0.42
CDH1-206ENST00000564676 VIL1P09327 827 aaKnown RBP12.4□□□□□ -0.42
CDH1-206ENST00000564676 RPS12P25398 132 aaKnown RBP12.4□□□□□ -0.42
CDH1-206ENST00000564676 RFX5P48382 616 aaPredicted RBP12.4□□□□□ -0.42
CDH1-206ENST00000564676 UBE4AQ14139 1066 aa12.4□□□□□ -0.42
CDH1-206ENST00000564676 USP50Q70EL3 339 aaPredicted RBP12.4□□□□□ -0.42
CDH1-206ENST00000564676 USP17L1Q7RTZ2 530 aa12.4□□□□□ -0.42
CDH1-206ENST00000564676 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
CDH1-206ENST00000564676 DPF2Q92785 391 aa12.4□□□□□ -0.42
CDH1-206ENST00000564676 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
CDH1-206ENST00000564676 EYA2O00167 538 aa12.39□□□□□ -0.43
CDH1-206ENST00000564676 MS4A1P11836 297 aa12.39□□□□□ -0.43
CDH1-206ENST00000564676 RLBP1P12271 317 aa12.39□□□□□ -0.43
CDH1-206ENST00000564676 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
CDH1-206ENST00000564676 RSBN1LQ6PCB5 846 aaPredicted RBP12.39□□□□□ -0.43
CDH1-206ENST00000564676 C15orf52Q6ZUT6 534 aaKnown RBP12.39□□□□□ -0.43
CDH1-206ENST00000564676 ZNF804AQ7Z570 1209 aa12.39□□□□□ -0.43
CDH1-206ENST00000564676 CD209Q9NNX6 404 aa12.39□□□□□ -0.43
CDH1-206ENST00000564676 SHTN1A0MZ66 631 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 SRGAP3O43295 1099 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 PDE8BO95263 885 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 APLP1P51693 650 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 RBM26Q5T8P6 1007 aaKnown RBP12.38□□□□□ -0.43
CDH1-206ENST00000564676 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
CDH1-206ENST00000564676 TTLL5Q6EMB2 1281 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 SIL1Q9H173 461 aa12.38□□□□□ -0.43
CDH1-206ENST00000564676 GTF2IP78347 998 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 STRIP1Q5VSL9 837 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
CDH1-206ENST00000564676 IRS2Q9Y4H2 1338 aa12.37□□□□□ -0.43
CDH1-206ENST00000564676 CIAO1O76071 339 aa12.36□□□□□ -0.43
CDH1-206ENST00000564676 IFIT1P09914 478 aaKnown RBP12.36□□□□□ -0.43
CDH1-206ENST00000564676 HIBADHP31937 336 aaKnown RBP12.36□□□□□ -0.43
CDH1-206ENST00000564676 GYG1P46976 350 aa12.36□□□□□ -0.43
CDH1-206ENST00000564676 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
CDH1-206ENST00000564676 DACT2Q5SW24 774 aa12.36□□□□□ -0.43
CDH1-206ENST00000564676 VPS37DQ86XT2 251 aa12.36□□□□□ -0.43
CDH1-206ENST00000564676 VGLL2Q8N8G2 317 aa12.36□□□□□ -0.43
CDH1-206ENST00000564676 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
CDH1-206ENST00000564676 MXD3Q9BW11 206 aa12.36□□□□□ -0.43
CDH1-206ENST00000564676 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
CDH1-206ENST00000564676 A0A1B0GUL6 1792 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 ZBTB7BO15156 539 aaPredicted RBP12.35□□□□□ -0.43
CDH1-206ENST00000564676 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 SLC5A1P13866 664 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 IL1R1P14778 569 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
CDH1-206ENST00000564676 HIRAP54198 1017 aaPredicted RBP12.35□□□□□ -0.43
CDH1-206ENST00000564676 MTX1Q13505 466 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
CDH1-206ENST00000564676 CAVIN4Q5BKX8 364 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 FAM84BQ96KN1 310 aaPredicted RBP12.35□□□□□ -0.43
CDH1-206ENST00000564676 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
CDH1-206ENST00000564676 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
CDH1-206ENST00000564676 FRAT2O75474 233 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms